CN184771

Overview
NameCN184771
Unique NameCN184771
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CAD8D_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8D OS=Oryza sativa subsp. japonica GN=CAD8D PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.506e-48
Identity = 95/157 (60.51%), Postives = 122/157 (77.71%), Query Frame = -2
Query:  221 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTM 691
            KF KA G+KVTVIS+SP+K+ EA+ RLGAD+FL SRD + M AA  TMDGIIDTVSA HPL+PL+ LLK +G++V+VGAP  PL+LPA++++ G K V G+ +G + E Q M+DFA +H I AD+EV+  D VN AL RL + DVRYRFV+DVA TM
Sbjct:  196 KFGKAFGMKVTVISSSPAKRGEALGRLGADAFLSSRDGEGMAAAAATMDGIIDTVSAGHPLVPLLSLLKPKGQMVVVGAPAMPLQLPAYAIIEGGKRVAGNGVGSVAECQAMLDFAGEHGIAADVEVVAMDAVNAALGRLERNDVRYRFVVDVAGTM 352          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CADH6_ORYSJ (Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza sativa subsp. japonica GN=CAD6 PE=2 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 1.227e-47
Identity = 96/158 (60.76%), Postives = 119/158 (75.32%), Query Frame = -2
Query:  218 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMK 691
            KF KA G+ VTVISTSP+K+ EA E L AD+F+VS DQ +MQA   ++D IIDTV+A H L P++ LLK  GKLVLVGAPEKP+ELP+F L+ G++ V GSM GGMKETQEM+D   +HNI  DIE++  D +N AL RLA+ DVRYRFVI+V    K
Sbjct:  202 KFGKAFGLHVTVISTSPAKEREARENLKADNFVVSTDQKQMQAMTRSLDYIIDTVAATHSLGPILELLKVNGKLVLVGAPEKPVELPSFPLIFGKRTVSGSMTGGMKETQEMMDICGEHNITCDIEIVSTDRINDALARLARNDVRYRFVINVGGDSK 359          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CAD8A_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8A OS=Oryza sativa subsp. japonica GN=CAD8A PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.038e-46
Identity = 96/157 (61.15%), Postives = 120/157 (76.43%), Query Frame = -2
Query:  221 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTM 691
            KF KA G+KVTVIS+SP+K+ EA+ERLGAD+FL SRD + M AA  TMDGIIDTVSA HPL+PL+ LLK +G++V+VGAP  PL+LPA +++ G K V GS  G + E Q M+DFA +H I AD+EV+    VN AL RL + DVRYRFVIDVA T+
Sbjct:  196 KFGKAFGMKVTVISSSPAKREEALERLGADAFLSSRDGEGMAAAAATMDGIIDTVSAGHPLVPLLSLLKPKGQMVVVGAPAAPLQLPAIAIIDGGKRVAGSGGGSVAECQAMLDFAGEHGIAADVEVVAMGDVNAALGRLERNDVRYRFVIDVAGTL 352          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CADH1_ARACO (Probable cinnamyl alcohol dehydrogenase 1 OS=Aralia cordata GN=CAD1 PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.822e-41
Identity = 86/156 (55.13%), Postives = 110/156 (70.51%), Query Frame = -2
Query:  224 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT 691
            K AKAMG  VTVIS+S  KK EAI+ LGAD++LVS D  +MQ A  ++D IIDTV   HPL P + LLK  GKL+L+G    PL+  +  +++GRK + GS IG MKET+EM+DF  +  I + IEV+  DY+NTA ERL K DVRYRFV+DVA +
Sbjct:  199 KLAKAMGHHVTVISSSDKKKEEAIDHLGADAYLVSSDATQMQEAADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFISPMVMLGRKAITGSFIGSMKETEEMLDFCNEKGITSTIEVVKMDYINTAFERLEKNDVRYRFVVDVAGS 354          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CADH_PINTA (Probable cinnamyl alcohol dehydrogenase OS=Pinus taeda PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.520e-41
Identity = 82/156 (52.56%), Postives = 113/156 (72.44%), Query Frame = -2
Query:  224 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT 691
            K AKA G+ VTVIS+S  KK EA+E LGAD++LVS+D ++M  A  ++D I+DT+   HPL P + LLK+ GKLV++G   +PL      L++GR+ + GS IGGM+ETQE +DF A+  + + IEV+  DY+NTA+ERL K DVRYRFV+DVA +
Sbjct:  198 KIAKAFGLHVTVISSSDKKKEEAMEVLGADAYLVSKDTEKMMEAAESLDYIMDTIPVAHPLEPYLALLKTNGKLVMLGVVPEPLHFVTPPLILGRRSIAGSFIGGMEETQETLDFCAEKKVSSMIEVVGLDYINTAMERLEKNDVRYRFVVDVAGS 353          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CADH2_PICAB (Probable cinnamyl alcohol dehydrogenase 2 OS=Picea abies GN=CAD2 PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.520e-41
Identity = 82/156 (52.56%), Postives = 113/156 (72.44%), Query Frame = -2
Query:  224 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT 691
            K AKA G+ VTVIS+S  KK EA+E LGAD++LVS+D ++MQ A  ++D I+DT+   HPL P + LLK+ GKLV++G   +PL      L++GR+ + GS IG M+ETQE +DF A+  + + IEV+  DY+NTA+ERL K DVRYRFV+DVA +
Sbjct:  198 KIAKAFGLHVTVISSSDKKKEEALEVLGADAYLVSKDAEKMQEAAESLDYIMDTIPVAHPLEPYLALLKTNGKLVMLGVVPEPLHFVTPLLILGRRSIAGSFIGSMEETQETLDFCAEKKVSSMIEVVGLDYINTAMERLVKNDVRYRFVVDVARS 353          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CADH7_PICAB (Probable cinnamyl alcohol dehydrogenase 7/8 OS=Picea abies GN=CAD7 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 8.515e-41
Identity = 82/154 (53.25%), Postives = 112/154 (72.73%), Query Frame = -2
Query:  230 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVA 691
            K AKA G+ VTVIS+S  KK EA+E LGAD++LVS+D ++MQ A  ++D I+DT+   HPL P + LLK+ GKLV++G   +PL      L++GR+ + GS IG M+ETQE +DF A+  + + IEV+  DY+NTA+ERL K DVRYRFV+DVA
Sbjct:  198 KIAKAFGLHVTVISSSDKKKEEALEVLGADAYLVSKDAEKMQEAAESLDYIMDTIPVAHPLEPYLALLKTNGKLVMLGVVPEPLHFVTPLLILGRRSIAGSFIGSMEETQETLDFCAEKKVSSMIEVVGLDYINTAMERLVKNDVRYRFVVDVA 351          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CADH_EUCBO (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus botryoides GN=CAD1 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.112e-40
Identity = 84/156 (53.85%), Postives = 112/156 (71.79%), Query Frame = -2
Query:  224 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT 691
            K AKAMG  VTVIS+S  K++EA+E LGAD++LVS D++ M+ A  ++D I DT+  VHPL P + LLK  GKL+L G    PL+  +  +++GRK + GS IG MKET+EM++F  +  + + IEVI  DYVNTALERL K DVRYRFV+DVA +
Sbjct:  197 KIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVRYRFVVDVAGS 352          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CADH1_TOBAC (Probable cinnamyl alcohol dehydrogenase 1 OS=Nicotiana tabacum GN=CAD14 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.112e-40
Identity = 83/153 (54.25%), Postives = 109/153 (71.24%), Query Frame = -2
Query:  233 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDV 691
            K AKAMG  VTVIS+S  K+ EA+E LGAD +LVS D D+MQ A  ++D IIDTV   HPL P + LLK  GKL+L+G    PL+  +  +++GRK + GS IG MKET+EM+DF  +  + + IE++  DY+NTA+ERL K DVRYRFV+DV
Sbjct:  198 KIAKAMGHHVTVISSSNKKRQEALEHLGADDYLVSSDTDKMQEASDSLDYIIDTVPVGHPLEPYLSLLKIDGKLILMGVINTPLQFISPMVMLGRKSITGSFIGSMKETEEMLDFCKEKGVTSQIEIVKMDYINTAMERLEKNDVRYRFVVDV 350          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CADH_POPDE (Probable cinnamyl alcohol dehydrogenase OS=Populus deltoides PE=2 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 2.477e-40
Identity = 85/156 (54.49%), Postives = 108/156 (69.23%), Query Frame = -2
Query:  224 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT 691
            K AKAMG  VTVIS+S  K+ EA+E LGAD +LVS D + MQ A   +D IIDTV  VHPL P + LLK  GKL+L+G    PL+     +++GRK + GS IG MKET+EM++F  +  + + IEVI  DY+NTA ERL K DVRYRFV+DVA +
Sbjct:  198 KIAKAMGHHVTVISSSDKKREEAMEHLGADEYLVSSDVESMQKAADQLDYIIDTVPVVHPLEPYLSLLKLDGKLILMGVINAPLQFVTPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGVASMIEVIKMDYINTAFERLEKNDVRYRFVVDVAGS 353          
The following BLAST results are available for this feature:
BLAST of CN184771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
CAD8D_ORYSJ5.506e-4860.51Probable cinnamyl alcohol dehydrogenase 8D OS=Oryz... [more]
CADH6_ORYSJ1.227e-4760.76Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza... [more]
CAD8A_ORYSJ1.038e-4661.15Probable cinnamyl alcohol dehydrogenase 8A OS=Oryz... [more]
CADH1_ARACO3.822e-4155.13Probable cinnamyl alcohol dehydrogenase 1 OS=Arali... [more]
CADH_PINTA6.520e-4152.56Probable cinnamyl alcohol dehydrogenase OS=Pinus t... [more]
CADH2_PICAB6.520e-4152.56Probable cinnamyl alcohol dehydrogenase 2 OS=Picea... [more]
CADH7_PICAB8.515e-4153.25Probable cinnamyl alcohol dehydrogenase 7/8 OS=Pic... [more]
CADH_EUCBO1.112e-4053.85Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH1_TOBAC1.112e-4054.25Probable cinnamyl alcohol dehydrogenase 1 OS=Nicot... [more]
CADH_POPDE2.477e-4054.49Probable cinnamyl alcohol dehydrogenase OS=Populus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006B04_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184771 ID=CN184771; Name=CN184771; organism=Citrus sinensis; type=EST; length=737bp
GAGGGTAAAAACTAACATATAGCTCGCTATTACATAAATTTGTCACACAG
ATGGAATATACGTCACCAAATTATTATTCTTAAAAAGCAAAAACAGATTT
GAAATCACAACAAAAGACTAACATAATCTAAAACTTAGACGATGTTGTGA
CTCGACAATAAACGCACATTCCTCATTTTAAGCGCAACTCAAAAGGAAGA
AAATTTTAAGGGGTGGACTTCATTGTGTTTGCAACGTCGATGACAAAGCG
ATATCTAACATCGGCTTTAGCAAGGCGCTCCAGGGCTGTGTTCACATAGT
CGGCCGGTATGACCTCAATATCAGCTCTGATGTTGTGTTTTGCCGCAAAA
TCAATCATCTCTTGAGTCTCCTTCATCCCCCCAATCATGCTGCCACCAAC
TATCTTCCTCCCCATGAGCAGGGAGAAAGCTGGTAGCTCCAGTGGCTTCT
CTGGTGCACCAACAAGTACAAGCTTTCCTTGAGATTTCAACAGTCCAATC
AACGGCATTAGAGGGTGAACTGCAGATACTGTATCGATAATACCATCCAT
TGTGCCCATGGCAGCCTGCATCTCATCTTGATCACGACTGACCAAAAAGG
AATCAGCGCCAAGACGTTCAATGGCTTCACTCTTCTTGCTAGGGGAGGTA
CTGATCACAGTCACCTTGACCCCCATAGCCTTTGCGAATTTGACGGCGAC
ATGGCCTAGACCGCCCAAGCCGACAACACCCACATGC
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