CN184793
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRF_THEP3 (Ribosome-recycling factor OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=frr PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.258e-14 Identity = 38/67 (56.72%), Postives = 51/67 (76.12%), Query Frame = -2 Query: 184 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 384 ERRKEL K+V K+AEE KVAVR IRRDA A +K++K ++SED K ++QKLTD+Y+K+ID + Sbjct: 107 ERRKELVKLVHKKAEEAKVAVRQIRRDANDAVKKMEKNGEISEDERKKREEEIQKLTDKYIKEIDKV 173
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRF_GEOTN (Ribosome-recycling factor OS=Geobacillus thermodenitrificans (strain NG80-2) GN=frr PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.258e-14 Identity = 36/70 (51.43%), Postives = 54/70 (77.14%), Query Frame = -2 Query: 175 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 384 ERR+EL+K+V K +EE KVAVRNIRRDA +KL+K +++ED ++ + ++QKLTD ++ KID+I K+ Sbjct: 108 ERRRELAKLVKKYSEEAKVAVRNIRRDANDELKKLEKNSEITEDELRSYTDEVQKLTDSHIAKIDAITKE 177
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRF_SYNP2 (Ribosome-recycling factor OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=frr PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.264e-14 Identity = 37/69 (53.62%), Postives = 47/69 (68.12%), Query Frame = -2 Query: 178 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 384 ERR+EL K K AEEGKVA+RNIRRDA+ K +K +SED + L D+QK+TDE+ KID + K Sbjct: 105 ERRQELVKTAGKLAEEGKVALRNIRRDAIDDVRKQEKNSDISEDESRSLQDDIQKVTDEFTTKIDDLLK 173
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRF_SHEAM (Ribosome-recycling factor OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=frr PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.264e-14 Identity = 33/67 (49.25%), Postives = 55/67 (82.09%), Query Frame = -2 Query: 184 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 384 ERR++L KVV +AE+G+VA+RN+RRDA ++++L+KEK+ +ED+V+ ++QK+TD ++KKID + Sbjct: 108 ERRRDLVKVVRAEAEQGRVAIRNVRRDANSSFKQLEKEKECTEDDVRRSEEEVQKITDLHIKKIDEL 174
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRF_DESVV (Ribosome-recycling factor OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=frr PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.264e-14 Identity = 36/65 (55.38%), Postives = 49/65 (75.38%), Query Frame = -2 Query: 190 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 384 ERRK+L K+ K AEE KVAVRN+RRDA + +KL+K K+LSED+++ D+QKLTD ++ K D Sbjct: 109 ERRKDLGKMARKYAEEAKVAVRNVRRDANEQLKKLEKNKELSEDDLRKAQEDVQKLTDRFVAKTD 173
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRF_DESVH (Ribosome-recycling factor OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=frr PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.264e-14 Identity = 36/65 (55.38%), Postives = 49/65 (75.38%), Query Frame = -2 Query: 190 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 384 ERRK+L K+ K AEE KVAVRN+RRDA + +KL+K K+LSED+++ D+QKLTD ++ K D Sbjct: 109 ERRKDLGKMARKYAEEAKVAVRNVRRDANEQLKKLEKNKELSEDDLRKAQEDVQKLTDRFVAKTD 173
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRF_BACHD (Ribosome-recycling factor OS=Bacillus halodurans GN=frr PE=3 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 7.264e-14 Identity = 36/65 (55.38%), Postives = 54/65 (83.08%), Query Frame = -2 Query: 190 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 384 ERR++L+K+V K AEE KVAVRNIRRDA +K QK+ +L+ED+++ ++ D+QKLTD+Y+++ID Sbjct: 108 ERRRDLTKLVKKSAEEAKVAVRNIRRDANDDLKKRQKDGELTEDDLRRVTEDVQKLTDKYIEQID 172
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRF_SHESW (Ribosome-recycling factor OS=Shewanella sp. (strain W3-18-1) GN=frr PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.487e-14 Identity = 34/67 (50.75%), Postives = 50/67 (74.63%), Query Frame = -2 Query: 184 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 384 ERRK+ KVV +AE G+VA+RN+RRDA+ +KL+K K+ +ED+V+ D+QK TD ++KK+D I Sbjct: 108 ERRKDFIKVVRAEAEGGRVAIRNVRRDAISEVKKLEKAKECTEDDVRRFEDDVQKFTDAHIKKVDEI 174
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRF_SHEPC (Ribosome-recycling factor OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=frr PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.487e-14 Identity = 34/67 (50.75%), Postives = 50/67 (74.63%), Query Frame = -2 Query: 184 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 384 ERRK+ KVV +AE G+VA+RN+RRDA+ +KL+K K+ +ED+V+ D+QK TD ++KK+D I Sbjct: 108 ERRKDFIKVVRAEAEGGRVAIRNVRRDAISEVKKLEKAKECTEDDVRRFEDDVQKFTDAHIKKVDEI 174
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRF_MICAN (Ribosome-recycling factor OS=Microcystis aeruginosa (strain NIES-843) GN=frr PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.487e-14 Identity = 36/67 (53.73%), Postives = 50/67 (74.63%), Query Frame = -2 Query: 184 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 384 +RRKEL K+ AK AEEGKVA+RNIRRDA+ A K +K ++SED +DL +QK TD+++ KI+ + Sbjct: 105 DRRKELVKLAAKLAEEGKVAIRNIRRDAIDAIRKREKGHEISEDESRDLQDQVQKSTDKFIAKIEDL 171 The following BLAST results are available for this feature:
BLAST of CN184793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 443
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184793 ID=CN184793; Name=CN184793; organism=Citrus sinensis; type=EST; length=385bpback to top |