CN184766

Overview
NameCN184766
Unique NameCN184766
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length817
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10082 contig Csv1_Contig10082:20..836. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184766 vs. ExPASy Swiss-Prot
Match: PSMR_SULIA (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.27) GN=pan PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.924e-56
Identity = 114/262 (43.51%), Postives = 171/262 (65.27%), Query Frame = 3
Query:   30 MSEGEDAVRRRNAMTEYRKKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 815
            MS   D +R  ++  E +   L    +E +++S++  +   +KE N  + +++ + S   I   VL  L + R++V++SSGP  VV   S +D++ +  G  V L+    TI+  LP++ DP+V  M   +  NV+YS +GGL +QI+ELRE +ELPL  PE+F  +G++PPKGVLLYGPPGTGKT+LA+A+A+  +A F+ VV+S    K++GE AR++RE+F  A+   P IIF+DEIDAIG +R   GTS +REIQRTL
Sbjct:    1 MSGDFDTIRDASSSDEVQLVRL----LEEKIKSLQIEIENLRKELNYYKAEMEKMLSPPLIEAVVLDVLPDGRVLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTL 258          
BLAST of CN184766 vs. ExPASy Swiss-Prot
Match: PSMR_METPE (Proteasome-activating nucleotidase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 4.988e-56
Identity = 111/248 (44.76%), Postives = 164/248 (66.13%), Query Frame = 3
Query:   72 TEYRKKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 815
            TE R++L   ++IE+  R ++      ++E  K + +++ ++S   +IG V   +D  R+IV++S+GPR++VG    ++ E++  G R  L+  +L I+  LP   D  +Y M   +  +  Y  +GGL  QI E+RE++ELPL  PE+F ++GI+PPKGVLL+GPPGTGKTLLARA+A   +A+FL+VV S ++ KYIGE ARL+RE+F  A+   P IIF+DEIDAIG  R    TS DRE+ RTL
Sbjct:   33 TELREQL---RQIEADKRYLETQKVRYEREVRKFKGEIEQMKSPPLVIGTVTDLIDENRVIVRSSAGPRFLVGISQSLNIEEIKPGARCTLNQQSLAIVEILPTNYDAQIYGMEVIEAPSERYEEIGGLEKQINEIREAVELPLKKPEVFRKMGIEPPKGVLLHGPPGTGKTLLARAVAHQTEAHFLRVVGSELVQKYIGEGARLVRELFELAKKKSPSIIFIDEIDAIGASRTESNTSGDREVHRTL 277          
BLAST of CN184766 vs. ExPASy Swiss-Prot
Match: PSMR_METMP (Proteasome-activating nucleotidase OS=Methanococcus maripaludis GN=pan PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.475e-55
Identity = 114/265 (43.02%), Postives = 174/265 (65.66%), Query Frame = 3
Query:   45 DAVRRRNAMTEYRKKLLQHKEIESRVRSV--------KENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 815
            D  + +  + E+++K  Q  E+ES+V  +        +EN++  KKE    + +L  L+    I+G +L  ++  + +VK+S+GP ++V     VD E +  G RV L+  TL I+  LP+E D     M  E+  ++S+  +GGL++QIR+++E +ELPL NPELF +VGI PPKGVLLYGPPGTGKTLLA+A+A   +A+F++VV S ++ K+IGE A+L+R++F  A++  PCIIF+DEIDA+  +R    T  DRE+QRTL
Sbjct:   10 DIEKNKMDLKEFKEKT-QIAELESKVLRLELKNKDINRENVQI-KKENEILKRELDKLRIPPLILGTILDKVNERKAVVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTL 272          
BLAST of CN184766 vs. ExPASy Swiss-Prot
Match: PSMR_METM7 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=pan PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.475e-55
Identity = 114/265 (43.02%), Postives = 174/265 (65.66%), Query Frame = 3
Query:   45 DAVRRRNAMTEYRKKLLQHKEIESRVRSV--------KENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 815
            D  + +  + E+++K  Q  E+ES+V  +        +EN++  KKE    + +L  L+    I+G +L  ++  + +VK+S+GP ++V     VD E +  G RV L+  TL I+  LP+E D     M  E+  ++S+  +GGL++QIR+++E +ELPL NPELF +VGI PPKGVLLYGPPGTGKTLLA+A+A   +A+F++VV S ++ K+IGE A+L+R++F  A++  PCIIF+DEIDA+  +R    T  DRE+QRTL
Sbjct:   10 DIEKNKMDLKEFKEKT-QIAELESKVLRLELKNKDVTRENVQI-KKENEILKRELDKLRIPPLILGTILDKVNERKAVVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTL 272          
BLAST of CN184766 vs. ExPASy Swiss-Prot
Match: PSMR_METM6 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pan PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.475e-55
Identity = 114/265 (43.02%), Postives = 174/265 (65.66%), Query Frame = 3
Query:   45 DAVRRRNAMTEYRKKLLQHKEIESRVRSV--------KENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 815
            D  + +  + E+++K  Q  E+ES+V  +        +EN++  KKE    + +L  L+    I+G +L  ++  + +VK+S+GP ++V     VD E +  G RV L+  TL I+  LP+E D     M  E+  ++S+  +GGL++QIR+++E +ELPL NPELF +VGI PPKGVLLYGPPGTGKTLLA+A+A   +A+F++VV S ++ K+IGE A+L+R++F  A++  PCIIF+DEIDA+  +R    T  DRE+QRTL
Sbjct:   10 DVEKNKMDLKEFKEKT-QIAELESKVLRLELKNKDISRENVQI-KKENEILKRELDKLRIPPLILGTILDRVNERKAVVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTL 272          
BLAST of CN184766 vs. ExPASy Swiss-Prot
Match: PSMR_METM5 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 7.203e-55
Identity = 113/265 (42.64%), Postives = 174/265 (65.66%), Query Frame = 3
Query:   45 DAVRRRNAMTEYRKKLLQHKEIESRVRSV--------KENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 815
            D  + +  + E+++K  Q  E+ES+V  +        +EN++  KKE    + +L  L+    I+G +L  ++  + +VK+S+GP ++V     VD + +  G RV L+  TL I+  LP+E D     M  E+  ++S+  +GGL++QIR+++E +ELPL NPELF +VGI PPKGVLLYGPPGTGKTLLA+A+A   +A+F++VV S ++ K+IGE A+L+R++F  A++  PCIIF+DEIDA+  +R    T  DRE+QRTL
Sbjct:   10 DIEKNKMDLKEFKEKT-QIAELESKVLRLELKNKDISRENVQI-KKENEILKRELDKLRIPPLILGTILDRVNERKAVVKSSTGPNFLVNLSQFVDPDDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTL 272          
BLAST of CN184766 vs. ExPASy Swiss-Prot
Match: PSMR_SULTO (Proteasome-activating nucleotidase OS=Sulfolobus tokodaii GN=pan PE=3 SV=2)

HSP 1 Score: 213.386 bits (542), Expect = 1.229e-54
Identity = 111/236 (47.03%), Postives = 156/236 (66.10%), Query Frame = 3
Query:  108 IESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 815
            +E ++ S+ + L   +++ N  + +L+ L +   I   VL  L + ++IV++SSGP  +V   S +D +KL  G+ V L     TI+  LP   D  V +    +  NV YS +GGL++QI E+RE IELPL NPELF  +GI PPKGVLLYGPPGTGKTLLA+A+A+  +A F++VV+S    K++GE AR++RE+F  AR   P I+F+DEIDAIG +R   GTS +REIQRTL
Sbjct:   23 LEEKIESLTKELEKLRQDLNWYKGELEKLLAPPYIEAIVLDILPDGKVIVRSSSGPNLIVNVSSNIDIKKLKPGSLVALTQRGSTIVEVLPEREDAYVKSFEVIEKPNVHYSDIGGLNEQINEIREVIELPLKNPELFKEIGIDPPKGVLLYGPPGTGKTLLAKAVATESNATFIQVVASEFAQKFVGEGARIVREVFELARRKAPSIVFIDEIDAIGAKRVDMGTSGEREIQRTL 258          
BLAST of CN184766 vs. ExPASy Swiss-Prot
Match: PSMR_METHJ (Proteasome-activating nucleotidase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pan PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 6.097e-54
Identity = 106/240 (44.17%), Postives = 155/240 (64.58%), Query Frame = 3
Query:   96 QHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 815
            Q +++ES  R ++      ++E  K + +++ L++   I+G +   +D+ R++V++S+GPR++V     V+   L +G R  L+  +L I+  LP   D  VY M   D    +Y  +GGL  QI E+RE++ELP+  P+LF ++GI PPKGVLLYGPPGTGKTLLA+A+A    A FL  V S ++ KYIGE ARL+RE+F  A++  P I+F+DEIDAIG  R    TS DRE+QRTL
Sbjct:   38 QIRQLESDKRYIETQKIRYEREVRKLKSEIEHLKTPPLIVGTITDIIDSGRVVVRSSAGPRFLVRVSQAVNPTTLKAGVRCTLNQQSLAIVEVLPSTYDSQVYGMELVDAPTETYEDIGGLEKQIMEIREAVELPMTRPDLFEKIGINPPKGVLLYGPPGTGKTLLAKAVAHETHAIFLHTVGSELVQKYIGEGARLVRELFDLAKEKAPSIVFIDEIDAIGASRTEAMTSGDREVQRTL 277          
BLAST of CN184766 vs. ExPASy Swiss-Prot
Match: PRS8_MANSE (26S protease regulatory subunit 8 OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.774e-53
Identity = 106/245 (43.27%), Postives = 159/245 (64.90%), Query Frame = 3
Query:  102 KEIESRVRSVKENLRAAKKEFNKTE-------DDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 815
            +E++  V    +NLR  + + N+         ++L+ LQ  G  +GEV++P+D ++++VK     ++VV     VD   +T+  RV L   + T+ + LP +VDP+V  M+ E   + +Y  VGGL  QI+E++E IELP+ +PELF  +GI  PKGVLLYGPPGTGKTLLARA+A + +  F++V  S ++ K+IGE +R++RE+F  AR+H P IIFMDEID+IG  R   G+  D E+QRT+
Sbjct:   25 EELQLIVAEKSQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTM 269          
BLAST of CN184766 vs. ExPASy Swiss-Prot
Match: PSMR_AERPE (Proteasome-activating nucleotidase OS=Aeropyrum pernix GN=pan PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 3.026e-53
Identity = 107/236 (45.34%), Postives = 155/236 (65.68%), Query Frame = 3
Query:  108 IESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 815
            ++ +VRS+ +   + +KE    ++++  L S   I   VL  +D+ R++VK+S+GP  +V   + VD   L  G  V L+    TI+  LP   DP+V  M  E+   V +  VGGL +QIRE+ E++ LP+ NP LF  +GI PPKGVLL+GPPGTGKTLLA+A+A   +A F++VV S +++K+IGE ARL+RE+F  AR+  P I+F+DEIDAI  +R   GTS DRE+QRT+
Sbjct:   28 LKDKVRSLTKEKISLQKELEYYKNEITKLLSPPYIEAVVLEVIDDNRVVVKSSTGPNLIVNVAAGVDARSLKPGAIVALNNRGSTIVDVLPGRYDPLVKAMEVEERPKVFFKDVGGLEEQIREIYEAVVLPIKNPHLFRELGIDPPKGVLLHGPPGTGKTLLAKAVAGETEATFIRVVGSELVNKFIGEGARLVREIFRLAREKAPSILFIDEIDAIASKRVDIGTSGDREVQRTM 263          
The following BLAST results are available for this feature:
BLAST of CN184766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 373
Match NameE-valueIdentityDescription
PSMR_SULIA2.924e-5643.51Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PSMR_METPE4.988e-5644.76Proteasome-activating nucleotidase OS=Methanosphae... [more]
PSMR_METMP2.475e-5543.02Proteasome-activating nucleotidase OS=Methanococcu... [more]
PSMR_METM72.475e-5543.02Proteasome-activating nucleotidase OS=Methanococcu... [more]
PSMR_METM62.475e-5543.02Proteasome-activating nucleotidase OS=Methanococcu... [more]
PSMR_METM57.203e-5542.64Proteasome-activating nucleotidase OS=Methanococcu... [more]
PSMR_SULTO1.229e-5447.03Proteasome-activating nucleotidase OS=Sulfolobus t... [more]
PSMR_METHJ6.097e-5444.17Proteasome-activating nucleotidase OS=Methanospiri... [more]
PRS8_MANSE1.774e-5343.2726S protease regulatory subunit 8 OS=Manduca sexta... [more]
PSMR_AERPE3.026e-5345.34Proteasome-activating nucleotidase OS=Aeropyrum pe... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006B01_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184766 ID=CN184766; Name=CN184766; organism=Citrus sinensis; type=EST; length=817bp
GAGGTACATCAATATCTCCGACTGCAACGATGAGCGAAGGAGAAGACGCC
GTTAGACGCCGTAATGCCATGACGGAGTACCGTAAGAAGCTACTCCAGCA
CAAAGAAATCGAATCTAGAGTTCGATCTGTTAAGGAGAATTTGAGAGCTG
CAAAGAAGGAGTTCAACAAAACAGAAGATGATTTGAAGTCTCTTCAAAGT
GTTGGGCAGATCATTGGAGAAGTTCTCAGACCTCTTGACAATGAACGCTT
GATTGTTAAAGCTAGCAGCGGGCCCCGTTATGTGGTTGGATGCCGCAGCA
AAGTGGATAAAGAGAAGTTGACTTCGGGAACAAGAGTTGTTCTTGATATG
ACAACGCTCACAATCATGCGAGCTCTTCCTCGTGAAGTTGATCCGGTTGT
ATATAACATGTTGCATGAAGATCCGGGTAATGTTAGCTATTCGGCTGTGG
GTGGTTTATCTGATCAGATCAGAGAATTAAGGGAATCTATTGAGCTACCT
TTGATGAATCCTGAGCTTTTCCTTAGAGTTGGAATTAAACCTCCCAAGGG
CGTTCTTCTTTATGGGCCTCCTGGAACTGGCAAGACATTATTAGCACGAG
CAATTGCCAGTAACATAGATGCAAATTTTCTGAAGGTGGTTTCAAGTGCC
ATTATTGATAAGTACATTGGGGAAAGTGCAAGGTTGATAAGAGAGATGTT
TGGATATGCACGTGATCATCAACCCTGCATCATTTTTATGGATGAAATTG
ATGCCATCGGTGGACGCCGTTTTAGTGAAGGAACCAGTGCAGATCGTGAA
ATTCAAAGGACACTGAT
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