CN184796

Overview
NameCN184796
Unique NameCN184796
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_CAMJE (Adenine phosphoribosyltransferase OS=Campylobacter jejuni GN=apt PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 8.250e-34
Identity = 75/156 (48.08%), Postives = 99/156 (63.46%), Query Frame = 1
Query:  262 AIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQ--AGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 723
            +IR+IPDFPK GI+F+DITTLL + +A    +    ERYKD N+  +AG E+RGFIF   I   +   FVP+RKP KLP E  S EY LEYG D +E+H  A +     R L+VDDL+ATGGT  A+  L+++ G   VE   +I L +L G  +L
Sbjct:   15 SIRIIPDFPKKGIIFRDITTLLNNKEALNFLLKHLKERYKDYNLDFIAGTESRGFIFASMICAKLNLPFVPIRKPGKLPFETFSCEYDLEYGSDKVELHKDAFKNIQNARVLLVDDLIATGGTAIASYELIQKAGAKCVEACFLINLKDLNGANKL 170          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_STRMU (Adenine phosphoribosyltransferase OS=Streptococcus mutans GN=apt PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.077e-33
Identity = 72/157 (45.86%), Postives = 100/157 (63.69%), Query Frame = 1
Query:  253 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 723
            + + I  I D+P+ G+ F+DI+ L+ +  A+   I   V+   DK I ++ G EARGFI G P+A  +G  F P+RKP KLP EVI   Y  EYG D + MH  A++ G+R LIVDDL+ATGGT+ A I ++ER+G  V  CA +IEL  L GR+ +
Sbjct:    3 LKNYIATIEDYPQEGVTFRDISPLMANGNAYSYAIREIVQYATDKKIDMIVGPEARGFIVGCPVAYELGVGFAPVRKPGKLPREVIEAHYEKEYGIDTLTMHADAIKPGQRVLIVDDLLATGGTVKATIEMIERLGGIVAGCAFLIELDGLDGRQAI 159          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_STACT (Adenine phosphoribosyltransferase OS=Staphylococcus carnosus (strain TM300) GN=apt PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.077e-33
Identity = 74/160 (46.25%), Postives = 106/160 (66.25%), Query Frame = 1
Query:  274 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS 753
            + D+PK G+ F+DITT++ + +A+    D  VE  ++K + +V G EARGFI G P+A ++G  F P+RK  KLP EVI  EY LEYG +V+ MH  A++ G+R LI DDL+ATGGT+ A I+L+E +G  VV  A +IEL  L G ++L    +  L+S
Sbjct:   10 VQDWPKEGVDFKDITTIMDNGEAYGYATDQIVEFAREKEVDIVVGPEARGFIIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLTMHKDAIKPGQRVLITDDLLATGGTIEATIKLVEELGGIVVGIAFIIELKYLHGIDKLDGYDVLSLIS 169          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_SALTO (Adenine phosphoribosyltransferase OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=apt PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.077e-33
Identity = 75/167 (44.91%), Postives = 102/167 (61.08%), Query Frame = 1
Query:  253 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS 753
            ++S +  +PDFPKPG+MF+D+  L  D  AFR+ ID  V  +   +   V GIEARGF+    IA A G   VP+RK  KLP    S  Y+LEYG+  +E+H  A  AG R L+VDD++ATGGT  A + L+ER G  V     ++EL  L GRERL  +P+  L++
Sbjct:   21 VASRVLDVPDFPKPGVMFKDLMPLFSDGDAFREVIDDIVRYHGRDSFDTVVGIEARGFVVAAAIAYAAGVGVVPVRKAGKLPRVAYSASYALEYGEATLEVHQDAFTAGHRVLVVDDVLATGGTAEATLDLVERAGGTVAGFTVLLELGFLGGRERLTPRPVHALLT 187          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_METI4 (Adenine phosphoribosyltransferase OS=Methylacidiphilum infernorum (isolate V4) GN=apt PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.077e-33
Identity = 72/169 (42.60%), Postives = 106/169 (62.72%), Query Frame = 1
Query:  244 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 750
            I  +   IR IPDFP+PG+MF+DIT  + + + FR  + +F+ RY+ K I  +A I+ARGFIF   +A A+G   +P+RK  KLP +     Y  EYG++V+ +H  A+  GE  LIVDD++ATG T   A  L+E+ G +++E   + EL  LKGRERL   P + ++
Sbjct:    9 IERLKEKIRTIPDFPRPGVMFKDITPAIGEGQFFRLILTIFIARYQKKKIDKIAAIDARGFIFAGALAHALGVGIIPIRKKGKLPYKTYELHYKSEYGEEVLTIHQDAISKGENILIVDDVLATGNTARTAALLVEKCGGNLMELGFLAELSNLKGRERLFPFPCYSIL 177          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_FRASN (Adenine phosphoribosyltransferase OS=Frankia sp. (strain EAN1pec) GN=apt PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.077e-33
Identity = 76/160 (47.50%), Postives = 101/160 (63.12%), Query Frame = 1
Query:  247 AGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG 726
            A + + +R + DFPKPG++F+DIT LL    AF   +    +  +    + +AGIEARGF+   P+A  +GA  VP+RK  KLPG   SE Y+LEYG  V+E+H  AV  GER LIVDD++ATGGT +AA  LL   G  VV  A ++EL  L GR+R G
Sbjct:   15 AVLGAHVRDVMDFPKPGVVFKDITPLLSTPAAFGVVVGALADLARGLGATTIAGIEARGFLLAAPVADRVGAGIVPIRKQGKLPGRTRSEAYALEYGTAVLEIHEDAVPTGERVLIVDDVLATGGTAAAAHTLLRGCGADVVGLAVLMELTFLSGRDRTG 174          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_FRAP2 (Adenine phosphoribosyltransferase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=apt PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.077e-33
Identity = 75/159 (47.17%), Postives = 99/159 (62.26%), Query Frame = 1
Query:  253 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNI--SVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 723
            I   I  +PDFPKPGI+F+DIT LL D +  + T     E  K K I  +V+AG E+RGFIFG  +A  +G  FVP+RKP KLP E     Y LEYG D +E+H  A +  ++ L+VDDL+ATGGT  A ++L+E+    V     VIEL +L GR+ L
Sbjct:    6 IKDRIVAVPDFPKPGIVFRDITPLLADPQGLKMTAKAMAEELKSKGIKPTVIAGTESRGFIFGVALAEVLGLGFVPVRKPGKLPRETYKVSYQLEYGSDSLEIHKDAFKPTDKVLVVDDLLATGGTAKATVQLIEKTQASVAGLIFVIELEDLNGRKVL 164          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_EXIS2 (Adenine phosphoribosyltransferase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=apt PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.077e-33
Identity = 70/153 (45.75%), Postives = 105/153 (68.63%), Query Frame = 1
Query:  265 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 723
            I+ + ++PK GI F+DIT+L+ +  A++ ++D  ++  + +   V+AG EARGF+ G P A A+   FVP+RK  KLP E +  EY LEYGKDV+ MH  A+Q G+R +I+DDL+ATGGT+ A I+++E++G  V     +IEL  L GRE+L
Sbjct:    7 IKEVENWPKEGISFKDITSLMQNGPAYKQSVDALIDYARKQGADVIAGPEARGFVVGCPAAYAMEIGFVPVRKEGKLPRETVRVEYGLEYGKDVLTMHHDAIQPGQRVVILDDLLATGGTIEATIKMIEQLGGTVAGIGFLIELDGLGGREKL 159          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_BACSK (Adenine phosphoribosyltransferase OS=Bacillus clausii (strain KSM-K16) GN=apt PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.077e-33
Identity = 72/163 (44.17%), Postives = 107/163 (65.64%), Query Frame = 1
Query:  265 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS 753
            I ++ D+P+ GI F+DITTL+ +  A++  ++      K+K   V+ G EARGF+ G PIA  +   FVP+RK  KLP EVI   Y LEYGKD + +H  ++Q G+R +I DDL+ATGGT+ A  +++E++G  VV  A +IEL  + GR++L +  LF L+S
Sbjct:    7 ITIVEDWPQEGIRFKDITTLMQNGTAYKRAVEELAVYAKEKQADVIVGPEARGFVVGCPIATELEIGFVPVRKKGKLPREVIEANYGLEYGKDCLTIHKDSIQPGQRVVITDDLLATGGTIEATAKMVEQLGGKVVGIAFLIELAYIGGRDKLKQYDLFSLMS 169          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_STRGB (Adenine phosphoribosyltransferase OS=Streptomyces galbus GN=apt PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.407e-33
Identity = 74/157 (47.13%), Postives = 100/157 (63.69%), Query Frame = 1
Query:  253 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 723
            ++S IR + D+P+PG+MF+DIT LL D  AF    D      +    + V G+EARGFI G P+A+  G  F+P+RK  KLPG  +S+ Y LEYG   +E+H   + AG+R LIVDD++ATGGT  AAI+L+ R G  V   A ++EL  L GR RL
Sbjct:   11 LASRIRDVADYPEPGVMFKDITPLLADPVAFTALTDTLAAGRRRHPRTKVVGLEARGFILGAPVAVRAGLGFIPVRKAGKLPGATLSQAYDLEYGSAEIEVHAEDLAAGDRVLIVDDVLATGGTAEAAIQLIRRAGAEVCGLAVLMELGFLGGRARL 167          
The following BLAST results are available for this feature:
BLAST of CN184796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_CAMJE8.250e-3448.08Adenine phosphoribosyltransferase OS=Campylobacter... [more]
APT_STRMU1.077e-3345.86Adenine phosphoribosyltransferase OS=Streptococcus... [more]
APT_STACT1.077e-3346.25Adenine phosphoribosyltransferase OS=Staphylococcu... [more]
APT_SALTO1.077e-3344.91Adenine phosphoribosyltransferase OS=Salinispora t... [more]
APT_METI41.077e-3342.60Adenine phosphoribosyltransferase OS=Methylacidiph... [more]
APT_FRASN1.077e-3347.50Adenine phosphoribosyltransferase OS=Frankia sp. (... [more]
APT_FRAP21.077e-3347.17Adenine phosphoribosyltransferase OS=Francisella p... [more]
APT_EXIS21.077e-3345.75Adenine phosphoribosyltransferase OS=Exiguobacteri... [more]
APT_BACSK1.077e-3344.17Adenine phosphoribosyltransferase OS=Bacillus clau... [more]
APT_STRGB1.407e-3347.13Adenine phosphoribosyltransferase OS=Streptomyces ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006B23_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006B23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184796 ID=CN184796; Name=CN184796; organism=Citrus sinensis; type=EST; length=763bp
GAGGAAGGCGTGATGCATGCTGCAGCTTCACTTCTTAACTCTTCAAACCT
CTCCCTTCGCTTTGCATCTCAAACGCAGACACGACTCTCTCCCTGGATCG
CCGCTCCCTCCTCTGTTCGCCTACCGTTGAACCGCTCGCAAAATTACAGA
ATTGCACTCCCTCCTCTGCATTCCACCGTGAGTGGTGACTCGACGCAACC
TCAACAAATGGCTTCAGCTGACGTAAAAGCACAAGACCCTCGAATCGCTG
GGATTTCCTCAGCAATTCGTGTCATCCCAGACTTCCCTAAACCAGGGATT
ATGTTTCAAGATATCACAACATTGCTTCTTGATACCAAGGCTTTTAGAGA
TACTATTGATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCTGTTG
TTGCAGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTG
GCTATTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGG
GGAGGTTATTTCCGAAGAGTATTCCTTGGAATATGGAAAAGATGTAATGG
AGATGCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGAC
GATCTAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGGCTACTTGA
GCGAGTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGAACTGCCAG
AGCTAAAGGGTCGGGAACGGCTGGGAGAGAAACCACTATTTGTTCTTGTA
AGCTAAACTTGAC
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