CN184773

Overview
NameCN184773
Unique NameCN184773
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length667
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184773 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.352e-60
Identity = 119/182 (65.38%), Postives = 138/182 (75.82%), Query Frame = 2
Query:  143 TAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTK-------CSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS 667
            T  ++  GKDY++PPP   FE  ELK WSFYRA IAEFIAT LFLY++VLTV+G  KS T        C++VG+ GI+WAFGGMIF+LVYCTAGISGGHINPAVT GLFLA K+SL RA+ YMV QCLGA CG G+VK F     Y R  GGAN+++ GY  G G+GAEIIGTFVLVYTVFS
Sbjct:    7 TEEESLSGKDYLDPPPVKTFEVRELKKWSFYRAVIAEFIATLLFLYVTVLTVIGF-KSQTDINAGGGACASVGLLGISWAFGGMIFILVYCTAGISGGHINPAVTFGLFLASKVSLVRAVSYMVAQCLGATCGVGLVKVFQST-YYNRYGGGANMLSDGYNVGVGVGAEIIGTFVLVYTVFS 186          
BLAST of CN184773 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.352e-60
Identity = 116/173 (67.05%), Postives = 130/173 (75.14%), Query Frame = 2
Query:  167 KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMG------VVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS 667
            +DY +PPPAP F+  EL+ W  YRA IAEF+AT LFLY+S+LTV+G             C  VGI GIAWAFGGMIFVLVYCTAGISGGHINPAVT+GLFLARK+SL R + Y+V QCLGAICG G VK F  +  Y R  GGAN +A GY KG GLGAEIIGTFVLVYTVFS
Sbjct:   16 RDYKDPPPAPFFDMEELRKWPLYRAVIAEFVATLLFLYVSILTVIGYKAQTDATAGGVDCGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTVGLFLARKVSLVRTVLYIVAQCLGAICGCGFVKAFQ-SSYYTRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFS 187          
BLAST of CN184773 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 8.938e-60
Identity = 117/173 (67.63%), Postives = 132/173 (76.30%), Query Frame = 2
Query:  167 KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGV-VKSNTK-----CSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS 667
            +DY +PPP P F+  EL  WS YRA IAEF+AT LFLY++VLTV+G  ++S+TK     C  VGI GIAWAFGGMIF+LVYCTAGISGGHINPAVT GLFLARK+SL RA+ YMV QCLGAICG G VK F  +  Y    GGAN +A GY  G GL AEIIGTFVLVYTVFS
Sbjct:   14 RDYEDPPPTPFFDAEELTKWSLYRAVIAEFVATLLFLYVTVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQ-SSHYVNYGGGANFLADGYNTGTGLAAEIIGTFVLVYTVFS 185          
BLAST of CN184773 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.525e-59
Identity = 115/175 (65.71%), Postives = 133/175 (76.00%), Query Frame = 2
Query:  167 KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMG--------VVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS 667
            +DY++PPPAPL +  EL  WS YRA IAEF+AT LFLY++V TV+G        V  ++  C  VG+ GIAWAFGGMIF+LVYCTAG+SGGHINPAVTLGLFLARK+SL RAL YM  QCLGAICG  +VKGF  +  Y R  GGAN +A GY+ G GL AEIIGTFVLVYTVFS
Sbjct:   16 RDYIDPPPAPLVDVDELGKWSLYRALIAEFVATLLFLYVTVATVIGYKHQTDAAVNGADAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTLGLFLARKVSLVRALLYMAAQCLGAICGVALVKGFQ-SSLYDRYGGGANELAAGYSTGTGLAAEIIGTFVLVYTVFS 189          
BLAST of CN184773 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 2.600e-59
Identity = 121/189 (64.02%), Postives = 138/189 (73.02%), Query Frame = 2
Query:  137 IGTAAQTQDG----KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--------SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS 667
            I  AA  + G    KDY +PPPAPL +  EL  WS YRA IAEF+AT LFLYI+V TV+G           ++  CS VGI GIAWAFGGMIF+LVYCTAG+SGGHINPAVT GLFLARK+SL RA+ Y+V Q LGAICG G+VKGF  A  Y R  GGAN ++ GY+KG GL AEIIGTFVLVYTVFS
Sbjct:    5 IEAAAAAEGGEYMAKDYSDPPPAPLIDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQSDPGANAADAACSGVGILGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRAVLYIVAQSLGAICGVGLVKGFQSA-FYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFS 192          
BLAST of CN184773 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 9.882e-59
Identity = 117/175 (66.86%), Postives = 130/175 (74.29%), Query Frame = 2
Query:  167 KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKS--------NTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS 667
            +DY +PPPAPL +  EL  WS YRA IAEF+AT LFLYI+V TV+G            +  CS VGI GIAWAFGGMIF+LVYCTAGISGGHINPAVT GLFLARK+SL RAL YM  Q LGAICG  +VKGF  +G Y R  GGAN V+ GY+ G GL AEIIGTFVLVYTVFS
Sbjct:   18 RDYADPPPAPLIDIDELGKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDASASGPDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMAAQSLGAICGVALVKGFQ-SGFYARYGGGANEVSAGYSTGTGLAAEIIGTFVLVYTVFS 191          
BLAST of CN184773 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 9.882e-59
Identity = 115/175 (65.71%), Postives = 135/175 (77.14%), Query Frame = 2
Query:  164 GKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNT-------KCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS 667
            GKDY +PPP PLF+  EL  WSFYRA IAEFIAT LFLY++++TV+G  KS T       +C+ VG+ GIAWAFGGMIF+LVYCTAGISGGHINPAVT GL LARK++L RA+ YMV QCLGAICG  +VK F  A  + R  GGAN ++ GY+ G G+ AEIIGTFVLVYTVFS
Sbjct:   14 GKDYQDPPPEPLFDATELGKWSFYRALIAEFIATLLFLYVTIMTVIGY-KSQTDPALNPDQCTGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVTLVRAVMYMVAQCLGAICGVALVKAFQSA-YFTRYGGGANGLSDGYSIGTGVAAEIIGTFVLVYTVFS 186          
BLAST of CN184773 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.686e-58
Identity = 116/187 (62.03%), Postives = 136/187 (72.73%), Query Frame = 2
Query:  137 IGTAAQTQDG--KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKS--------NTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS 667
            +G  A  + G  +DY +PPPAPL +  EL  WS YRA IAEF+AT LFLY++V TV+G            +  C  VG+ GIAWAFGGMIF+LVYCTAGISGGHINPAVT GLFLARK+SL RA+ Y+V QCLGA+CG  +VKGF  +  Y R  GGAN +A GY+KG GL AEIIGTFVLVYTVFS
Sbjct:    1 MGKEADVEAGGVRDYEDPPPAPLVDIDELGRWSLYRAVIAEFVATLLFLYVTVATVIGYKHQTDASASGDDAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAVCGVALVKGFQ-SSFYDRYGGGANELAAGYSKGTGLAAEIIGTFVLVYTVFS 186          
BLAST of CN184773 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.250e-53
Identity = 102/167 (61.08%), Postives = 125/167 (74.85%), Query Frame = 2
Query:  167 KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS 667
            KDY +PPPAPL + GEL  WS YRA IAEF AT L + ISV TV+G  + + +    G+ GIAWAFGG+IFVLVYCTAGISGGH+NPAVT  + LAR++SL RA  Y + QC+GA+CGAG+ +   G GQY R  GGAN +A GY+ G G+ AE++GTFVLVYTVFS
Sbjct:   12 KDYQDPPPAPLVDTGELGKWSLYRAAIAEFTATLLLVCISVSTVIGEKRQSGE-GGAGVLGIAWAFGGLIFVLVYCTAGISGGHMNPAVTFAMVLARRVSLPRAALYTMAQCVGAVCGAGLARAMHGGGQYARHGGGANELAAGYSAGAGVVAEMVGTFVLVYTVFS 177          
BLAST of CN184773 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2)

HSP 1 Score: 208.764 bits (530), Expect = 2.132e-53
Identity = 103/168 (61.31%), Postives = 121/168 (72.02%), Query Frame = 2
Query:  173 YVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTK---CSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS 667
            Y +PPPAPL +  EL  WS YRA IAEF+AT +FLY+S+ TV+G          C+ VG  G+AW+FG  IFVLVYCT G+SGGHINPAVTLGLF  RKLSL R + Y+V QCLGAI GAG+VKG M    Y  L GGAN V+ GY+    LGAEI+GTF+LVYTVFS
Sbjct:   23 YWDPPPAPLLDTSELGKWSLYRALIAEFMATLIFLYVSIATVIGYKNQRATVDACTGVGYLGVAWSFGATIFVLVYCTGGVSGGHINPAVTLGLFFGRKLSLVRTVLYVVAQCLGAIAGAGIVKGIM-KRPYDALGGGANTVSDGYSAAGALGAEIVGTFILVYTVFS 189          
The following BLAST results are available for this feature:
BLAST of CN184773 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 123
Match NameE-valueIdentityDescription
PIP26_ARATH2.352e-6065.38Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ... [more]
PIP24_ARATH2.352e-6067.05Probable aquaporin PIP2-4 OS=Arabidopsis thaliana ... [more]
PIP23_ARATH8.938e-6067.63Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3... [more]
PIP24_ORYSJ1.525e-5965.71Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica G... [more]
PIP23_ORYSJ2.600e-5964.02Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]
PIP26_MAIZE9.882e-5966.86Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1[more]
PIP25_ARATH9.882e-5965.71Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
PIP25_ORYSJ1.686e-5862.03Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica G... [more]
PIP28_ORYSJ1.250e-5361.08Probable aquaporin PIP2-8 OS=Oryza sativa subsp. j... [more]
PIP27_ORYSJ2.132e-5361.31Probable aquaporin PIP2-7 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006B06_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184773 ID=CN184773; Name=CN184773; organism=Citrus sinensis; type=EST; length=667bp
GAGGCATCAAACGGCCACAAACAAAAAAGCAAGTGCTTCTTATTGACTAT
TTTGTGTTTTTGAGGGAGTAGCAGAAATGGAAGGCAAAGAAGAGGATGTT
AGACTGGGAGCCAACAAGTTCGCCGAGAGGCAGCCGATTGGGACGGCGGC
TCAGACCCAAGATGGCAAGGACTACGTTGAACCCCCACCGGCGCCGCTCT
TCGAGCCCGGCGAGCTCAAGTCTTGGTCGTTTTACAGGGCCGGTATAGCC
GAGTTCATAGCCACTTTTCTTTTCTTGTACATCTCCGTACTGACAGTGAT
GGGCGTCGTCAAGTCCAACACCAAGTGCTCAACCGTCGGCATTCAAGGGA
TTGCATGGGCCTTCGGTGGCATGATCTTCGTGCTCGTTTACTGCACAGCT
GGCATCTCGGGTGGTCATATCAACCCGGCGGTGACACTCGGCCTGTTCTT
GGCGAGGAAGCTGTCGCTGACACGTGCACTTTTCTACATGGTGATGCAGT
GTCTGGGAGCCATCTGCGGTGCTGGCGTTGTTAAGGGTTTCATGGGTGCC
GGCCAATACGGGCGGCTCGCCGGCGGTGCCAACGTCGTAGCTCATGGCTA
CACCAAGGGTGATGGTCTTGGTGCCGAGATTATTGGTACTTTTGTTCTTG
TCTACACAGTTTTCTCT
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