CN184783
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_SULIK (30S ribosomal protein S8P OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rps8p PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.677e-31 Identity = 65/133 (48.87%), Postives = 93/133 (69.92%), Query Frame = -1 Query: 255 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKE---IEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 644 MV V+ L +AL S+YN E R +Q +I P+SK++I L VMQK GY+GEFEY+DD R GKI V+L GR+NKCG I+PR+ + ++ + + R LPS++ G I+++TS G+M H+EA R +GG LG+ Y Sbjct: 1 MVFVNPLANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQKEGYVGEFEYIDDGRWGKITVQLLGRVNKCGPITPRYPLSYRQMIALPDYIRRYLPSKEIGIIIVSTSKGVMSHKEAARMRLGGVALGYVY 133
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_SULIA (30S ribosomal protein S8P OS=Sulfolobus islandicus (strain M.16.27) GN=rps8p PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.677e-31 Identity = 65/133 (48.87%), Postives = 93/133 (69.92%), Query Frame = -1 Query: 255 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKE---IEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 644 MV V+ L +AL S+YN E R +Q +I P+SK++I L VMQK GY+GEFEY+DD R GKI V+L GR+NKCG I+PR+ + ++ + + R LPS++ G I+++TS G+M H+EA R +GG LG+ Y Sbjct: 1 MVFVNPLANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQKEGYVGEFEYIDDGRWGKITVQLLGRVNKCGPITPRYPLSYRQMIALPDYIRRYLPSKEIGIIIVSTSKGVMSHKEAARMRLGGVALGYVY 133
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_SULAC (30S ribosomal protein S8P OS=Sulfolobus acidocaldarius GN=rps8p PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.264e-30 Identity = 63/133 (47.37%), Postives = 92/133 (69.17%), Query Frame = -1 Query: 255 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDV---GVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 644 M ++ L +AL ++YN E R +Q +I P+SK+II L VMQK GYIGEFEY+DD RAGKI+V+L GR+NKCG ISPR+ + G+ + + + LPS++ G I+++T G+M H + R+ +GG LG+ Y Sbjct: 1 MPSINPLANALATLYNNEMRRNKQALITPASKLIISVLRVMQKEGYIGEFEYIDDGRAGKIIVQLLGRINKCGPISPRYPLDYNGLLRLPDYIRKYLPSKEIGIIIISTPKGVMSHRDGIREKIGGVTLGYVY 133
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_METBU (30S ribosomal protein S8P OS=Methanococcoides burtonii (strain DSM 6242) GN=rps8p PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.264e-30 Identity = 66/130 (50.77%), Postives = 85/130 (65.38%), Query Frame = -1 Query: 255 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 644 MV + L DAL + NAE GK IRP+SK+I L VM GYIG+FE+V+D +AG VEL GR+NKCG I PR+ VGV E E W + LP++ FG ++LTT G++ EAR NVGG++L F Y Sbjct: 1 MVLLDPLADALSIIKNAEAVGKDSCTIRPASKLIGNVLKVMNDRGYIGDFEFVEDGKAGVYTVELIGRINKCGAIKPRYSVGVTEFERWEKQFLPAKNFGVLILTTPKGVISQYEARENNVGGQLLSFVY 130
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_PYRCJ (30S ribosomal protein S8P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rps8p PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.651e-30 Identity = 63/130 (48.46%), Postives = 91/130 (70.00%), Query Frame = -1 Query: 255 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 644 MV + +L++AL ++ NAE GKRQV+I P +K+I L V+Q++GY+GE EY+DD R GK VV+L G++N G I PRF V +EI W + LP+RQ G +V++TS G+M H EA+ K +GG +L + Y Sbjct: 1 MVMLDLLSNALTAIKNAEAMGKRQVVIWPVNKLIYYTLRVLQRYGYVGEIEYIDDGRGGKYVVQLLGKINDIGAIRPRFPVKYREIVEWEQKYLPARQIGILVISTSQGVMSHLEAKEKKIGGVLLAYVY 130
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_SULTO (30S ribosomal protein S8P OS=Sulfolobus tokodaii GN=rps8p PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.816e-30 Identity = 62/133 (46.62%), Postives = 95/133 (71.43%), Query Frame = -1 Query: 255 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKE---IEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 644 MV ++ L +AL ++YN E R +Q +I P+SK+II L MQK GYIGEFE++DD R+GKIVV+L GR+NKCG I+PR+ + K+ + + R LPS++ G ++++T+ G+M H++A R+ +GG LG+ Y Sbjct: 1 MVNLNPLANALTTIYNNEMRRNKQAIIMPASKLIINVLRAMQKEGYIGEFEFIDDGRSGKIVVQLLGRINKCGPIAPRYPLKYKDLLTLPDYVRRYLPSKEIGVLIISTNKGVMTHKDAIRERIGGVALGYVY 133
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_METPE (30S ribosomal protein S8P OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=rps8p PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.816e-30 Identity = 58/130 (44.62%), Postives = 89/130 (68.46%), Query Frame = -1 Query: 255 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 644 M R + + DA+ ++ NA GK + ++ PSSK++ L +MQ GYIG F+ +DD R G+ V L+GR+NKCG I+PR+ VG+ E+E W R LP + FG ++L+TS G++ H +AR+ +GG++LGF Y Sbjct: 1 MSRQNTIADAMSALKNAGDCGKPECILEPSSKLLGAMLRIMQDAGYIGSFDMIDDGRGGQFRVHLSGRINKCGAITPRYSVGLDELEYWETRYLPGKNFGLLILSTSRGVLTHNQARQNGIGGELLGFVY 130
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_THESM (30S ribosomal protein S8P OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rps8p PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.803e-30 Identity = 63/130 (48.46%), Postives = 91/130 (70.00%), Query Frame = -1 Query: 255 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 644 M + L +AL + N+EK GK +V I+P+SK+I + L VMQ++GYIGEFE++DD RAG V+L G++NK G I PRF V KE E W R LP+ +FG +V++TS G+M H+EA K +GG+++ + Y Sbjct: 1 MTLLDPLANALSHITNSEKVGKSEVYIKPASKLIGEVLRVMQENGYIGEFEFIDDGRAGIYRVQLLGKVNKAGAIKPRFSVKAKEYEKWEKRFLPAFEFGILVVSTSQGVMTHKEALEKGIGGRLIAYVY 130
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_THEGJ (30S ribosomal protein S8P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rps8p PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.803e-30 Identity = 61/130 (46.92%), Postives = 92/130 (70.77%), Query Frame = -1 Query: 255 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 644 M + L +AL + N+E+ GK++V I+P+SK+I + L VMQ++GYIGEFE++DD RAG V+L G++NK G I PRF V K E W R LP+ +FG ++++TS G+M H+EAR K +GG+++ + Y Sbjct: 1 MTLLDPLANALSHITNSERVGKKEVYIKPASKLIGEVLRVMQENGYIGEFEFIDDGRAGIYRVQLIGKINKAGAIKPRFPVKAKNYEYWEKRFLPAFEFGILIVSTSQGVMTHKEAREKGIGGRLIAYVY 130
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_THENV (30S ribosomal protein S8P OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rps8p PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.272e-30 Identity = 62/130 (47.69%), Postives = 89/130 (68.46%), Query Frame = -1 Query: 255 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 644 MV + +L++AL + NAE GKRQV I P +K+I L V+Q+HGY+GE EY+DD R GK VV+L G++N G I PR+ V +EI W + LP+RQ G +V++T+ G+M H EA+ K +GG +L + Y Sbjct: 1 MVMLDLLSNALIQIKNAEAMGKRQVAIWPVNKLIYYTLRVLQRHGYVGEVEYIDDGRGGKYVVQLLGKINDIGPIKPRYPVKYREIVQWEQKFLPARQIGILVISTNQGVMSHVEAKEKKIGGVLLAYVY 130 The following BLAST results are available for this feature:
BLAST of CN184783 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184783 ID=CN184783; Name=CN184783; organism=Citrus sinensis; type=EST; length=704bpback to top |