CN184790

Overview
NameCN184790
Unique NameCN184790
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length514
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6025 contig Csv1_Contig6025:1068..1581. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184790 vs. ExPASy Swiss-Prot
Match: MYCT_HUMAN (Proton myo-inositol cotransporter OS=Homo sapiens GN=SLC2A13 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 3.073e-12
Identity = 34/85 (40.00%), Postives = 54/85 (63.53%), Query Frame = -1
Query:    2 AISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYASIASVAWVFFYTC 256
            A+  ++ Y+ FF+ GMGP+ W  +SEI PL  R+ G +    +N + + +VS+TFL  ++ +T  G+FFLYA  A+V  +F Y C
Sbjct:  490 ALLGLILYLVFFAPGMGPMPWTVNSEIYPLWARSTGNACSSGINWIFNVLVSLTFLHTAEYLTYYGAFFLYAGFAAVGLLFIYGC 574          
BLAST of CN184790 vs. ExPASy Swiss-Prot
Match: STP11_ARATH (Sugar transport protein 11 OS=Arabidopsis thaliana GN=STP11 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.013e-12
Identity = 46/181 (25.41%), Postives = 83/181 (45.86%), Query Frame = -1
Query:    8 VVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIG-------------LAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYASIASVAWVFFY 511
            ++ Y+P +F+  G  + D  L++ V  G V  +  +V+ + +DK GRR L L     MI +   +   +           W  G             + ++ +  YVA F+   GP+ W+  SEI PL++R+ G S+ V VN   +  +   FL++   +   G F+ +A +  +  +F Y
Sbjct:  304 IMFYAPVLFKTIGFGN-DASLISAVITGLVNVLSTIVSIYSVDKFGRRALFLQGGFQMIVTQIAVGSMIG----------WKFGFNGEGNLSGVDADIILALICLYVAGFAWSWGPLGWLVPSEICPLEIRSAGQSLNVSVNMFFTFFIGQFFLTMLCHMKF-GLFYFFAGMVLIMTIFIY 472          
BLAST of CN184790 vs. ExPASy Swiss-Prot
Match: HUP3_CHLKE (H(+)/hexose cotransporter 3 OS=Chlorella kessleri GN=HUP3 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.013e-12
Identity = 52/160 (32.50%), Postives = 80/160 (50.00%), Query Frame = -1
Query:   50 AVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQ----SHKKMIWAIGLAISTVLS-YVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFF 514
            A++ Y P +F   G ASS   LL TV VG V     ++A  L DK GRR LL+    G+   LA LA  +T+  +      + +   +   +  V+  ++A F+   GP+ W+  SEI  L+ R  G ++ VM N + S V+   F+S+  A+  G   F
Sbjct:  305 AIIFYVPVLFSSLGSASS-AALLNTVVVGAVNVGSTMIAVLLSDKFGRRFLLIEG--GITCCLAMLAAGITLGVEFGQYGTEDLPHPVSAGVLAVICIFIAGFAWSWGPMGWLIPSEIFTLETRPAGTAVAVMGNFLFSFVIGQAFVSMLCAMKFGVFLF 461          
BLAST of CN184790 vs. ExPASy Swiss-Prot
Match: STP12_ARATH (Sugar transport protein 12 OS=Arabidopsis thaliana GN=STP12 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.241e-12
Identity = 49/172 (28.49%), Postives = 85/172 (49.42%), Query Frame = -1
Query:    8 VVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTV---IDQSHKKMI-WAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYASIASVAWVFFY 511
            ++ Y+P +F+  G  S D  L++ V  G V     +V+ + +DK GRR L L     M+ S   +A ++     +D +   +  W   + +  +  YVA F+   GP+ W+  SEI PL++R+   SI V VN + + +++  FL +   +   G F  +A    V  +F Y
Sbjct:  300 IMFYAPVLFQTIGFGS-DAALISAVVTGLVNVGATVVSIYGVDKWGRRFLFLEGGFQMLISQVAVAAAIGAKFGVDGTPGVLPKWYAIVVVLFICIYVAAFAWSWGPLGWLVPSEIFPLEIRSAAQSITVSVNMIFTFLIAQVFLMMLCHLKF-GLFIFFAFFVVVMSIFVY 469          
BLAST of CN184790 vs. ExPASy Swiss-Prot
Match: STP6_ARATH (Sugar transport protein 6 OS=Arabidopsis thaliana GN=STP6 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.168e-11
Identity = 50/177 (28.25%), Postives = 82/177 (46.33%), Query Frame = -1
Query:    8 AVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIG--------LAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYASIASVAWVFFY 514
            A++ Y+P +F+  G  S D  LL+ V  G +  +   V  +L+D+ GRR LLL S   M+     + I L        K +   G        + +  V  YV  F+   GP+ W+  SE  PL+ R+ G ++ V  N   + V++  FLS+   +   G FF ++    V  +F +
Sbjct:  297 AIMFYAPVLFQTVGFGS-DAALLSAVITGSINVLATFVGIYLVDRTGRRFLLLQSSVHMLICQLIIGIILA-------KDLGVTGTLGRPQALVVVIFVCVYVMGFAWSWGPLGWLIPSETFPLETRSAGFAVAVSCNMFFTFVIAQAFLSMLCGMR-SGIFFFFSGWIIVMGLFAF 464          
BLAST of CN184790 vs. ExPASy Swiss-Prot
Match: STA_RICCO (Sugar carrier protein A OS=Ricinus communis GN=STA PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.168e-11
Identity = 53/171 (30.99%), Postives = 85/171 (49.71%), Query Frame = -1
Query:    8 VVLYSPRIFEKAGIASSDKKLLATVAVGFV--KTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIG-LAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYASIASVAWVFFY 511
            ++ Y+P +F+  G   +   L ++   G V   + FI +AT  +D++GRR LL+S    MI     +AI L V    ++++  +   L +  +  +V  F    GP+ W   SEI PL+ R+ G SI V VN   + V++ +F SL  A    G F  +A   +V   F Y
Sbjct:  304 ILFYAPPLFQSMGFGGN-AALYSSAVTGAVLCSSTFISIAT--VDRLGRRFLLISGGIQMITCQVIVAIILGVKFGDNQQLSKSFSVLVVIMICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQSFPSLLCAFKF-GIFLFFAGWVTVMTAFVY 470          
BLAST of CN184790 vs. ExPASy Swiss-Prot
Match: GTR14_HUMAN (Solute carrier family 2, facilitated glucose transporter member 14 OS=Homo sapiens GN=SLC2A14 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.168e-11
Identity = 51/171 (29.82%), Postives = 84/171 (49.12%), Query Frame = -1
Query:   11 AVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYAS---IASVAWVFF 514
            AV  YS  IF+ AG+    + + AT++ G V TIF L++ FL+++ GRR L +  + GM      + +SL + +  +      IG     +L +VA F IG GPI W   +E+     R    ++    N  ++ +V + F   S A  +G   F+  +   I  +A+ FF
Sbjct:  311 AVFYYSTGIFKDAGV---QQPIYATISAGVVNTIFTLLSLFLVERAGRRTLHMIGLGGMAFCSTLMTVSLLLKNHYNGMSFVCIG----AILVFVACFEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGLLF--PSAAYYLGAYVFIIFTGFLITFLAFTFF 472          
BLAST of CN184790 vs. ExPASy Swiss-Prot
Match: STC_RICCO (Sugar carrier protein C OS=Ricinus communis GN=STC PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.525e-11
Identity = 47/172 (27.33%), Postives = 83/172 (48.26%), Query Frame = -1
Query:    8 VVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTV---IDQSHKKMI-WAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYASIASVAWVFFY 511
            ++ Y+P +F+  G  S D  L++ V  G V     +V+ + +DK GRR L L     M+   A +A  +     +D +   +  W   + +  +  YV+ F+   GP+ W+  SEI PL++R+   S+ V VN   + VV+  FL +   +   G F  ++    +  +F Y
Sbjct:  304 IMFYAPVLFDTIGFGS-DAALMSAVITGLVNVFATMVSIYGVDKWGRRFLFLEGGVQMLICQAIVAACIGAKFGVDGAPGDLPQWYAVVVVLFICIYVSGFAWSWGPLGWLVPSEIFPLEIRSAAQSVNVSVNMFFTFVVAQVFLIMLCHLKF-GLFIFFSFFVLIMSIFVY 473          
BLAST of CN184790 vs. ExPASy Swiss-Prot
Match: MSSP3_ARATH (Monosaccharide-sensing protein 3 OS=Arabidopsis thaliana GN=MSSP3 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.525e-11
Identity = 52/174 (29.89%), Postives = 89/174 (51.15%), Query Frame = -1
Query:    8 VVLYSPRIFEKAGIASSDKKL-----LATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAI-SLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYASIASVAWVFFY 511
            V+ Y+P+I E+ G++S    L      A++ +  + T+ +L        +  R L+LS++  +I SL TL I SL  +  S   +I     + ++V  Y++ F +G G I  +  SEI P  +R    +I  +   +   +V+ T   + K+I I G F +YA + +VAWVF Y
Sbjct:  530 VMYYTPQILEETGVSSLLTNLGISAESASLLISALTTLLMLPCIL----VSMRSLMLSTIPILILSLVTLVIGSLVNLGGSINALI-----STASVTVYLSCFVMGFGAIPNILCSEIFPTSVRGLCITICALTFWICDIIVTYTLPVMLKSIGIAGVFGIYAIVCAVAWVFVY 694          
BLAST of CN184790 vs. ExPASy Swiss-Prot
Match: PLST2_ARATH (Probable plastidic glucose transporter 2 OS=Arabidopsis thaliana GN=At1g67300 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.992e-11
Identity = 48/167 (28.74%), Postives = 88/167 (52.69%), Query Frame = -1
Query:   14 AVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYASIASVAWVF 514
            AV  +S  +F+ AG+ S     L  + VG    +  ++A  L+DK+GR+ LLL S  GM A++A L +  T    S+     A+ L++   L +V  F++G GP+  +   EI P ++RA+  +  + V+ V +  V + FL L + +     + ++++   +A +F
Sbjct:  311 AVFYFSSTVFKSAGVPSD----LGNIFVGVSNLLGSVIAMVLMDKVGRKLLLLWSFIGMAAAMA-LQVGAT---SSYLPHFSALCLSVGGTLVFVLTFALGAGPVPGLLLPEIFPSRIRAKAMAFCMSVHWVINFFVGLLFLRLLEKLGPRLLYSMFSTFCLMAVMF 469          
The following BLAST results are available for this feature:
BLAST of CN184790 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
MYCT_HUMAN3.073e-1240.00Proton myo-inositol cotransporter OS=Homo sapiens ... [more]
STP11_ARATH4.013e-1225.41Sugar transport protein 11 OS=Arabidopsis thaliana... [more]
HUP3_CHLKE4.013e-1232.50H(+)/hexose cotransporter 3 OS=Chlorella kessleri ... [more]
STP12_ARATH5.241e-1228.49Sugar transport protein 12 OS=Arabidopsis thaliana... [more]
STP6_ARATH1.168e-1128.25Sugar transport protein 6 OS=Arabidopsis thaliana ... [more]
STA_RICCO1.168e-1130.99Sugar carrier protein A OS=Ricinus communis GN=STA... [more]
GTR14_HUMAN1.168e-1129.82Solute carrier family 2, facilitated glucose trans... [more]
STC_RICCO1.525e-1127.33Sugar carrier protein C OS=Ricinus communis GN=STC... [more]
MSSP3_ARATH1.525e-1129.89Monosaccharide-sensing protein 3 OS=Arabidopsis th... [more]
PLST2_ARATH1.992e-1128.74Probable plastidic glucose transporter 2 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006B19_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006B19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184790 ID=CN184790; Name=CN184790; organism=Citrus sinensis; type=EST; length=514bp
GACACGTGTAGAAAAACACCCACGCAACTGATGCAATTGACGCGTATAGA
AAGAAGGAGCCGCCAATCGTGATCGCTTTACTAAGCGATAGGAAAGTCAT
CGATACGACCCCACTTGTTACCCTGTTTACCATGACCCCGATACTCGCTC
CCTGAGCGCGTAGCTTCAACGGCAGAATCTCTGAACTGTAAACCCACGTG
ATGGGACCCATCCCGATTGAGAAAAACGCCACGTAGGATAAAACCGTTGA
GATGGCCAAACCAATAGCCCAGATCATCTTTTTGTGTGACTGATCTATGA
CTGTGAGAGAGATAGCAAGGGTCGCGAGCGAGGCGATCATGCCCGCAACA
CTGCTCAAAAGCAACGGACGCCGTCCGATTTTGTCGAGTAAAAACGTAGC
CACTAGGATGAAAATGGTCTTGACAAATCCAACGGCTACAGTAGCGAGCA
ACTTTTTGTCTGATGACGCAATCCCAGCTTTTTCAAAGATTCTAGGACTG
TACAGAACGACAGC
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