CN184793
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRF_THERP (Ribosome-recycling factor OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=frr PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.517e-11 Identity = 33/70 (47.14%), Postives = 49/70 (70.00%), Query Frame = -2 Query: 175 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 384 ERR++L K+V ++ EE KVA+RNIRRDAL ++L K K++SED+ + LQ LT+ Y+ + D + KQ Sbjct: 108 ERRRQLVKLVHEEVEETKVAIRNIRRDALADIKELLKNKEISEDDERRAEQRLQDLTNRYIAEADKLGKQ 177
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRF_RHOPT (Ribosome-recycling factor OS=Rhodopseudomonas palustris (strain TIE-1) GN=frr PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.517e-11 Identity = 33/67 (49.25%), Postives = 46/67 (68.66%), Query Frame = -2 Query: 184 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 384 ERRKEL KV K AE +VAVR++RRD L +KL+K ++SED+ K L ++QK TD + +ID + Sbjct: 109 ERRKELVKVAHKYAEAARVAVRHVRRDGLDTIKKLEKAHEISEDDQKRLDQEVQKATDAAIAEIDQL 175
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRF_RHOPA (Ribosome-recycling factor OS=Rhodopseudomonas palustris GN=frr PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.517e-11 Identity = 33/67 (49.25%), Postives = 46/67 (68.66%), Query Frame = -2 Query: 184 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 384 ERRKEL KV K AE +VAVR++RRD L +KL+K ++SED+ K L ++QK TD + +ID + Sbjct: 109 ERRKELVKVAHKYAEAARVAVRHVRRDGLDTIKKLEKAHEISEDDQKRLDQEVQKATDAAIAEIDQL 175
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRF_RHOP2 (Ribosome-recycling factor OS=Rhodopseudomonas palustris (strain HaA2) GN=frr PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.517e-11 Identity = 32/67 (47.76%), Postives = 46/67 (68.66%), Query Frame = -2 Query: 184 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 384 +RRKEL KV K AE +VAVR++RRD L +KL+K ++SED+ K L ++QK TD + +ID + Sbjct: 110 DRRKELVKVAHKYAEAARVAVRHVRRDGLDTIKKLEKSHEISEDDQKRLDQEVQKATDSAISEIDQL 176
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRF_PSYA2 (Ribosome-recycling factor OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=frr PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.517e-11 Identity = 29/66 (43.94%), Postives = 48/66 (72.73%), Query Frame = -2 Query: 187 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 384 E R+++ K+ +AE +V++RNIRRD + ++L KEK++SED+ S D+QK+TD+Y++ IDS Sbjct: 107 ETRRDMQKLARGEAENSRVSIRNIRRDMMNDIKELAKEKEISEDDEHRASDDIQKITDKYIETIDS 172
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRF_POLNA (Ribosome-recycling factor OS=Polaromonas naphthalenivorans (strain CJ2) GN=frr PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.517e-11 Identity = 31/67 (46.27%), Postives = 45/67 (67.16%), Query Frame = -2 Query: 184 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 384 ERRKEL+KVV + E KVA+RN+RRDA +KL K+K SED+ + ++QK TD ++ +D + Sbjct: 109 ERRKELTKVVRAEGEHAKVAIRNLRRDANDGVKKLVKDKLASEDDERRSQEEIQKFTDRFIADVDKL 175
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRF_LEPCP (Ribosome-recycling factor OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=frr PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.517e-11 Identity = 34/67 (50.75%), Postives = 47/67 (70.15%), Query Frame = -2 Query: 184 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 384 ERRKEL+KVV E+ KVAVRN+RRDA +KL K+K +SED+ + ++QKLTD + +ID + Sbjct: 109 ERRKELTKVVRHAGEDSKVAVRNLRRDANDQAKKLLKDKLISEDDERRSVDEVQKLTDRVIAEIDRL 175
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRF_HELPY (Ribosome-recycling factor OS=Helicobacter pylori GN=frr PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.517e-11 Identity = 33/69 (47.83%), Postives = 46/69 (66.67%), Query Frame = -2 Query: 178 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 384 E+RK ++K E+ KVAVRNIR+DA +KL+K+K++SED K +QK+TDE +KKID K Sbjct: 108 EQRKLIAKDAKAMGEKAKVAVRNIRQDANNQVKKLEKDKEISEDESKKAQEQIQKITDEAIKKIDESVK 176
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRF_HELPH (Ribosome-recycling factor OS=Helicobacter pylori (strain HPAG1) GN=frr PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.517e-11 Identity = 33/69 (47.83%), Postives = 46/69 (66.67%), Query Frame = -2 Query: 178 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 384 E+RK ++K E+ KVAVRNIR+DA +KL+K+K++SED K +QK+TDE +KKID K Sbjct: 108 EQRKLIAKDAKAMGEKAKVAVRNIRQDANNKVKKLEKDKEISEDESKKAQEQIQKITDEAIKKIDESVK 176
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRF_HELP2 (Ribosome-recycling factor OS=Helicobacter pylori (strain P12) GN=frr PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.517e-11 Identity = 33/69 (47.83%), Postives = 46/69 (66.67%), Query Frame = -2 Query: 178 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 384 E+RK ++K E+ KVAVRNIR+DA +KL+K+K++SED K +QK+TDE +KKID K Sbjct: 108 EQRKLIAKDAKAMGEKAKVAVRNIRQDANNQVKKLEKDKEISEDESKKAQEQIQKITDEAIKKIDESVK 176 The following BLAST results are available for this feature:
BLAST of CN184793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 443
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184793 ID=CN184793; Name=CN184793; organism=Citrus sinensis; type=EST; length=385bpback to top |