CN184783
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_DESK1 (30S ribosomal protein S8P OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rps8p PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.231e-27 Identity = 60/133 (45.11%), Postives = 89/133 (66.92%), Query Frame = -1 Query: 255 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEI---EGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 644 MV + L +AL ++YNAE R K++V++ P+SK+ + L V+Q+ GYIGEFEY+DD R GKI ++L GR+NK GVI PR+ V +E+ W R LP+ G I+++T G++ H+EA K GG +L + Y Sbjct: 1 MVVMDTLANALSAIYNAEIRAKKEVVVWPASKLTLNVLKVLQREGYIGEFEYIDDGRWGKIKIQLLGRINKIGVIKPRYPVKHRELAEFPEWLKRYLPAYNIGVIIVSTPYGVLSHKEAVEKQTGGVLLAYCY 133
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_PYRAE (30S ribosomal protein S8P OS=Pyrobaculum aerophilum GN=rps8p PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.805e-27 Identity = 55/130 (42.31%), Postives = 88/130 (67.69%), Query Frame = -1 Query: 255 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 644 MV + +L++AL + NAE GK+Q +I P +K+ L V+Q++GY+GE EY+DD + GK +V+L G++N G I PR+ V +EI W + LP+RQ G ++++TS G+M H EA+ + +GG +L + Y Sbjct: 1 MVMLDILSNALIQIKNAEIVGKKQAVIWPVNKLTYYTLRVLQRYGYVGEIEYIDDGKGGKYIVQLLGKINDIGPIRPRYPVKYREIVQWEQKFLPARQIGILIISTSQGVMSHIEAKERKIGGVLLAYVY 130
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_METS3 (30S ribosomal protein S8P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rps8p PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.805e-27 Identity = 59/124 (47.58%), Postives = 82/124 (66.13%), Query Frame = -1 Query: 255 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 626 L DAL ++ N E + K +I P+SK+I + L MQK YIG FEY+DD+RAG+ VEL G +NKCGVI PR V E E + R LP++ FG +++TT GIM H EA+ + +GG++L + Y Sbjct: 7 LADALTNIRNNELQVKDSCVISPASKLIGEVLSTMQKENYIGNFEYIDDNRAGQFKVELEGNINKCGVIKPRHAVKKDEFEKFEKRYLPAKNFGILIVTTPEGIMTHYEAKERGIGGRLLAYMY 130
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_THEAC (30S ribosomal protein S8P OS=Thermoplasma acidophilum GN=rps8p PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.970e-27 Identity = 56/124 (45.16%), Postives = 83/124 (66.94%), Query Frame = -1 Query: 255 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 626 LND + S+ NA + GKR+++ P++K+I K L VMQ + YI FE +D+ R GK + LN +N CGVI PRF V + +E + AR LP+ FG ++LTT+ G+M + EAR+ +GGK+L + Y Sbjct: 6 LNDVINSIKNASRLGKREIIAEPAAKLIGKVLKVMQDYNYIKSFEVIDESRGGKFKIVLNTTINNCGVIKPRFPVKNENLEKYEARYLPAEDFGILILTTTKGVMSNIEARKLGIGGKLLAYVY 129
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_THEVO (30S ribosomal protein S8P OS=Thermoplasma volcanium GN=rps8p PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.107e-26 Identity = 55/129 (42.64%), Postives = 85/129 (65.89%), Query Frame = -1 Query: 255 VRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 641 +R LND + S+ NA + G+R+++ P++K+I K L VMQ + YI FE +D+ R GK + LN +N CGVI PRF V + +E + +R LP+ FG ++LTT+ G+M + EAR+ +GGK+L + Y Sbjct: 1 MRNDTLNDVINSIKNASRLGRREIIAEPAAKLIGKVLKVMQDYNYIKSFEVIDESRGGKFKIVLNTTINNCGVIKPRFPVKNENLEKYESRYLPAEDFGILILTTTKGVMSNIEARKLGIGGKLLAYVY 129
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_ARCFU (30S ribosomal protein S8P OS=Archaeoglobus fulgidus GN=rps8p PE=3 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 1.107e-26 Identity = 55/127 (43.31%), Postives = 88/127 (69.29%), Query Frame = -1 Query: 255 VSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 635 V L++A+ ++ NAE G+++ I+P+SK+I L VM+ +GYI FEYV++HR GK +VEL+G +N CG I PRF V E E + R LP+R FG ++++T+ G+M ++AR++ +GG +L + Y Sbjct: 3 VDTLSNAMIAIKNAEMVGEKKCEIKPASKLIGNVLKVMKDYGYIKGFEYVENHRGGKFIVELSGNINDCGAIRPRFSSSVTEYEMYEKRYLPARDFGILIVSTTKGVMSQKDARKQRLGGVLLAYVY 129
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_HALLT (30S ribosomal protein S8P OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rps8p PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.446e-26 Identity = 54/122 (44.26%), Postives = 76/122 (62.30%), Query Frame = -1 Query: 255 DALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 620 +AL M NAE G + P+S +I L V+ GY+ FEYVDD +AGK VEL G +N+CG + PR+ G E E W R LP+R +G +++TTS G+M H EAR + +GG+V+ + Y Sbjct: 9 NALAGMDNAESVGHLSYTVEPASNIIGSVLEVLYDRGYVDGFEYVDDGKAGKFEVELKGAINECGAVKPRYSAGADEFEKWEKRYLPARDYGTLIVTTSHGVMSHYEAREEGIGGQVIAYVY 130
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_PICTO (30S ribosomal protein S8P OS=Picrophilus torridus GN=rps8p PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.207e-26 Identity = 57/124 (45.97%), Postives = 82/124 (66.13%), Query Frame = -1 Query: 255 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 626 LND + ++ NA + GK +V+I P+S +I + L VMQ + YI FE +++ R GK VEL+ +N CGVI PR V IE + +R LP++ FG I+LTT+ GIM H EAR+ +GGK+L + Y Sbjct: 6 LNDVINTIKNASRIGKSEVIIGPASVMIGRILKVMQDYNYIKSFEVIEEERGGKFRVELSDTINNCGVIKPRLSVKNSNIERYESRYLPAQDFGIIILTTTKGIMSHIEARKLGIGGKLLAYVY 129
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_NITMS (30S ribosomal protein S8P OS=Nitrosopumilus maritimus (strain SCM1) GN=rps8p PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.177e-26 Identity = 54/130 (41.54%), Postives = 82/130 (63.08%), Query Frame = -1 Query: 255 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 644 M ++L + ++YN E R K + I P+SK+ I+ L +QK GYIGEFE++DD R GK ++L ++ KCG ISPRF V E W + LP+ G +++TT+ G+M H EA +K +GG ++G+ Y Sbjct: 1 MPATNILANLFVTLYNNETRRKGECTILPTSKLGIEVLKTLQKDGYIGEFEHIDDKRGGKFKIKLLAKITKCGAISPRFKVKTDEFNNWEQQYLPAYDRGMLLVTTNQGVMSHHEATQKGIGGFLIGYVY 130
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_METHJ (30S ribosomal protein S8P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps8p PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.177e-26 Identity = 50/130 (38.46%), Postives = 88/130 (67.69%), Query Frame = -1 Query: 255 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 644 M R++ + DA+ ++ NA G+ + +++P+ ++I + L +M++ GYI E+ ++D R G+ V ++G +NKCG ISPR+ V + E+E W LPS+ G ++++TS G+M H +ARR VGG++LG+ Y Sbjct: 1 MARLNTVADAMSTLKNASDTGRAECIVQPAGRLIGELLRIMKEAGYIKEYTRIEDGRGGQFKVVMSGLINKCGCISPRYSVSLDEMEYWEQLYLPSKNIGMLMISTSKGVMGHHDARRNGVGGELLGYVY 130 The following BLAST results are available for this feature:
BLAST of CN184783 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184783 ID=CN184783; Name=CN184783; organism=Citrus sinensis; type=EST; length=704bpback to top |