CN184783
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_METM5 (30S ribosomal protein S8P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rps8p PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.353e-24 Identity = 52/124 (41.94%), Postives = 81/124 (65.32%), Query Frame = -1 Query: 255 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 626 L +AL + N E GK ++P+SK+I + L VMQ GYIG FEY++D +AG V+L G++NKCG + PR+ V + E + R LP++ FG ++++T G+M H+EAR VGG+++ + Y Sbjct: 7 LANALNHVSNCESVGKNVAYLKPASKLIGRVLNVMQDQGYIGNFEYIEDGKAGVYKVDLIGQINKCGAVKPRYAVKNHDFEKFEKRYLPAKGFGLLIVSTPKGLMTHDEARNAGVGGRLISYIY 130
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_HALSA (30S ribosomal protein S8P OS=Halobacterium salinarium GN=rps8p PE=3 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.353e-24 Identity = 54/124 (43.55%), Postives = 77/124 (62.10%), Query Frame = -1 Query: 255 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 626 L+DAL + NAE G + P+S ++ L V GYI FE+VD+ +AG+ VEL G +N+CG ++PR+ VG E W R LP+R +G +V+TTS GIM H EAR +GG+V+ + Y Sbjct: 7 LSDALSGIDNAESVGHLTHTVAPASNMVGSVLEVFYDRGYIDGFEFVDNGKAGRFEVELKGAINECGPVNPRYSVGADGFEQWEKRYLPARDYGSLVVTTSHGIMSHYEAREAGIGGQVIAYVY 130
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_HALS3 (30S ribosomal protein S8P OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rps8p PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.353e-24 Identity = 54/124 (43.55%), Postives = 77/124 (62.10%), Query Frame = -1 Query: 255 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 626 L+DAL + NAE G + P+S ++ L V GYI FE+VD+ +AG+ VEL G +N+CG ++PR+ VG E W R LP+R +G +V+TTS GIM H EAR +GG+V+ + Y Sbjct: 7 LSDALSGIDNAESVGHLTHTVAPASNMVGSVLEVFYDRGYIDGFEFVDNGKAGRFEVELKGAINECGPVNPRYSVGADGFEQWEKRYLPARDYGSLVVTTSHGIMSHYEAREAGIGGQVIAYVY 130
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_HALMA (30S ribosomal protein S8P OS=Haloarcula marismortui GN=rps8p PE=1 SV=3) HSP 1 Score: 113.235 bits (282), Expect = 1.353e-24 Identity = 54/122 (44.26%), Postives = 75/122 (61.48%), Query Frame = -1 Query: 255 DALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 620 +AL ++ NAE G + + P+S I L V GYI F +VDD +AG+ VEL G +N+CG + PR+ G E E W R LP+R +G +V+TTS GIM H EAR + VGG+V+ + Y Sbjct: 9 NALSALNNAESVGHLEQTVSPASNEIGSVLEVFYDRGYIDGFSFVDDGKAGEFEVELKGAINECGPVKPRYSAGADEFEKWEKRFLPARDYGTLVVTTSHGIMSHYEAREQGVGGQVIAYVY 130
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_AERPE (30S ribosomal protein S8P OS=Aeropyrum pernix GN=rps8p PE=3 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 3.015e-24 Identity = 57/133 (42.86%), Postives = 83/133 (62.41%), Query Frame = -1 Query: 255 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARL---LPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 644 MV + L +A+ ++ NAE RGK + +I PSSK+I L +++K GYIG FEY+DD R GK V+L GR+N GV+ PR V +E+ L L SR G ++L+T G+M H EA ++ +GG V+ + Y Sbjct: 1 MVMLDTLANAMAAIKNAEMRGKGEAIIMPSSKLIANVLRILEKEGYIGGFEYIDDGRWGKFRVKLLGRINDIGVVKPRTPVSYRELAKMPEHLRKYLASRDVGLLILSTPQGVMTHREALKRKIGGIVIAYVY 133
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_META3 (30S ribosomal protein S8P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps8p PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.143e-24 Identity = 50/124 (40.32%), Postives = 80/124 (64.52%), Query Frame = -1 Query: 255 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 626 L +AL + N E+ GK ++P+SK+I + VMQ GY+G FEY++D +AG VEL G +NKCG + PR+ V E E + R LP++ FG ++++T G+M H+EA+ +GG+++ + Y Sbjct: 7 LANALNHLSNCERVGKDVAYVQPASKLIGRVFKVMQDKGYMGNFEYIEDGKAGIYKVELTGHINKCGAVRPRYAVKKTEFEKFEKRYLPAKGFGLLIVSTPKGLMTHDEAKSNGLGGRLISYIY 130
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_CENSY (30S ribosomal protein S8P OS=Cenarchaeum symbiosum GN=rps8p PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.496e-23 Identity = 52/130 (40.00%), Postives = 79/130 (60.77%), Query Frame = -1 Query: 255 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 644 M ++L + ++YN E R + + P+SK+ ++ L ++K GYIGEFE+V+D R GK V L ++ KCG ISPRF V E W + LPS G +V+TT+ G+M H EA + +GG ++G+ Y Sbjct: 1 MPATNILANLFVTLYNTEARRRGDCQVYPTSKLGVEVLGTLKKAGYIGEFEHVEDSRGGKFSVHLLAKITKCGAISPRFKVKKGEYTFWEQQYLPSYDRGMLVVTTNQGVMSHHEAAERGIGGFLIGYVY 130
BLAST of CN184783 vs. ExPASy Swiss-Prot
Match: RS8_NANEQ (30S ribosomal protein S8P OS=Nanoarchaeum equitans GN=rps8p PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.662e-17 Identity = 41/125 (32.80%), Postives = 72/125 (57.60%), Query Frame = -1 Query: 255 VLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 629 ++ D L + N ++G+ + P S +IIK + +M++ GYI + VD R I +EL+ N+ I PRF V E+E + R LP+ FG ++L+TS G++ + EA+ + +GG ++ + Y Sbjct: 5 IVADFLSHLTNVRRKGEDKTAFFPVSNLIIKLVEIMKREGYIKNYRLVDSSRGKIIEIELSEYFNEANAIKPRFPVEYSELEKYEKRYLPALNFGRLILSTSKGLITNREAKEQKIGGVLIAYVY 129 The following BLAST results are available for this feature:
BLAST of CN184783 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN184783 ID=CN184783; Name=CN184783; organism=Citrus sinensis; type=EST; length=704bpback to top |