CN184771

Overview
NameCN184771
Unique NameCN184771
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CADH_EUCGL (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus globulus GN=CAD PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.236e-40
Identity = 83/156 (53.21%), Postives = 111/156 (71.15%), Query Frame = -2
Query:  224 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT 691
            K AKAMG  VTVIS+S  K++EA+E LGAD++LVS D++ M+ A  ++D I DT+  VHPL P + LLK  GKL+L G    PL+  +  +++GRK + GS IG MKET+EM++F  +  + + IEVI  DYVNTALERL K DVRYRFV+DV  +
Sbjct:  198 KIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVRYRFVVDVVGS 353          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CADH2_EUCGU (Probable cinnamyl alcohol dehydrogenase 2 OS=Eucalyptus gunnii GN=CAD2 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.236e-40
Identity = 83/156 (53.21%), Postives = 111/156 (71.15%), Query Frame = -2
Query:  224 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT 691
            K AKAMG  VTVIS+S  K++EA+E LGAD++LVS D++ M+ A  ++D I DT+  VHPL P + LLK  GKL+L G    PL+  +  +++GRK + GS IG MKET+EM++F  +  + + IEVI  DYVNTALERL K DVRYRFV+DV  +
Sbjct:  198 KIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVRYRFVVDVVGS 353          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CADH_PINRA (Probable cinnamyl alcohol dehydrogenase OS=Pinus radiata GN=CAD PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.226e-40
Identity = 81/156 (51.92%), Postives = 112/156 (71.79%), Query Frame = -2
Query:  224 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT 691
            K AKA G+ VTVIS+S  KK EA+E LGAD++LVS+D ++M  A  ++D I+DT+   HPL P + LLK+ GKLV++G   +PL      L++GR+ + GS IG M+ETQE +DF A+  + + IEV+  DY+NTA+ERL K DVRYRFV+DVA +
Sbjct:  198 KIAKAFGLHVTVISSSDKKKEEAMEVLGADAYLVSKDTEKMMEAAESLDYIMDTIPVAHPLEPYLALLKTNGKLVMLGVVPEPLHFVTPLLILGRRSIAGSFIGSMEETQETLDFCAEKKVSSMIEVVGLDYINTAMERLEKNDVRYRFVVDVAGS 353          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CADH2_TOBAC (Probable cinnamyl alcohol dehydrogenase 2 OS=Nicotiana tabacum GN=CAD19 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.230e-39
Identity = 82/156 (52.56%), Postives = 109/156 (69.87%), Query Frame = -2
Query:  224 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT 691
            K AKAMG  VTVIS+S  K+ EA+E LGAD +LVS D D+MQ A  ++D IIDTV   HPL   + LLK  GKL+L+G    PL+  +  +++GRK + GS IG MKET+EM+DF  +  + + IE++  DY+NTA+ERL K DV YRFV+DVA +
Sbjct:  198 KIAKAMGHHVTVISSSNKKRQEALEHLGADDYLVSSDTDKMQEAADSLDYIIDTVPVGHPLELYLSLLKIDGKLILIGVINTPLQFISPMVMLGRKSITGSFIGSMKETEEMLDFCKEKGVTSQIEIVKMDYINTAMERLEKNDVSYRFVVDVAGS 353          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CADH1_OCIBA (Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilicum GN=CAD1 PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.041e-38
Identity = 80/156 (51.28%), Postives = 108/156 (69.23%), Query Frame = -2
Query:  224 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT 691
            K AKAMG  VTVIS+S  K++EA++ LGAD +LVS D   MQ A  ++D IIDTV   HPL P + LLK  GKL+L+G    PL+  +  +++GRK + GS IG MKE  EM++F  + ++ + IE++  DY+NTA ERL K DVRYRFV+DVA +
Sbjct:  198 KIAKAMGHHVTVISSSDKKRAEALDHLGADDYLVSSDAARMQEAADSLDYIIDTVPVFHPLEPYLSLLKIDGKLILMGVVNTPLQFVSPMVMLGRKSITGSFIGSMKELAEMLEFCKEKDLSSTIEIVKMDYINTAFERLEKNDVRYRFVVDVAGS 353          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CADH_LOLPR (Probable cinnamyl alcohol dehydrogenase OS=Lolium perenne PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.564e-37
Identity = 79/156 (50.64%), Postives = 110/156 (70.51%), Query Frame = -2
Query:  224 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT 691
            K AK+MG  VTVIS+S  K++EA++ LGAD +LVS D+ +M AAM ++D IIDTV   HPL P + LLK  GKLVL+G   +PL   +  +++GRK + GS IG ++ET+E++ F     + + IEV+  DY+N ALERL + DVRYRFV+DVA +
Sbjct:  199 KVAKSMGHHVTVISSSDKKRAEAMDDLGADDYLVSSDEAQMAAAMDSLDYIIDTVPVKHPLEPYLALLKMDGKLVLMGVIGEPLSFVSPMVMLGRKTITGSFIGSIEETEEVLRFCVDKGLTSQIEVVKMDYLNQALERLERNDVRYRFVVDVAGS 354          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CADH1_EUCGU (Probable cinnamyl alcohol dehydrogenase 1 OS=Eucalyptus gunnii GN=CAD1 PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.711e-37
Identity = 80/156 (51.28%), Postives = 108/156 (69.23%), Query Frame = -2
Query:  224 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT 691
            K AKAMG  VTVIS+S  K++EA+E LGAD++LVS D++ M+ A  ++D + DT+  VHPL P + LLK  GKL+L G    PL+    S ++  + + GS IG MKET+EM++F  +  + + IEVI  DYVNTALERL K DVRYRFV+DV  +
Sbjct:  198 KIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYVFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQF--ISPMVMLESITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVRYRFVVDVVGS 351          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CADH5_ARATH (Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis thaliana GN=CAD5 PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.272e-36
Identity = 77/153 (50.33%), Postives = 104/153 (67.97%), Query Frame = -2
Query:  233 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDV 691
            K AKAMG  VTVIS+S  K+ EA++ LGAD +++  DQ +M     ++D +IDTV   H L P + LLK  GKL+L+G    PL+     L++GRK++ GS IG MKET+EM++F  +  + + IEV+  DYVNTA ERL K DVRYRFV+DV
Sbjct:  198 KIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVITGSFIGSMKETEEMLEFCKEKGLSSIIEVVKMDYVNTAFERLEKNDVRYRFVVDV 350          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CADH_MEDSA (Probable cinnamyl alcohol dehydrogenase OS=Medicago sativa GN=CAD2 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.170e-36
Identity = 78/153 (50.98%), Postives = 105/153 (68.63%), Query Frame = -2
Query:  233 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDV 691
            K AKA+G  VTVIS+S  KK EA+E LGAD++LVS D   MQ A  ++D IIDTV   HPL P + LLK  GKL+L+G    PL+     +++GRK + GS +G +KET+EM++F  +  + + IE++  DY+N A ERL K DVRYRFV+DV
Sbjct:  199 KVAKALGHHVTVISSSDKKKKEALEDLGADNYLVSSDTVGMQEAADSLDYIIDTVPVGHPLEPYLSLLKIDGKLILMGVINTPLQFVTPMVMLGRKSITGSFVGSVKETEEMLEFWKEKGLTSMIEIVTMDYINKAFERLEKNDVRYRFVVDV 351          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CADH2_ORYSJ (Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=CAD2 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.835e-36
Identity = 79/156 (50.64%), Postives = 107/156 (68.59%), Query Frame = -2
Query:  224 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT 691
            K AK+MG  VTVIS+S  K+ EA++ LGAD++LVS D   M AA  ++D IIDTV   HPL P + LLK  GKL+L+G   +PL   +  +++GRK + GS IG M ET+E+++F     + + IEV+  DYVN ALERL + DVRYRFV+DVA +
Sbjct:  198 KVAKSMGHHVTVISSSARKRGEAMDDLGADAYLVSSDAAAMAAAGDSLDYIIDTVPVHHPLEPYLALLKLDGKLILMGVINQPLSFISPMVMLGRKAITGSFIGSMAETEEVLNFCVDKGLTSQIEVVKMDYVNQALERLERNDVRYRFVVDVAGS 353          
The following BLAST results are available for this feature:
BLAST of CN184771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
CADH_EUCGL3.236e-4053.21Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH2_EUCGU3.236e-4053.21Probable cinnamyl alcohol dehydrogenase 2 OS=Eucal... [more]
CADH_PINRA4.226e-4051.92Probable cinnamyl alcohol dehydrogenase OS=Pinus r... [more]
CADH2_TOBAC1.230e-3952.56Probable cinnamyl alcohol dehydrogenase 2 OS=Nicot... [more]
CADH1_OCIBA1.041e-3851.28Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilic... [more]
CADH_LOLPR2.564e-3750.64Probable cinnamyl alcohol dehydrogenase OS=Lolium ... [more]
CADH1_EUCGU5.711e-3751.28Probable cinnamyl alcohol dehydrogenase 1 OS=Eucal... [more]
CADH5_ARATH1.272e-3650.33Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis th... [more]
CADH_MEDSA2.170e-3650.98Probable cinnamyl alcohol dehydrogenase OS=Medicag... [more]
CADH2_ORYSJ2.835e-3650.64Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006B04_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184771 ID=CN184771; Name=CN184771; organism=Citrus sinensis; type=EST; length=737bp
GAGGGTAAAAACTAACATATAGCTCGCTATTACATAAATTTGTCACACAG
ATGGAATATACGTCACCAAATTATTATTCTTAAAAAGCAAAAACAGATTT
GAAATCACAACAAAAGACTAACATAATCTAAAACTTAGACGATGTTGTGA
CTCGACAATAAACGCACATTCCTCATTTTAAGCGCAACTCAAAAGGAAGA
AAATTTTAAGGGGTGGACTTCATTGTGTTTGCAACGTCGATGACAAAGCG
ATATCTAACATCGGCTTTAGCAAGGCGCTCCAGGGCTGTGTTCACATAGT
CGGCCGGTATGACCTCAATATCAGCTCTGATGTTGTGTTTTGCCGCAAAA
TCAATCATCTCTTGAGTCTCCTTCATCCCCCCAATCATGCTGCCACCAAC
TATCTTCCTCCCCATGAGCAGGGAGAAAGCTGGTAGCTCCAGTGGCTTCT
CTGGTGCACCAACAAGTACAAGCTTTCCTTGAGATTTCAACAGTCCAATC
AACGGCATTAGAGGGTGAACTGCAGATACTGTATCGATAATACCATCCAT
TGTGCCCATGGCAGCCTGCATCTCATCTTGATCACGACTGACCAAAAAGG
AATCAGCGCCAAGACGTTCAATGGCTTCACTCTTCTTGCTAGGGGAGGTA
CTGATCACAGTCACCTTGACCCCCATAGCCTTTGCGAATTTGACGGCGAC
ATGGCCTAGACCGCCCAAGCCGACAACACCCACATGC
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