CN184780
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184780 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 9.753e-26 Identity = 55/74 (74.32%), Postives = 61/74 (82.43%), Query Frame = -3 Query: 364 PLDFAVFMVHLATIPITGTGH*PSKGVSGAAVIYNKDKAWDDQWLFWVGPFIGAAIAALYHQFILRAGAVKALG 585 P+ FAVFMVHLATIPITGTG P++ GAAVIYNK K WDD W+FWVGPFIGAAIAA YHQF+LRA K+LG Sbjct: 205 PIGFAVFMVHLATIPITGTGINPARSF-GAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQFVLRASGSKSLG 277
BLAST of CN184780 vs. ExPASy Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 9.753e-26 Identity = 55/74 (74.32%), Postives = 61/74 (82.43%), Query Frame = -3 Query: 364 PLDFAVFMVHLATIPITGTGH*PSKGVSGAAVIYNKDKAWDDQWLFWVGPFIGAAIAALYHQFILRAGAVKALG 585 P+ FAVFMVHLATIPITGTG P++ GAAVIYNK K WDD W+FWVGPFIGAAIAA YHQF+LRA K+LG Sbjct: 207 PIGFAVFMVHLATIPITGTGINPARSF-GAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQFVLRASGSKSLG 279
BLAST of CN184780 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.274e-25 Identity = 54/74 (72.97%), Postives = 62/74 (83.78%), Query Frame = -3 Query: 364 PLDFAVFMVHLATIPITGTGH*PSKGVSGAAVIYNKDKAWDDQWLFWVGPFIGAAIAALYHQFILRAGAVKALG 585 P+ FAVFMVHLATIPITGTG P++ + GAAVIYN+ KAWDD W+FW GPFIGA AA YHQ+ILRA A+KALG Sbjct: 202 PIGFAVFMVHLATIPITGTGINPARSI-GAAVIYNQKKAWDDHWIFWAGPFIGALAAAAYHQYILRAAAIKALG 274
BLAST of CN184780 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.274e-25 Identity = 54/71 (76.06%), Postives = 61/71 (85.92%), Query Frame = -3 Query: 373 PLDFAVFMVHLATIPITGTGH*PSKGVSGAAVIYNKDKAWDDQWLFWVGPFIGAAIAALYHQFILRAGAVK 585 P+ FAVFMVHLATIPITGTG P++ + GAAVIYN DKAWDD W+FWVGPFIGAAIAA YHQ++LRA A K Sbjct: 207 PIGFAVFMVHLATIPITGTGINPARSL-GAAVIYNNDKAWDDHWIFWVGPFIGAAIAAAYHQYVLRASAAK 276
BLAST of CN184780 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.274e-25 Identity = 54/71 (76.06%), Postives = 61/71 (85.92%), Query Frame = -3 Query: 373 PLDFAVFMVHLATIPITGTGH*PSKGVSGAAVIYNKDKAWDDQWLFWVGPFIGAAIAALYHQFILRAGAVK 585 P+ FAVFMVHLATIPITGTG P++ + G AVIYNKDKAWDDQW+FWVGP IGAAIAA YHQ++LRA A K Sbjct: 211 PIGFAVFMVHLATIPITGTGINPARSL-GTAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRASAAK 280
BLAST of CN184780 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.840e-25 Identity = 53/73 (72.60%), Postives = 61/73 (83.56%), Query Frame = -3 Query: 367 PLDFAVFMVHLATIPITGTGH*PSKGVSGAAVIYNKDKAWDDQWLFWVGPFIGAAIAALYHQFILRAGAVKAL 585 P+ FAVFMVHLATIPITGTG P++ GAAVIYN +KAWDD W+FWVGPF+GA AA YHQ+ILRA A+KAL Sbjct: 198 PIGFAVFMVHLATIPITGTGINPARSF-GAAVIYNNEKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKAL 269
BLAST of CN184780 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.840e-25 Identity = 52/74 (70.27%), Postives = 61/74 (82.43%), Query Frame = -3 Query: 364 PLDFAVFMVHLATIPITGTGH*PSKGVSGAAVIYNKDKAWDDQWLFWVGPFIGAAIAALYHQFILRAGAVKALG 585 P+ FAVFMVHLATIPITGTG P++ GAAVIYNK + WDD W+FWVGPF+GA AA YHQ++LRA A+KALG Sbjct: 202 PIGFAVFMVHLATIPITGTGINPARSF-GAAVIYNKKRVWDDHWIFWVGPFVGALAAAAYHQYVLRAAAIKALG 274
BLAST of CN184780 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 8.256e-25 Identity = 53/74 (71.62%), Postives = 60/74 (81.08%), Query Frame = -3 Query: 364 PLDFAVFMVHLATIPITGTGH*PSKGVSGAAVIYNKDKAWDDQWLFWVGPFIGAAIAALYHQFILRAGAVKALG 585 P+ FAVFMVHLATIPITGTG P++ GAAVI+NK K WDD W+FWVGPFIGA IAA YHQF+LRA K+LG Sbjct: 205 PIGFAVFMVHLATIPITGTGINPARSF-GAAVIFNKSKPWDDHWIFWVGPFIGATIAAFYHQFVLRASGSKSLG 277
BLAST of CN184780 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.402e-24 Identity = 52/69 (75.36%), Postives = 59/69 (85.51%), Query Frame = -3 Query: 379 PLDFAVFMVHLATIPITGTGH*PSKGVSGAAVIYNKDKAWDDQWLFWVGPFIGAAIAALYHQFILRAGA 585 P+ FAVFMVHLATIPITGTG P++ + GAAV+YN KAW DQW+FWVGPFIGAAIAALYHQ +LRA A Sbjct: 211 PIGFAVFMVHLATIPITGTGINPARSL-GAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRASA 278
BLAST of CN184780 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.137e-24 Identity = 51/69 (73.91%), Postives = 59/69 (85.51%), Query Frame = -3 Query: 379 PLDFAVFMVHLATIPITGTGH*PSKGVSGAAVIYNKDKAWDDQWLFWVGPFIGAAIAALYHQFILRAGA 585 P+ FAVFMVHLATIP+TGTG P++ + GAAV+YN KAW DQW+FWVGPFIGAAIAALYHQ +LRA A Sbjct: 206 PIGFAVFMVHLATIPVTGTGINPARSL-GAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRASA 273 The following BLAST results are available for this feature:
BLAST of CN184780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184780 ID=CN184780; Name=CN184780; organism=Citrus sinensis; type=EST; length=626bpback to top |