CN184783
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_METKA (30S ribosomal protein S8P OS=Methanopyrus kandleri GN=rps8p PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.935e-29 Identity = 59/130 (45.38%), Postives = 88/130 (67.69%), Query Frame = -1 Query: 255 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 644 M + L DA+ ++ N E G ++ +I P+SK+I + L VMQ++GYIG FE++DD R+GK +V+L GR+N CGVI PR V E E W R LP+R FG +++TT G+M H EA+ + +GG++L + Y Sbjct: 1 MTLMDPLADAMATIKNNEMVGNKECVIEPASKLIGRVLKVMQEYGYIGSFEFIDDGRSGKFLVKLVGRINDCGVIKPRHPVKKDEWEYWEQRYLPARDFGLLIVTTPEGVMSHYEAKERGIGGRLLAYVY 130
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_METIG (30S ribosomal protein S8P OS=Methanococcus igneus GN=rps8p PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.935e-29 Identity = 60/124 (48.39%), Postives = 86/124 (69.35%), Query Frame = -1 Query: 255 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 626 L +AL + N E+ GK+ I+P+SK+I + L VMQ HGYIGEFE+++D RAG VEL G++NKCG I PR+ V E E + R LP+R FG ++++TS GIM H EA+ K +GG+++ + Y Sbjct: 7 LANALNHLTNCERVGKKVFYIKPASKLIGRVLKVMQDHGYIGEFEFIEDGRAGIFKVELIGKINKCGAIKPRYAVKKHEFEKFEKRYLPARDFGLLIVSTSQGIMTHYEAKEKGIGGRLISYVY 130
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_THEPD (30S ribosomal protein S8P OS=Thermofilum pendens (strain Hrk 5) GN=rps8p PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.183e-28 Identity = 60/127 (47.24%), Postives = 84/127 (66.14%), Query Frame = -1 Query: 255 VSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 635 + L +AL ++ N E RGK+Q +I PSSK+I+ L +++ GYIG+FE +DD R GKIVV L GR+NK GVI PR+ V E E W LPSR G ++++T G+M H EA+ K +GG +L + Y Sbjct: 3 LDTLANALSTIMNNEVRGKKQCVIYPSSKLIVAVLDTLKRSGYIGDFELIDDGRGGKIVVNLLGRINKIGVIKPRYPVKKNEFEAWEREYLPSRDVGLLIVSTPKGVMTHREAKEKGLGGVLLAYVY 129
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_METTH (30S ribosomal protein S8P OS=Methanobacterium thermoautotrophicum GN=rps8p PE=3 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 1.183e-28 Identity = 63/130 (48.46%), Postives = 86/130 (66.15%), Query Frame = -1 Query: 255 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 644 M + L +AL ++ N E RG + I P+SK+I + L MQK GYIGEFEYVDD RAGK +VEL G +N CGVI PR V E E + R LP++ FG I+++T GIM H+EA+ + +GG++L + Y Sbjct: 1 MTLMDPLANALTNIRNNEIRGNVKCRITPASKLIGRVLRTMQKEGYIGEFEYVDDGRAGKFIVELEGNINHCGVIKPRHAVKKDEFEKFEKRYLPAKNFGIIIVSTPEGIMTHKEAKDRGIGGRLLAYVY 130
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_METAC (30S ribosomal protein S8P OS=Methanosarcina acetivorans GN=rps8p PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.183e-28 Identity = 61/130 (46.92%), Postives = 86/130 (66.15%), Query Frame = -1 Query: 255 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 644 MV + L +AL ++ NAE GK ++RP+SK I L VMQ GYIG+FE++DD +AG V L GR+NKCG I PR+ VG E W + LP++ FG +++TTS+G+M EAR K +GG++L + Y Sbjct: 1 MVLLDPLANALSTIKNAEAIGKSSCVVRPASKNIGNVLKVMQDLGYIGDFEFIDDGKAGIYSVTLVGRINKCGAIKPRYSVGTASFERWEKQFLPAKNFGALIVTTSSGVMSQYEARDKKIGGQLLAYVY 130
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_PYRAR (30S ribosomal protein S8P OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rps8p PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.545e-28 Identity = 60/130 (46.15%), Postives = 88/130 (67.69%), Query Frame = -1 Query: 255 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 644 MV + +L++AL + NAE GKRQV I P +K+ L V+Q++GY+GE EYVDD R GK +V+L G++N G I PR+ V +EI W + LP+RQ G +V++TS G++ H EA+ K +GG +L + Y Sbjct: 1 MVMLDILSNALIQIKNAEVMGKRQVTIWPVNKLTYYTLRVLQRYGYVGEIEYVDDGRGGKYIVQLLGKINDIGPIRPRYPVKYREIVQWEQKFLPARQIGILVISTSQGVVSHIEAKEKKIGGVLLAYVY 130
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_STAMF (30S ribosomal protein S8P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rps8p PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.018e-28 Identity = 63/133 (47.37%), Postives = 89/133 (66.92%), Query Frame = -1 Query: 255 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIE---GWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 644 MV + L +AL ++ NAE R K + +I P+SK+II L VMQ+ GYIGEFEY+DD R GKI V+L GR+NK GVI PRF V ++++E W + LP+ G ++L+T G++ H+EA K GG +L + Y Sbjct: 1 MVMLDTLANALATIQNAEMRAKSEALIWPASKLIINVLRVMQREGYIGEFEYIDDGRWGKIKVQLLGRINKTGVIKPRFPVKLRDLERMPHWLRKYLPAYNIGILILSTPHGVLSHKEAIAKKTGGVLLAYVY 133
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_METJA (30S ribosomal protein S8P OS=Methanocaldococcus jannaschii GN=rps8p PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.442e-28 Identity = 59/124 (47.58%), Postives = 88/124 (70.97%), Query Frame = -1 Query: 255 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 626 L +AL + N E+ GK+ V I+P+SK+I + L VMQ +GYIGEFE+++D RAG VEL G++NKCG I PRF V E + R LP+R FG ++++T+ G+M HEEA+++ +GG++L + Y Sbjct: 7 LANALNHISNCERVGKKVVYIKPASKLIGRVLKVMQDNGYIGEFEFIEDGRAGIFKVELIGKINKCGAIKPRFPVKKFGYEKFEKRYLPARDFGILIVSTTQGVMSHEEAKKRGLGGRLLAYVY 130
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_IGNH4 (30S ribosomal protein S8P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rps8p PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.495e-28 Identity = 61/133 (45.86%), Postives = 87/133 (65.41%), Query Frame = -1 Query: 255 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKE---IEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 644 MV + L +AL ++YN E RG ++ +I P+SK+I L +MQK GY+GEFEY+DD R GKI V L GR+NKCG I PR V ++ + R LPS+ G ++++TS G+M H+EA +K VGG + + Y Sbjct: 1 MVMLDTLANALTTIYNNEVRGNKEAIIMPASKLIANVLRIMQKEGYVGEFEYIDDGRWGKIRVRLLGRINKCGAIKPRVSVSYRDLLVLPEHLRRFLPSKDVGILIISTSQGLMTHKEAIQKRVGGIAIAYVY 133
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_PYRKO (30S ribosomal protein S8P OS=Pyrococcus kodakaraensis GN=rps8p PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.871e-28 Identity = 58/130 (44.62%), Postives = 90/130 (69.23%), Query Frame = -1 Query: 255 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 644 M + L +AL + N+E+ GK++V I+P+SK+I + L VM ++GYIGEFE +DD RAG V+L G++NK G I PRF V ++ E W R LP+ +FG ++++TS G+M H+EA K +GG+++ + Y Sbjct: 1 MTLLDPLANALSHITNSERVGKKEVYIKPASKLIGEVLRVMLENGYIGEFELIDDGRAGIYRVQLIGKINKAGAIKPRFPVKARDYEKWEKRFLPAFEFGILIVSTSQGVMTHKEALEKGIGGRLIAYVY 130 The following BLAST results are available for this feature:
BLAST of CN184783 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184783 ID=CN184783; Name=CN184783; organism=Citrus sinensis; type=EST; length=704bpback to top |