CN184780
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184780 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.352e-24 Identity = 52/69 (75.36%), Postives = 59/69 (85.51%), Query Frame = -3 Query: 379 PLDFAVFMVHLATIPITGTGH*PSKGVSGAAVIYNKDKAWDDQWLFWVGPFIGAAIAALYHQFILRAGA 585 P+ FAVFMVHLATIPITGTG P++ + G AV+YN +KAW DQW+FWVGPFIGAAIAALYHQ ILRA A Sbjct: 209 PIGFAVFMVHLATIPITGTGINPARSL-GVAVVYNNNKAWSDQWIFWVGPFIGAAIAALYHQVILRASA 276
BLAST of CN184780 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 9.128e-24 Identity = 49/67 (73.13%), Postives = 59/67 (88.06%), Query Frame = -3 Query: 385 PLDFAVFMVHLATIPITGTGH*PSKGVSGAAVIYNKDKAWDDQWLFWVGPFIGAAIAALYHQFILRA 585 P+ FAVF+VHLATIPITGTG P++ + GAA+IYNKD AWDD W+FWVGPFIGAA+AALYHQ ++RA Sbjct: 215 PIGFAVFLVHLATIPITGTGINPARSL-GAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQIVIRA 280
BLAST of CN184780 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 9.128e-24 Identity = 49/67 (73.13%), Postives = 59/67 (88.06%), Query Frame = -3 Query: 385 PLDFAVFMVHLATIPITGTGH*PSKGVSGAAVIYNKDKAWDDQWLFWVGPFIGAAIAALYHQFILRA 585 P+ FAVF+VHLATIPITGTG P++ + GAA+IYNKD AWDD W+FWVGPFIGAA+AALYHQ ++RA Sbjct: 214 PIGFAVFLVHLATIPITGTGINPARSL-GAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQLVIRA 279
BLAST of CN184780 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.034e-23 Identity = 51/71 (71.83%), Postives = 59/71 (83.10%), Query Frame = -3 Query: 373 PLDFAVFMVHLATIPITGTGH*PSKGVSGAAVIYNKDKAWDDQWLFWVGPFIGAAIAALYHQFILRAGAVK 585 P+ FAVFMVHLATIPITGTG P++ + GAAVIYN+ KAW D W+FWVGP IGAAIAA YHQ++LRA A K Sbjct: 212 PIGFAVFMVHLATIPITGTGINPARSL-GAAVIYNQHKAWHDHWIFWVGPLIGAAIAAAYHQYVLRASAAK 281
BLAST of CN184780 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.034e-23 Identity = 48/67 (71.64%), Postives = 59/67 (88.06%), Query Frame = -3 Query: 385 PLDFAVFMVHLATIPITGTGH*PSKGVSGAAVIYNKDKAWDDQWLFWVGPFIGAAIAALYHQFILRA 585 P+ FAVF+VHLATIPITGTG P++ + GAA+IYNKD +WDD W+FWVGPFIGAA+AALYHQ ++RA Sbjct: 215 PIGFAVFLVHLATIPITGTGINPARSL-GAAIIYNKDHSWDDHWIFWVGPFIGAALAALYHQIVIRA 280
BLAST of CN184780 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 2.247e-23 Identity = 45/67 (67.16%), Postives = 56/67 (83.58%), Query Frame = -3 Query: 385 PLDFAVFMVHLATIPITGTGH*PSKGVSGAAVIYNKDKAWDDQWLFWVGPFIGAAIAALYHQFILRA 585 P+ FAVF+VHLAT+ ITGTG P++ + GAAVIYN+ AW D W+FWVGPFIGAA+AA+YHQ I+RA Sbjct: 215 PIGFAVFLVHLATMGITGTGINPARSL-GAAVIYNQHHAWADHWIFWVGPFIGAALAAIYHQVIIRA 280 HSP 2 Score: 30.4166 bits (67), Expect = 2.247e-23 Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = -1 Query: 585 ARDSHVPVLAPLP 623 ARDSHVP+LAPLP Sbjct: 203 ARDSHVPILAPLP 215
BLAST of CN184780 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 7.728e-23 Identity = 47/67 (70.15%), Postives = 59/67 (88.06%), Query Frame = -3 Query: 385 PLDFAVFMVHLATIPITGTGH*PSKGVSGAAVIYNKDKAWDDQWLFWVGPFIGAAIAALYHQFILRA 585 P+ FAVF+VHLATIPITGTG P++ + GAA+IYNKD AW+D W+FWVGPF+GAA+AA+YHQ I+RA Sbjct: 217 PIGFAVFLVHLATIPITGTGINPARSL-GAAIIYNKDHAWNDHWIFWVGPFVGAALAAIYHQVIIRA 282
BLAST of CN184780 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.318e-22 Identity = 47/67 (70.15%), Postives = 59/67 (88.06%), Query Frame = -3 Query: 385 PLDFAVFMVHLATIPITGTGH*PSKGVSGAAVIYNKDKAWDDQWLFWVGPFIGAAIAALYHQFILRA 585 P+ FAVF+VHLATIPITGTG P++ + GAA+IYN+D AW+D W+FWVGPFIGAA+AA+YHQ I+RA Sbjct: 217 PIGFAVFLVHLATIPITGTGINPARSL-GAAIIYNRDHAWNDHWIFWVGPFIGAALAAIYHQVIIRA 282
BLAST of CN184780 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.722e-22 Identity = 47/67 (70.15%), Postives = 58/67 (86.57%), Query Frame = -3 Query: 385 PLDFAVFMVHLATIPITGTGH*PSKGVSGAAVIYNKDKAWDDQWLFWVGPFIGAAIAALYHQFILRA 585 P+ FAVF+VHLATIPITGTG P++ + GAA+IYN+D AW D W+FWVGPFIGAA+AA+YHQ I+RA Sbjct: 220 PIGFAVFLVHLATIPITGTGINPARSL-GAAIIYNRDHAWSDHWIFWVGPFIGAALAAIYHQVIIRA 285
BLAST of CN184780 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.722e-22 Identity = 47/67 (70.15%), Postives = 58/67 (86.57%), Query Frame = -3 Query: 385 PLDFAVFMVHLATIPITGTGH*PSKGVSGAAVIYNKDKAWDDQWLFWVGPFIGAAIAALYHQFILRA 585 P+ FAVF+VHLATIPITGTG P++ + GAA+I+NKD AWDD W+FWVGPFIGAA+AALYH ++RA Sbjct: 214 PIGFAVFLVHLATIPITGTGINPARSL-GAAIIFNKDNAWDDHWVFWVGPFIGAALAALYHVIVIRA 279 The following BLAST results are available for this feature:
BLAST of CN184780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184780 ID=CN184780; Name=CN184780; organism=Citrus sinensis; type=EST; length=626bpback to top |