CN184771

Overview
NameCN184771
Unique NameCN184771
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CADH4_ARATH (Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis thaliana GN=CAD4 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.702e-36
Identity = 78/156 (50.00%), Postives = 103/156 (66.03%), Query Frame = -2
Query:  224 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT 691
            K AKAMG  VTVIS+S  KK EAIE LGAD ++VS D  EMQ    ++D IIDTV   HPL P +  LK  GKL+L+G    PL+     +++GRK++ GS IG +KET+E++ F  +  + + IE +  D +N A ERL K DVRYRFV+DVA +
Sbjct:  199 KIAKAMGHHVTVISSSDKKKEEAIEHLGADDYVVSSDPAEMQRLADSLDYIIDTVPVFHPLDPYLACLKLDGKLILMGVINTPLQFVTPLVILGRKVISGSFIGSIKETEEVLAFCKEKGLTSTIETVKIDELNIAFERLRKNDVRYRFVVDVAGS 354          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CADH_MAIZE (Probable cinnamyl alcohol dehydrogenase OS=Zea mays GN=CAD PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.407e-35
Identity = 79/156 (50.64%), Postives = 105/156 (67.31%), Query Frame = -2
Query:  224 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT 691
            K AKAMG  VTVIS+S  K++EA++ LGAD++LVS D   M AA  ++D IIDTV   HPL P + LLK  GKLVL+G   +PL   +  +++GRK + GS IG + ET E++ F     + + IEV+   YVN ALERL + DVRYRFV+DVA +
Sbjct:  198 KVAKAMGHHVTVISSSSKKRAEAMDHLGADAYLVSSDAAAMAAAADSLDYIIDTVPVHHPLEPYLALLKLDGKLVLLGVIGEPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVDVAGS 353          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CADH1_ARATH (Probable cinnamyl alcohol dehydrogenase 1 OS=Arabidopsis thaliana GN=CAD1 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.134e-35
Identity = 75/158 (47.47%), Postives = 108/158 (68.35%), Query Frame = -2
Query:  218 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMK 691
            KF KA G+ VTV STS SKK EA+  LGA++F++S D D+M+A   ++D ++DT S  H   P + LLK  G  VLVG P + +++   +L +G +++ GS+ GG K TQ+M+DF A H I  +IEVIP   +N ALER+ K D++YRFVID+ N++K
Sbjct:  199 KFGKAFGLSVTVFSTSISKKEEALNLLGAENFVISSDHDQMKALEKSLDFLVDTASGDHAFDPYMSLLKIAGTYVLVGFPSE-IKISPANLNLGMRMLAGSVTGGTKITQQMLDFCAAHKIYPNIEVIPIQKINEALERVVKKDIKYRFVIDIKNSLK 355          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CADH1_ORYSJ (Probable cinnamyl alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=CAD1 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 9.118e-35
Identity = 78/158 (49.37%), Postives = 108/158 (68.35%), Query Frame = -2
Query:  218 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMK 691
            KF KA G+KVTVISTS SK+ EAI+ LGAD+F+VS D+++M+    +++ IIDT S  HP  P + LLK  G + L+  P +    PA +L +G + + GS+ GG K+ QEMI+F A + I  DIE+I  DY+N AL+RL   DVR+RFVID+ N+ K
Sbjct:  198 KFGKAFGLKVTVISTSESKRKEAIDLLGADNFVVSSDENQMETLKSSLNFIIDTASGDHPFDPYLTLLKVGGVMALLSFPSEIKVHPA-NLNLGGRSLSGSVTGGTKDIQEMINFCAANKIYPDIEMIKIDYINEALQRLVDRDVRFRFVIDIENSFK 354          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CADH_SACOF (Probable cinnamyl alcohol dehydrogenase OS=Saccharum officinarum GN=CAD PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.031e-34
Identity = 77/156 (49.36%), Postives = 104/156 (66.67%), Query Frame = -2
Query:  224 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT 691
            K AKAMG  VTVIS+S  K++EA++ LGAD++LVS D   M AA  ++D IIDTV   HPL P + LLK  GK VL+G   +PL   +  +++GRK + GS IG + ET E++ F     + + IEV+   YVN AL+RL + DVRYRFV+DVA +
Sbjct:  198 KVAKAMGHHVTVISSSSKKRAEAMDHLGADAYLVSSDAAAMAAAADSLDYIIDTVPVHHPLEPYLALLKLDGKHVLLGVIGEPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALDRLERNDVRYRFVVDVAGS 353          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: ADHA_BACSU (Probable formaldehyde dehydrogenase adhA OS=Bacillus subtilis GN=adhA PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.525e-34
Identity = 77/154 (50.00%), Postives = 106/154 (68.83%), Query Frame = -2
Query:  230 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVA 691
            +FA AMG +VTV+S S +KK EA+E LGA+ +  + D     A  G  D I++TVSA   +   + +L+  G LV VGAP KP     FSL+MGR+ + GS++GG++ETQEM+DFAA+H I   IEVI AD V+ A ER+ ++DVRYRFVID++
Sbjct:  195 QFAHAMGAEVTVLSRSMNKKEEALE-LGANHYFATSDPATFTALAGRFDVILNTVSANLDVDAYLSMLRIDGTLVSVGAPAKPDTYSVFSLIMGRRSIAGSLVGGIQETQEMLDFAAEHGIEPKIEVIGADQVDEAYERILRSDVRYRFVIDIS 347          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CADH4_ORYSJ (Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza sativa subsp. japonica GN=CAD4 PE=3 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 2.246e-33
Identity = 74/158 (46.84%), Postives = 107/158 (67.72%), Query Frame = -2
Query:  218 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMK 691
            KF KA G+KVTV STS SK+ EAI  LGAD+F++S D+++M++   ++  IIDT S  H   P + LLK  G +VL+  P + +++   +L +  + + GS+ GG K+ QEMI+F A +N+  DIE+I  DYVN AL+RL   DVR+RFVID+ N+ K
Sbjct:  198 KFGKAFGLKVTVFSTSESKREEAINLLGADNFVISSDENQMESLKSSLHFIIDTASGDHQFDPYLSLLKVGGVMVLLSFPSE-IKVHPENLNLAARSLAGSVTGGTKDIQEMINFCAANNVYPDIEMIKIDYVNEALQRLINRDVRFRFVIDIENSFK 354          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: YAHK_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yahK OS=Escherichia coli (strain K12) GN=yahK PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.831e-33
Identity = 78/153 (50.98%), Postives = 103/153 (67.32%), Query Frame = -2
Query:  236 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELP-AFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVID 691
            K A AMG  V   +TS +K+ EA + LGAD  + SR+ DEM A + + D I++TV+A H L     LLK  G + LVGAP  P + P  F+L+M R+ + GSMIGG+ ETQEM+DF A+H I ADIE+I AD +N A ER+ + DV+YRFVID
Sbjct:  192 KLAHAMGAHVVAFTTSEAKR-EAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGIVADIEMIRADQINEAYERMLRGDVKYRFVID 343          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: ADHC_MYCTU (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium tuberculosis GN=adhC PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.832e-30
Identity = 70/154 (45.45%), Postives = 98/154 (63.64%), Query Frame = -2
Query:  230 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVA 691
            K   AMG  VTV+S S  K  + + RLGA S+  + D D  +   G  D I++TVSA   L   + LL   G LV +G PE P+ +PAF+L + R+ + GS IGG+ ETQEM++F A+H +  +IE+I  DY+N A ER+  +DVRYRFVID++
Sbjct:  192 KLGAAMGADVTVLSQSLKKMEDGL-RLGAKSYYATADPDTFRKLRGGFDLILNTVSANLDLGQYLNLLDVDGTLVELGIPEHPMAVPAFALALMRRSLAGSNIGGIAETQEMLNFCAEHGVTPEIELIEPDYINDAYERVLASDVRYRFVIDIS 344          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: ADHC_MYCBO (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium bovis GN=adhC PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.832e-30
Identity = 70/154 (45.45%), Postives = 98/154 (63.64%), Query Frame = -2
Query:  230 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVA 691
            K   AMG  VTV+S S  K  + + RLGA S+  + D D  +   G  D I++TVSA   L   + LL   G LV +G PE P+ +PAF+L + R+ + GS IGG+ ETQEM++F A+H +  +IE+I  DY+N A ER+  +DVRYRFVID++
Sbjct:  192 KLGAAMGADVTVLSQSLKKMEDGL-RLGAKSYYATADPDTFRKLRGGFDLILNTVSANLDLGQYLNLLDVDGTLVELGIPEHPMAVPAFALALMRRSLAGSNIGGIAETQEMLNFCAEHGVTPEIELIEPDYINDAYERVLASDVRYRFVIDIS 344          
The following BLAST results are available for this feature:
BLAST of CN184771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
CADH4_ARATH3.702e-3650.00Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis th... [more]
CADH_MAIZE1.407e-3550.64Probable cinnamyl alcohol dehydrogenase OS=Zea may... [more]
CADH1_ARATH3.134e-3547.47Probable cinnamyl alcohol dehydrogenase 1 OS=Arabi... [more]
CADH1_ORYSJ9.118e-3549.37Probable cinnamyl alcohol dehydrogenase 1 OS=Oryza... [more]
CADH_SACOF2.031e-3449.36Probable cinnamyl alcohol dehydrogenase OS=Sacchar... [more]
ADHA_BACSU4.525e-3450.00Probable formaldehyde dehydrogenase adhA OS=Bacill... [more]
CADH4_ORYSJ2.246e-3346.84Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza... [more]
YAHK_ECOLI3.831e-3350.98Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
ADHC_MYCTU8.832e-3045.45NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
ADHC_MYCBO8.832e-3045.45NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006B04_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184771 ID=CN184771; Name=CN184771; organism=Citrus sinensis; type=EST; length=737bp
GAGGGTAAAAACTAACATATAGCTCGCTATTACATAAATTTGTCACACAG
ATGGAATATACGTCACCAAATTATTATTCTTAAAAAGCAAAAACAGATTT
GAAATCACAACAAAAGACTAACATAATCTAAAACTTAGACGATGTTGTGA
CTCGACAATAAACGCACATTCCTCATTTTAAGCGCAACTCAAAAGGAAGA
AAATTTTAAGGGGTGGACTTCATTGTGTTTGCAACGTCGATGACAAAGCG
ATATCTAACATCGGCTTTAGCAAGGCGCTCCAGGGCTGTGTTCACATAGT
CGGCCGGTATGACCTCAATATCAGCTCTGATGTTGTGTTTTGCCGCAAAA
TCAATCATCTCTTGAGTCTCCTTCATCCCCCCAATCATGCTGCCACCAAC
TATCTTCCTCCCCATGAGCAGGGAGAAAGCTGGTAGCTCCAGTGGCTTCT
CTGGTGCACCAACAAGTACAAGCTTTCCTTGAGATTTCAACAGTCCAATC
AACGGCATTAGAGGGTGAACTGCAGATACTGTATCGATAATACCATCCAT
TGTGCCCATGGCAGCCTGCATCTCATCTTGATCACGACTGACCAAAAAGG
AATCAGCGCCAAGACGTTCAATGGCTTCACTCTTCTTGCTAGGGGAGGTA
CTGATCACAGTCACCTTGACCCCCATAGCCTTTGCGAATTTGACGGCGAC
ATGGCCTAGACCGCCCAAGCCGACAACACCCACATGC
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