CN184793
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRF_BUCA5 (Ribosome-recycling factor OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=frr PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.407e-11 Identity = 33/70 (47.14%), Postives = 48/70 (68.57%), Query Frame = -2 Query: 175 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 384 ERRK+L KV+ AE ++ +RNIRRDA ++L K+K +SEDN S +Q +T+EY+KKID I ++ Sbjct: 108 ERRKQLIKVIRGDAESSRIQIRNIRRDANDKVKRLLKDKIISEDNEHTSQSKIQIMTNEYIKKIDCILEK 177
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRF_BREBN (Ribosome-recycling factor OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=frr PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.407e-11 Identity = 33/69 (47.83%), Postives = 46/69 (66.67%), Query Frame = -2 Query: 178 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 384 ERRKEL K+ K EE KVA+RNIRRDA +KL+K +SED+ + +QK TD+++ ++D I K Sbjct: 108 ERRKELVKLAGKGGEEAKVAIRNIRRDANDEIKKLEKAATISEDDSRRHQETIQKTTDKFIAEVDKIVK 176
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRF_ALISL (Ribosome-recycling factor OS=Aliivibrio salmonicida (strain LFI1238) GN=frr PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.407e-11 Identity = 34/67 (50.75%), Postives = 47/67 (70.15%), Query Frame = -2 Query: 184 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 384 ERRK L K+V +AE G+VAVRNIRRDA + L K+K++SED+ + ++QKLTD +K ID + Sbjct: 108 ERRKSLVKIVRGEAENGRVAVRNIRRDANGDIKALLKDKEISEDDDRRTQDEIQKLTDIAVKNIDDV 174
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRF_ACIBY (Ribosome-recycling factor OS=Acinetobacter baumannii (strain AYE) GN=frr PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.407e-11 Identity = 29/65 (44.62%), Postives = 46/65 (70.77%), Query Frame = -2 Query: 190 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 384 E R+++ K+ +AE KVA+RNIRRD L + L KEK++SED+ + D+QK+TD+Y+ ++D Sbjct: 107 ETRRDMQKIARSEAENAKVAIRNIRRDVLGDIKALLKEKEISEDDERRAGDDIQKITDKYVAEVD 171
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRF_ACIBT (Ribosome-recycling factor OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=frr PE=3 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 4.407e-11 Identity = 29/65 (44.62%), Postives = 46/65 (70.77%), Query Frame = -2 Query: 190 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 384 E R+++ K+ +AE KVA+RNIRRD L + L KEK++SED+ + D+QK+TD+Y+ ++D Sbjct: 107 ETRRDMQKIARSEAENAKVAIRNIRRDVLGDIKALLKEKEISEDDERRAGDDIQKITDKYVAEVD 171
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRF_ACIBS (Ribosome-recycling factor OS=Acinetobacter baumannii (strain SDF) GN=frr PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.407e-11 Identity = 29/65 (44.62%), Postives = 46/65 (70.77%), Query Frame = -2 Query: 190 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 384 E R+++ K+ +AE KVA+RNIRRD L + L KEK++SED+ + D+QK+TD+Y+ ++D Sbjct: 107 ETRRDMQKIARSEAENAKVAIRNIRRDVLGDIKALLKEKEISEDDERRAGDDIQKITDKYVAEVD 171
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRF_ACIB5 (Ribosome-recycling factor OS=Acinetobacter baumannii (strain AB0057) GN=frr PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.407e-11 Identity = 29/65 (44.62%), Postives = 46/65 (70.77%), Query Frame = -2 Query: 190 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 384 E R+++ K+ +AE KVA+RNIRRD L + L KEK++SED+ + D+QK+TD+Y+ ++D Sbjct: 107 ETRRDMQKIARSEAENAKVAIRNIRRDVLGDIKALLKEKEISEDDERRAGDDIQKITDKYVAEVD 171
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRF_ACIB3 (Ribosome-recycling factor OS=Acinetobacter baumannii (strain AB307-0294) GN=frr PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.407e-11 Identity = 29/65 (44.62%), Postives = 46/65 (70.77%), Query Frame = -2 Query: 190 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 384 E R+++ K+ +AE KVA+RNIRRD L + L KEK++SED+ + D+QK+TD+Y+ ++D Sbjct: 107 ETRRDMQKIARSEAENAKVAIRNIRRDVLGDIKALLKEKEISEDDERRAGDDIQKITDKYVAEVD 171
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRF_STAS1 (Ribosome-recycling factor OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=frr PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.755e-11 Identity = 31/70 (44.29%), Postives = 50/70 (71.43%), Query Frame = -2 Query: 175 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 384 ERRKEL K V K E+ KVAVRN+RRD+ +K QK ++ED+++ + D+QKLTD+ +K+++ + ++ Sbjct: 107 ERRKELVKDVKKIGEDAKVAVRNVRRDSNDELKKQQKNSDITEDDLRTQTDDVQKLTDDSIKEVEKLLEE 176
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRF_STACT (Ribosome-recycling factor OS=Staphylococcus carnosus (strain TM300) GN=frr PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.755e-11 Identity = 32/70 (45.71%), Postives = 49/70 (70.00%), Query Frame = -2 Query: 175 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 384 ERRKEL K V K E KV++RNIRRD+ +K +KE +SED ++ + D+QK+TDE +K++D + ++ Sbjct: 107 ERRKELVKDVKKMGENAKVSIRNIRRDSNDDLKKDEKEGVISEDELRTGTDDVQKITDESIKEVDKVLEE 176 The following BLAST results are available for this feature:
BLAST of CN184793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 443
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184793 ID=CN184793; Name=CN184793; organism=Citrus sinensis; type=EST; length=385bpback to top |