CN184766
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184766 vs. ExPASy Swiss-Prot
Match: PRS8_SCHPO (26S protease regulatory subunit 8 homolog OS=Schizosaccharomyces pombe GN=let1 PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.132e-50 Identity = 106/259 (40.93%), Postives = 161/259 (62.16%), Query Frame = 3 Query: 63 NAMTEYRKKLLQHKEIESRVRSVKENLRAAKKEFNKTE-------DDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRF-SEGTSADREIQRTL 815 N + Y +K+ ++ E + +NLR + + N ++++ LQ G +GEV++ + +++VK +YVV +D +++ RV L + +++ LP +VDP+V M+ E + +Y VGGL QI+E++E IELP+ +PELF +GI PKG+LLYGPPGTGKTLLARA+A + D F++V S ++ KYIGE +R++RE+F AR+H P IIFMDEID+IG R S G S D E+QRT+ Sbjct: 15 NIVQYYTQKI---QDAELAILQKTQNLRRLEAQRNGLNARVRLLREEIQLLQEPGSYVGEVIKTMGKNKVLVKVHPEGKYVVDISPDIDIKEIKPNIRVALRNDSYQLIKILPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSGDSEVQRTM 270
BLAST of CN184766 vs. ExPASy Swiss-Prot
Match: PRS6B_SOLTU (26S protease regulatory subunit 6B homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.190e-49 Identity = 105/268 (39.18%), Postives = 166/268 (61.94%), Query Frame = 3 Query: 15 SPTATMSEGEDAVRRRNAMTEYRKKLLQHKE-IESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 815 S T S+GED + R K L + E IE + VK+ L+ ++E + ++++K +QSV +IG+ + +D IV +++G Y V S +++E L V LD + ++ LP E D + + + +V+Y+ +GG Q +E+RE++ELPL + EL+ ++GI PP+GVLLYGPPGTGKT+LA+A+A + A F++VV S + KY+GE R++R++F A+++ P IIF+DE+DAI RF T ADRE+QR L Sbjct: 23 SITDVPSDGEDDLYAR------LKSLQRQLEFIEIQEEYVKDELKNLRREHLRAQEEVKRIQSVPLVIGQFMEMIDQNNAIVGSTTGSNYYVRILSTINRELLKPSASVGLDRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRIL 284
BLAST of CN184766 vs. ExPASy Swiss-Prot
Match: PRS6B_RAT (26S protease regulatory subunit 6B OS=Rattus norvegicus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.190e-49 Identity = 99/245 (40.41%), Postives = 156/245 (63.67%), Query Frame = 3 Query: 84 KKLLQHKE-IESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 815 KKL Q E +E + +K+ + KKEF ++++K +QS+ +IG+ L +D IV +++G Y V S +D+E L V L + ++ LP E D + + + +V Y+ +GG+ Q +E+RE++ELPL + EL+ ++GI PP+GVL+YGPPG GKT+LA+A+A + A F++VV S + KY+GE R++R++F A+++ P IIF+DEIDAI +RF T ADRE+QR L Sbjct: 45 KKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRIL 289
BLAST of CN184766 vs. ExPASy Swiss-Prot
Match: PRS6B_MACFA (26S protease regulatory subunit 6B OS=Macaca fascicularis GN=PSMC4 PE=2 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.190e-49 Identity = 99/245 (40.41%), Postives = 156/245 (63.67%), Query Frame = 3 Query: 84 KKLLQHKE-IESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 815 KKL Q E +E + +K+ + KKEF ++++K +QS+ +IG+ L +D IV +++G Y V S +D+E L V L + ++ LP E D + + + +V Y+ +GG+ Q +E+RE++ELPL + EL+ ++GI PP+GVL+YGPPG GKT+LA+A+A + A F++VV S + KY+GE R++R++F A+++ P IIF+DEIDAI +RF T ADRE+QR L Sbjct: 45 KKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRIL 289
BLAST of CN184766 vs. ExPASy Swiss-Prot
Match: PRS6B_HUMAN (26S protease regulatory subunit 6B OS=Homo sapiens GN=PSMC4 PE=1 SV=2) HSP 1 Score: 196.823 bits (499), Expect = 1.190e-49 Identity = 99/245 (40.41%), Postives = 156/245 (63.67%), Query Frame = 3 Query: 84 KKLLQHKE-IESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 815 KKL Q E +E + +K+ + KKEF ++++K +QS+ +IG+ L +D IV +++G Y V S +D+E L V L + ++ LP E D + + + +V Y+ +GG+ Q +E+RE++ELPL + EL+ ++GI PP+GVL+YGPPG GKT+LA+A+A + A F++VV S + KY+GE R++R++F A+++ P IIF+DEIDAI +RF T ADRE+QR L Sbjct: 45 KKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRIL 289
BLAST of CN184766 vs. ExPASy Swiss-Prot
Match: PRS6B_BOVIN (26S protease regulatory subunit 6B OS=Bos taurus GN=PSMC4 PE=2 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.190e-49 Identity = 99/245 (40.41%), Postives = 156/245 (63.67%), Query Frame = 3 Query: 84 KKLLQHKE-IESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 815 KKL Q E +E + +K+ + KKEF ++++K +QS+ +IG+ L +D IV +++G Y V S +D+E L V L + ++ LP E D + + + +V Y+ +GG+ Q +E+RE++ELPL + EL+ ++GI PP+GVL+YGPPG GKT+LA+A+A + A F++VV S + KY+GE R++R++F A+++ P IIF+DEIDAI +RF T ADRE+QR L Sbjct: 45 KKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRIL 289
BLAST of CN184766 vs. ExPASy Swiss-Prot
Match: PRS4_ORYSJ (26S protease regulatory subunit 4 homolog OS=Oryza sativa subsp. japonica GN=TBP2 PE=2 SV=2) HSP 1 Score: 196.823 bits (499), Expect = 1.190e-49 Identity = 98/236 (41.53%), Postives = 151/236 (63.98%), Query Frame = 3 Query: 108 IESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 815 +E + +E LR + + + + L+ +G + +D IV +S GP Y VG S VDK++L G +++ L+++ L EVDP+V M E SY+ +GGL QI+E++E++ELPL +PEL+ +GI+PPKGV+LYG PGTGKTLLA+A+A++ A FL+VV S +I KY+G+ +L+RE+F A + P I+F+DEIDA+G +R+ + +REIQRT+ Sbjct: 82 MEEEFVAAQERLRPTEDKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADELSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTM 317
BLAST of CN184766 vs. ExPASy Swiss-Prot
Match: PRS6B_CAEEL (Probable 26S protease regulatory subunit 6B OS=Caenorhabditis elegans GN=rpt-3 PE=2 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.554e-49 Identity = 99/249 (39.76%), Postives = 159/249 (63.86%), Query Frame = 3 Query: 69 MTEYRKKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 815 +T ++L + +E ++ NL +KE ++++K +QSV +IG+ L +D IV +++G Y V S +D+E L G V L + ++ LP E D + + ++ ++SY +GGL Q +E+RE++ELPL + EL+ ++GI PP+GVL+YGPPG GKT+LA+A+A+N A+F++VV S + KY+GE R++R++F A+++ P IIF+DEIDAI +RF T ADRE+QR L Sbjct: 40 LTTLERQLAHLQVMEDYIKLETRNL---EKELLHAQEEVKRIQSVPLVIGQFLEAVDQNHAIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTGADREVQRIL 285
BLAST of CN184766 vs. ExPASy Swiss-Prot
Match: PRS4_DROME (26S protease regulatory subunit 4 OS=Drosophila melanogaster GN=Pros26.4 PE=1 SV=2) HSP 1 Score: 196.438 bits (498), Expect = 1.554e-49 Identity = 107/279 (38.35%), Postives = 166/279 (59.50%), Query Frame = 3 Query: 6 TSISPTATMSEGEDAVRRRNAMTEY---RKKLLQHKEIESRVRSVKENLR---AAKKEFNKTEDD---LKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 815 T + ++G DA + +T + R KLL+ + I+ + E +R K + K E++ + L+ +G + +D+ IV S G + V S VDK++L G V+L+ ++ L + DP+V M E +Y+ +GGL QI+E++ES+ELPL +PE + +GIKPPKGV+LYGPPGTGKTLLA+A+A+ A FL+VV S +I KY+G+ +L+RE+F A +H P I+F+DEIDA+G +R+ + +REIQRT+ Sbjct: 30 TRVGKKKRRAKGPDAAMKLPQVTPHTRCRLKLLKLERIKDYLMMEDEFIRNQERLKPQDEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTM 308
BLAST of CN184766 vs. ExPASy Swiss-Prot
Match: PRS4_YEAST (26S protease regulatory subunit 4 homolog OS=Saccharomyces cerevisiae GN=RPT2 PE=1 SV=3) HSP 1 Score: 196.052 bits (497), Expect = 2.030e-49 Identity = 102/244 (41.80%), Postives = 155/244 (63.52%), Query Frame = 3 Query: 84 KKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 815 +++ H +E S E L+ +K+ + + L+ ++ IG + +D++ IV + + P Y V S VDKE L G V+L T++I+ L + DP+V M + SYS +GGL QI+E++ES+ELPL +PEL+ +GIKPPKGV+LYG PGTGKTLLA+A+A+ A FL++V S +I KY+G+ RL R++F A ++ P I+F+DEIDAIG +R+ + +REIQRT+ Sbjct: 63 ERIKDHLLLEEEFVSNSEILKPFEKKQEEEKKQLEEIRGNPLSIGTLEEIIDDDHAIVTSPTMPDYYVSILSFVDKELLEPGCSVLLHHKTMSIVGVLQDDADPMVSVMKMDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTM 306 The following BLAST results are available for this feature:
BLAST of CN184766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 373
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN184766 ID=CN184766; Name=CN184766; organism=Citrus sinensis; type=EST; length=817bpback to top |