CN184771

Overview
NameCN184771
Unique NameCN184771
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CADH9_ARATH (Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana GN=CAD9 PE=1 SV=2)

HSP 1 Score: 219.164 bits (557), Expect = 1.888e-56
Identity = 109/157 (69.43%), Postives = 131/157 (83.44%), Query Frame = -2
Query:  221 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTM 691
            K  KA G+KVTVIS+S +K  EAI  LGADSFLV+ D  +M+AA+GTMD IIDT+SAVH L PL+GLLK  GKL+ +G PEKPLELP F L++GRK+VGGS +GGMKETQEM+DF AKHNI ADIE+I  D +NTA+ERLAK+DVRYRFVIDVAN++
Sbjct:  201 KIGKAFGLKVTVISSSSTKAEEAINHLGADSFLVTTDPQKMKAAIGTMDYIIDTISAVHALYPLLGLLKVNGKLIALGLPEKPLELPMFPLVLGRKMVGGSDVGGMKETQEMLDFCAKHNITADIELIKMDEINTAMERLAKSDVRYRFVIDVANSL 357          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: MTDH1_STYHU (Probable mannitol dehydrogenase 1 OS=Stylosanthes humilis GN=CAD1 PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 9.371e-56
Identity = 107/160 (66.88%), Postives = 134/160 (83.75%), Query Frame = -2
Query:  212 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKST 691
            KF KA G+KVTVIS+SP+K+SEAI+ LGADSFL+S D ++M+AA GTMD IIDT+SAVH L+ L+GLLK  GKLV VG P KPL+LP F L+ GRK++GGS  GG+KETQEM+DF  KHNI A+IE+I  D +NTA+ERL+KADV+YRFVIDVAN++ S+
Sbjct:  193 KFGKAFGLKVTVISSSPNKESEAIDVLGADSFLLSSDPEKMKAATGTMDYIIDTISAVHSLVSLLGLLKLNGKLVTVGLPSKPLQLPIFPLVAGRKLIGGSNFGGLKETQEMLDFCGKHNIAANIELIKMDEINTAIERLSKADVKYRFVIDVANSLSSS 352          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CADH5_ORYSJ (Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza sativa subsp. japonica GN=CAD5 PE=3 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 6.074e-55
Identity = 107/158 (67.72%), Postives = 131/158 (82.91%), Query Frame = -2
Query:  218 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMK 691
            KFAKA G+ VTVIS+SP K+ EA+ERLGAD+F+VS++ DEM AA GTMDGII+TVSA  P+ PL+GLLK  GK++LVG PEKP+E+P F+L+   K + GS IGGM +T EMID AAKH + A+IEVI ADYVNTA+ERLAKADVRYRFVID+ NT+K
Sbjct:  194 KFAKAFGMTVTVISSSPGKRQEALERLGADAFVVSKNADEMNAATGTMDGIINTVSANIPIAPLLGLLKPNGKMILVGLPEKPMEIPPFALVASNKTLAGSCIGGMADT-EMIDLAAKHGVTAEIEVIGADYVNTAMERLAKADVRYRFVIDIGNTLK 350          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CADH3_ORYSJ (Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza sativa subsp. japonica GN=CAD3 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 3.333e-53
Identity = 104/157 (66.24%), Postives = 127/157 (80.89%), Query Frame = -2
Query:  221 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTM 691
            KFA+A G+KVTVIS+SP KK EA+ERLGAD+F+VS   +EM+AA  TMDG+I+TVSA  P+ P + LLK  GK++LVG PE PLE+P FSL+ G + + GS IGGM +TQEMI+ AAKH + ADIEVI AD VNTA+ERLAKADVRYRFVIDV NT+
Sbjct:  204 KFARAFGLKVTVISSSPGKKREALERLGADAFVVSSSAEEMEAARSTMDGVINTVSANTPMAPYLALLKPNGKMILVGLPENPLEVPPFSLVHGNRTLAGSNIGGMADTQEMIELAAKHGVTADIEVIGADDVNTAMERLAKADVRYRFVIDVGNTL 360          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CADH2_ARATH (Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis thaliana GN=CAD2 PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.654e-52
Identity = 103/157 (65.61%), Postives = 128/157 (81.53%), Query Frame = -2
Query:  221 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTM 691
            K  KA G++VTVIS S  K+ EAI+RLGADSFLV+ D  +M+ A+GTMD IIDTVSA H L+PL  LLK  GKLV +G PEKPL+LP FSL++GRK+VGGS IGGMKETQEM++F AKH I +DIE+I    +N+A++RLAK+DVRYRFVIDVAN++
Sbjct:  197 KIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFIIDTVSAEHALLPLFSLLKVNGKLVALGLPEKPLDLPIFSLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDIELIKMSDINSAMDRLAKSDVRYRFVIDVANSL 353          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CADH7_ORYSJ (Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa subsp. japonica GN=CAD7 PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.388e-51
Identity = 99/159 (62.26%), Postives = 128/159 (80.50%), Query Frame = -2
Query:  215 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKS 691
            KFA+A G++VTVISTSP K+ EA+ERLGAD F+VS +  EM+AAMGTM GII+T SA   +   + LLK +GK++LVG PEKPL++P F+L+ G KI+ GS +G + ETQEMIDFAA+H + ADIE+I AD VNTA+ERLAK DVRYRFV+D+ NT++S
Sbjct:  220 KFARAFGMRVTVISTSPVKRQEALERLGADGFIVSTNASEMKAAMGTMHGIINTASASTSMHSYLALLKPKGKMILVGLPEKPLQIPTFALVGGGKILAGSCMGSISETQEMIDFAAEHGVAADIELIGADEVNTAMERLAKGDVRYRFVVDIGNTLRS 378          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CADH9_ORYSJ (Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza sativa subsp. japonica GN=CAD9 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 5.321e-51
Identity = 102/157 (64.97%), Postives = 127/157 (80.89%), Query Frame = -2
Query:  221 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTM 691
            KF KA GVKVTVISTSP K++EA+ERLGAD+FL+S + ++M+AA GTMDGIIDTVSAVH L PLI LL++ G+LV VG+P KP++L  + L    K V GSMIGGM++TQEM+DFA +H + A++EVI  + VN A+ERL K DVRYRFVIDVANTM
Sbjct:  202 KFGKAFGVKVTVISTSPWKEAEAVERLGADAFLLSTNAEQMKAAAGTMDGIIDTVSAVHDLTPLITLLRTHGQLVPVGSPGKPVQLALYPLQSDGKSVAGSMIGGMRDTQEMVDFAVEHGVAAEVEVIGMEDVNGAMERLQKGDVRYRFVIDVANTM 358          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CADH3_ARATH (Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis thaliana GN=CAD3 PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.641e-50
Identity = 100/157 (63.69%), Postives = 125/157 (79.62%), Query Frame = -2
Query:  221 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTM 691
            K  KA G++VTVIS S  K+ EAI+RLGADSFLV+ D  +M+ A+GTMD IIDTVSA H L+PL  LLK  GKLV +G  EKPL+LP F L++GRK+VGGS IGGMKETQEM++F AKH I +DIE+I    +N+A++RL K+DVRYRFVIDVAN++
Sbjct:  196 KIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLLEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDIELIKMSDINSAMDRLVKSDVRYRFVIDVANSL 352          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CAD8B_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8B OS=Oryza sativa subsp. japonica GN=CAD8B PE=3 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 1.311e-49
Identity = 95/156 (60.90%), Postives = 123/156 (78.85%), Query Frame = -2
Query:  224 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT 691
            KFAKA G++VTVISTSP K+ EA+E LGAD FLVSRD  +M AA GTMDGI++TVSA HP+ PL  L+K   ++V VGAP +PLELPA++++ G K + G+ +GG+++ Q M+DFA +H I A++EVI  DYVNTA+ERL K DVRYRFVIDVA +
Sbjct:  271 KFAKAFGMRVTVISTSPGKRREALEHLGADEFLVSRDAGQMAAAAGTMDGILNTVSAWHPVAPLFALMKPMAQMVFVGAPTRPLELPAYAIVPGGKGITGNCVGGIRDCQAMLDFAGEHGITAEVEVIKMDYVNTAMERLEKNDVRYRFVIDVAGS 426          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CAD8C_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8C OS=Oryza sativa subsp. japonica GN=CAD8C PE=2 SV=2)

HSP 1 Score: 193.356 bits (490), Expect = 1.109e-48
Identity = 93/156 (59.62%), Postives = 121/156 (77.56%), Query Frame = -2
Query:  224 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT 691
            KFAKA G++VTVISTSP K+ EA+E LGAD FLVSRD  +M AA  TMDGI++TVSA HP+ PL  L+K   ++V VG P +PLELPA++++ G K + G+ +GG+++ Q M+DFA +H I A++EVI  DYVNTA+ERL K DVRYRFVIDVA +
Sbjct:  274 KFAKAFGMRVTVISTSPGKRQEALEHLGADEFLVSRDAGQMAAAAATMDGILNTVSAWHPIAPLFSLMKPMAQMVFVGGPTRPLELPAYAIVPGGKGITGNCVGGIRDCQAMLDFAGEHGITAEVEVIKMDYVNTAMERLEKNDVRYRFVIDVAGS 429          
The following BLAST results are available for this feature:
BLAST of CN184771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
CADH9_ARATH1.888e-5669.43Probable cinnamyl alcohol dehydrogenase 9 OS=Arabi... [more]
MTDH1_STYHU9.371e-5666.88Probable mannitol dehydrogenase 1 OS=Stylosanthes ... [more]
CADH5_ORYSJ6.074e-5567.72Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza... [more]
CADH3_ORYSJ3.333e-5366.24Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza... [more]
CADH2_ARATH1.654e-5265.61Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis th... [more]
CADH7_ORYSJ2.388e-5162.26Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa s... [more]
CADH9_ORYSJ5.321e-5164.97Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza... [more]
CADH3_ARATH2.641e-5063.69Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis th... [more]
CAD8B_ORYSJ1.311e-4960.90Probable cinnamyl alcohol dehydrogenase 8B OS=Oryz... [more]
CAD8C_ORYSJ1.109e-4859.62Probable cinnamyl alcohol dehydrogenase 8C OS=Oryz... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006B04_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184771 ID=CN184771; Name=CN184771; organism=Citrus sinensis; type=EST; length=737bp
GAGGGTAAAAACTAACATATAGCTCGCTATTACATAAATTTGTCACACAG
ATGGAATATACGTCACCAAATTATTATTCTTAAAAAGCAAAAACAGATTT
GAAATCACAACAAAAGACTAACATAATCTAAAACTTAGACGATGTTGTGA
CTCGACAATAAACGCACATTCCTCATTTTAAGCGCAACTCAAAAGGAAGA
AAATTTTAAGGGGTGGACTTCATTGTGTTTGCAACGTCGATGACAAAGCG
ATATCTAACATCGGCTTTAGCAAGGCGCTCCAGGGCTGTGTTCACATAGT
CGGCCGGTATGACCTCAATATCAGCTCTGATGTTGTGTTTTGCCGCAAAA
TCAATCATCTCTTGAGTCTCCTTCATCCCCCCAATCATGCTGCCACCAAC
TATCTTCCTCCCCATGAGCAGGGAGAAAGCTGGTAGCTCCAGTGGCTTCT
CTGGTGCACCAACAAGTACAAGCTTTCCTTGAGATTTCAACAGTCCAATC
AACGGCATTAGAGGGTGAACTGCAGATACTGTATCGATAATACCATCCAT
TGTGCCCATGGCAGCCTGCATCTCATCTTGATCACGACTGACCAAAAAGG
AATCAGCGCCAAGACGTTCAATGGCTTCACTCTTCTTGCTAGGGGAGGTA
CTGATCACAGTCACCTTGACCCCCATAGCCTTTGCGAATTTGACGGCGAC
ATGGCCTAGACCGCCCAAGCCGACAACACCCACATGC
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