CN184773
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184773 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.157e-13 Identity = 56/160 (35.00%), Postives = 79/160 (49.38%), Query Frame = 2 Query: 206 PGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTV--GIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDG-LGA---EIIGTFVLVYTVFS 667 P E +A +AEFI+T +F+ + M K +T G+ A A +FV V A ISGGH+NPAVT G F+ ++L R + Y + Q LG++ ++K GG V A G + G G L A EI+ TF LVYTV++ Sbjct: 11 PDEATRPDALKAALAEFISTLIFVVAGSGSGMAFNKLTENGATTPSGLVAAAVAHAFGLFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLILK---------FATGGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYA 161
BLAST of CN184773 vs. ExPASy Swiss-Prot
Match: BIB_DROME (Neurogenic protein big brain OS=Drosophila melanogaster GN=bib PE=1 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 2.817e-13 Identity = 51/151 (33.77%), Postives = 75/151 (49.67%), Query Frame = 2 Query: 212 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF 664 E+++ F+R+ I+E +A+F++++I GV + S + A A G + L C ISG HINPAVTL L + R +S RA Y+ QC G I GA ++ G G G L + A + G E I TF++V F Sbjct: 58 EIRTLEFWRSIISECLASFMYVFIVCGAAAGVGVGASVSSV--LLATALASGLAMATLTQCFLHISGAHINPAVTLALCVVRSISPIRAAMYITAQCGGGIAGAALLYGVTVPGYQGNLQAAISHSA-ALAAWERFGVEFILTFLVVLCYF 205
BLAST of CN184773 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 3.679e-13 Identity = 50/150 (33.33%), Postives = 75/150 (50.00%), Query Frame = 2 Query: 236 RAGIAEFIATFLFLYISVLT--VMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDG----LGAEIIGTFVLVYTVFS 667 RA +AEFI+T +F++ + + N + G+ A A +FV V A ISGGH+NPAVT G+ L ++L R + Y + Q LG++ ++ GG + A G + G G L EI+ TF LVYTV++ Sbjct: 22 RAALAEFISTLIFVFAGSGSGIAFNKITDNGATTPSGLVAAALAHAFGLFVAVSVGANISGGHVNPAVTFGVLLGGNITLLRGILYWIAQLLGSVAACFLL---------SFATGGEPIPAFGLSAGVGSLNALVFEIVMTFGLVYTVYA 162
BLAST of CN184773 vs. ExPASy Swiss-Prot
Match: MIP_RAT (Lens fiber major intrinsic protein (Fragment) OS=Rattus norvegicus GN=Mip PE=1 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 3.679e-13 Identity = 50/152 (32.89%), Postives = 73/152 (48.03%), Query Frame = 2 Query: 212 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS 667 EL+S SF+RA AEF AT +++ + + + + + +A AFG + LV ISG H+NPAVT + ++SL RA Y+ Q LGA+ GA V+ G LA N + G + G EI T V +F+ Sbjct: 1 ELRSASFWRAIFAEFFATLFYVFFGLGSSLRWAPG-----PLHVLQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRGNLA--LNTLHAGVSVGQATTVEIFLTLQFVLCIFA 145
BLAST of CN184773 vs. ExPASy Swiss-Prot
Match: TIP11_MAIZE (Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.806e-13 Identity = 54/159 (33.96%), Postives = 79/159 (49.69%), Query Frame = 2 Query: 197 LFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS 667 ++ PG LK A AEFI+T +F++ + M K + G+ A A +FV V A ISGGH+NPAVT G F+ ++L R L Y V Q LG+ +++ G G+ G + G + + L EI+ TF LVYTV++ Sbjct: 14 VYHPGALK------AAFAEFISTLIFVFAGQGSGMAFSKLTGGGPTTPAGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWVAQLLGSTVACFLLRFSTG----GQATGTFGLT--GVSVWEALVLEIVMTFGLVYTVYA 160
BLAST of CN184773 vs. ExPASy Swiss-Prot
Match: MIP_MOUSE (Lens fiber major intrinsic protein OS=Mus musculus GN=Mip PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 4.806e-13 Identity = 50/152 (32.89%), Postives = 72/152 (47.37%), Query Frame = 2 Query: 212 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS 667 EL+S SF+RA AEF AT +++ + + + + +A AFG + LV ISG H+NPAVT + ++SL RA Y+ Q LGA+ GA V+ G LA N + G + G EI T V +F+ Sbjct: 3 ELRSASFWRAIFAEFFATLFYVFFGLGASLRWAPG-----PLHVLQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRGNLA--LNTLHAGVSVGQATTVEIFLTLQFVLCIFA 147
BLAST of CN184773 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.806e-13 Identity = 50/152 (32.89%), Postives = 72/152 (47.37%), Query Frame = 2 Query: 212 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS 667 EL+S SF+RA AEF AT +++ + + + + + +A AFG + LV ISG H+NPAVT + ++SL RA YM Q LGA+ GA V+ G LA N + + G EI T V +F+ Sbjct: 3 ELRSASFWRAIFAEFFATLFYVFFGLGSSLRWAPG-----PLHVLQVAMAFGLALATLVQSVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLA--LNTLHPAVSVGQATTVEIFLTLQFVLCIFA 147
BLAST of CN184773 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.276e-13 Identity = 51/155 (32.90%), Postives = 83/155 (53.55%), Query Frame = 2 Query: 236 RAGIAEFIATFLFLYISVLTVMGVVK------SNTKCSTVG-IQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVK----GFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS 667 RA +AEF++TF+F++ +++ + K ++T +T G + +A A +F V +SGGH+NPAVT + ++S+ RA++Y V Q +GAI +++ G G + VA G ++ GL EII TF LVY V+S Sbjct: 24 RATLAEFLSTFVFVFAGEGSILALDKLYWDTAAHTGTNTPGGLVLVALAHALALFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAILACLLLRLATNGLRPVGFH---------VASGVSELHGLLMEIILTFALVYVVYS 169
BLAST of CN184773 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.071e-12 Identity = 52/151 (34.44%), Postives = 83/151 (54.97%), Query Frame = 2 Query: 236 RAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAI-CGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLG----AEIIGTFVLVYTVFS 667 +AG+AEFI+TF+F++ + + K ++ + G+ + A +FV V A ISGGH+NPAV G F+ ++L R + Y++ Q LG+I C A +V ++V A G ++G G+G EI+ TF LVYTV++ Sbjct: 21 KAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAV-FGAFVGGNITLLRGIVYIIAQLLGSIVCSALLV-----------FVTASSVPAFGLSEGVGVGPALVLEIVMTFGLVYTVYA 159
BLAST of CN184773 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.826e-12 Identity = 53/157 (33.76%), Postives = 84/157 (53.50%), Query Frame = 2 Query: 236 RAGIAEFIATFLFLYISVLTVMGVVK------SNTKCSTVG---IQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVK----GFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS 667 RA +AEF++TF+F++ + +++ + K ++ +T G + +A AF +F V +SGGH+NPAVT G + +++ RA++Y + Q LGAI +++ G G RLA G V +GL EII TF LVY V+S Sbjct: 24 RATLAEFLSTFVFVFAAEGSILSLDKLYWEHAAHAGTNTPGGLILVALAHAFA--LFAAVSAAINVSGGHVNPAVTFGALVGGRVTAIRAIYYWIAQLLGAILACLLLRLTTNGMRPVG--FRLASGVGAV-------NGLVLEIILTFGLVYVVYS 169 The following BLAST results are available for this feature:
BLAST of CN184773 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 123
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184773 ID=CN184773; Name=CN184773; organism=Citrus sinensis; type=EST; length=667bpback to top |