CN184766
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184766 vs. ExPASy Swiss-Prot
Match: PRS4_SCHPO (26S protease regulatory subunit 4 homolog OS=Schizosaccharomyces pombe GN=mts2 PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 7.713e-49 Identity = 102/254 (40.16%), Postives = 161/254 (63.39%), Query Frame = 3 Query: 72 TEYRKKLLQHKEIESRVRSVKE---NLRAAKKEFNKTEDD---LKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 815 T R +LL+ + I + +E N K + +T+++ + ++ +G + +D++ IV +++GP Y V S VDK+ L G V+L ++I+ L + DP++ M + SY+ +GGL QI+E++E++ELPL +PEL+ +GIKPPKGV+LYG PGTGKTLLA+A+A+ A FL+VV S +I KY+G+ RL+R++F A +H P I+F+DEIDAIG +R+ + A+REIQRT+ Sbjct: 63 TRCRLRLLKMQRIHDHLLMEEEYVQNQERLKPQDERTQEERNRVDEIRGTPMSVGTLEEIIDDDHAIV-STAGPEYYVSIMSFVDKDMLEPGCSVLLHHKAMSIVGLLLDDTDPMINVMKLDKAPTESYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDAQSGAEREIQRTM 315
BLAST of CN184766 vs. ExPASy Swiss-Prot
Match: PRS4_CHICK (26S protease regulatory subunit 4 OS=Gallus gallus GN=PSMC1 PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 7.713e-49 Identity = 107/279 (38.35%), Postives = 168/279 (60.22%), Query Frame = 3 Query: 6 TSISPTATMSEGEDAVRRRNAMTEY---RKKLLQHKEIESRVRSVKENLRAAK--KEFNKTEDDLKS----LQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 815 T + ++G DA + +T + R KLL+ + I+ + +E +R + K + +++ +S L+ +G + +D+ IV S G + V S VDK+ L G V+L+ ++ L + DP+V M E +Y+ +GGL +QI+E++ES+ELPL +PE + +GIKPPKGV+LYGPPGTGKTLLA+A+A+ A FL+VV S +I KY+G+ +L+RE+F A +H P I+F+DEIDAIG +R+ + +REIQRT+ Sbjct: 31 TRVGKKKKKTKGPDAASKPPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKLEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDSNSGGEREIQRTM 309
BLAST of CN184766 vs. ExPASy Swiss-Prot
Match: PRS6B_YEAST (26S protease regulatory subunit 6B homolog OS=Saccharomyces cerevisiae GN=RPT3 PE=1 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.316e-48 Identity = 94/229 (41.05%), Postives = 151/229 (65.94%), Query Frame = 3 Query: 129 VKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 815 +K+ R K+E + ++++K +QSV +IG+ L P+D IV +++G YVV S +D+E L V L + ++ LP + D + M + +V+Y+ VGGL Q +E+RE++ELPL+ +L+ ++GI PP+GVLLYGPPGTGKT+L +A+A++ A F++V S + KY+GE R++R++F AR++ P IIF+DE+D+I +RF T +DRE+QR L Sbjct: 68 IKDEQRHLKRELKRAQEEVKRIQSVPLVIGQFLEPIDQNTGIVSSTTGMSYVVRILSTLDRELLKPSMSVALHRHSNALVDILPPDSDSSISVMGENEKPDVTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQTGSDREVQRIL 296
BLAST of CN184766 vs. ExPASy Swiss-Prot
Match: PRS4_DICDI (26S protease regulatory subunit 4 homolog OS=Dictyostelium discoideum GN=psmC1 PE=1 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.316e-48 Identity = 97/214 (45.33%), Postives = 143/214 (66.82%), Query Frame = 3 Query: 174 EDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 815 E ++ L+ +G + +D+ IV ++ GP + V S VDK KL G V+L+ TL+++ + EVDP+V M E SYS +GGL Q++E++E+IELPL +PEL+ +GIKPPKGV+LYG PGTGKTLLA+A+A+ A FL+VV S +I KY+G+ +L+RE+F A + P I+F+DEIDA+G +R+ + +REIQRT+ Sbjct: 95 EKIIEELRGDPLTVGNLEEIIDDNHAIVSSTVGPEHYVRIMSFVDKSKLYLGATVLLNNKTLSVVGVIDGEVDPMVNVMKVEKAPTESYSDIGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPSIVFIDEIDAVGTKRYDSQSGGEREIQRTM 308
BLAST of CN184766 vs. ExPASy Swiss-Prot
Match: PRS7_PONAB (26S protease regulatory subunit 7 OS=Pongo abelii GN=PSMC2 PE=2 SV=3) HSP 1 Score: 191.43 bits (485), Expect = 5.000e-48 Identity = 103/279 (36.92%), Postives = 161/279 (57.71%), Query Frame = 3 Query: 18 PTATMSEGEDAVRRRNAMTEYRKKLLQ-HKEIESRVRSVKENLRAAKKEFNKTED-------DLKSLQS-----VGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 815 P + EG+ A+ + + Y +++ Q +I+ ++ + E + + D ++LQS V + + ++ + I+ ++VV +V + G RV +D I LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGVLL+GPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + C+IF DEIDAIGG RF +G D E+QRT+ Sbjct: 21 PIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIITADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTM 299
BLAST of CN184766 vs. ExPASy Swiss-Prot
Match: PRS7_XENLA (26S protease regulatory subunit 7 OS=Xenopus laevis GN=psmc2 PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 6.530e-48 Identity = 103/279 (36.92%), Postives = 162/279 (58.06%), Query Frame = 3 Query: 18 PTATMSEGEDAVRRRNAMTEYRKKLLQ-HKEIESRVRSVKENLRAAKKEFNKTED-------DLKSLQS-----VGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 815 P ++ EG+ A+ + + Y +++ Q +I+ ++ + E + + D ++LQS V + + ++ + I+ ++VV +V + G RV +D I LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGVLL+GPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + C+IF DEIDAIGG RF +G D E+QRT+ Sbjct: 21 PIRSLDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTM 299
BLAST of CN184766 vs. ExPASy Swiss-Prot
Match: PRS7_CAEEL (26S protease regulatory subunit 7 OS=Caenorhabditis elegans GN=rpt-1 PE=1 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 6.530e-48 Identity = 108/279 (38.71%), Postives = 158/279 (56.63%), Query Frame = 3 Query: 30 MSEGEDAVRRRNAMTEYRKKLLQ-HKEIESRVRSVKENLR----------------AAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 815 + EG+ AV +R Y ++L +IE+ ++ V E AA K+ + E L+ + I + P R ++ ++VV V + G RV +D I LP ++DP V M E+ +V+YS VGG DQI +LRE +E PL++PE ++ +GI+PPKGVLLYGPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + C+IF DEIDA+GG RF +G D E+QRT+ Sbjct: 27 LDEGDIAVLKRYGQGPYAEQLKTLDADIENCLKKVNELSGVKESDTGLAPPALWDIAADKQAMQQEQPLQVARCTKIITSDKHDP----RYLINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQRTM 301
BLAST of CN184766 vs. ExPASy Swiss-Prot
Match: PRS6B_DICDI (26S protease regulatory subunit 6B homolog OS=Dictyostelium discoideum GN=psmC4 PE=1 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 6.530e-48 Identity = 103/267 (38.58%), Postives = 165/267 (61.80%), Query Frame = 3 Query: 21 TATMSEGEDAVRRRNAMTEYRKKLLQHKEIESRVRS--VKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 815 TA ++ ++A R A + K L+ K ++ +K + K+E ++++K ++SV +IG++L +D+ IV+++SG V S +D+E L V L + ++ LP E D ++ + ++ + SYS +GG Q +E+RE++ELPL + L+ ++GI PP+GVLLYGPPGTGKT+LA+A+A + A F++VV S + KY+GE RL+R++F AR++ P IIF+DEIDAI +RF T ADRE+QR L Sbjct: 8 TAKVTVTKEASHHREADLYQKMKSLESKLDFFNIQEEYIKYEYKNLKRELLHAQEEVKRIRSVPLLIGQLLEMVDSNTGIVQSTSGSTLCVRILSTIDRELLKPSASVALQRHSNALVDTLPPESDSSIHLLGADEKPSESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGADREVQRIL 274
BLAST of CN184766 vs. ExPASy Swiss-Prot
Match: PRS6B_ARATH (26S protease regulatory subunit 6B homolog OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 6.530e-48 Identity = 93/229 (40.61%), Postives = 149/229 (65.07%), Query Frame = 3 Query: 129 VKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 815 VK+ + K+E + ++++K +QSV +IG+ + +D IV +++G Y V S +++E L V L + ++ LP E D + + + +VSY+ +GG Q +E+RE++ELPL + EL+ ++GI PP+GVLLYGPPGTGKT+LA+A+A++ A F++VV S + KY+GE R++R++F A+++ P IIF+DE+DAI RF T ADRE+QR L Sbjct: 51 VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRIL 279
BLAST of CN184766 vs. ExPASy Swiss-Prot
Match: PRS7_MOUSE (26S protease regulatory subunit 7 OS=Mus musculus GN=Psmc2 PE=1 SV=5) HSP 1 Score: 190.66 bits (483), Expect = 8.528e-48 Identity = 103/279 (36.92%), Postives = 161/279 (57.71%), Query Frame = 3 Query: 18 PTATMSEGEDAVRRRNAMTEYRKKLLQ-HKEIESRVRSVKENLRAAKKEFNKTED-------DLKSLQS-----VGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 815 P + EG+ A+ + + Y +++ Q +I+ ++ + E + + D ++LQS V + + ++ + I+ ++VV +V + G RV +D I LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGVLL+GPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + C+IF DEIDAIGG RF +G D E+QRT+ Sbjct: 21 PIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTM 299 The following BLAST results are available for this feature:
BLAST of CN184766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 373
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN184766 ID=CN184766; Name=CN184766; organism=Citrus sinensis; type=EST; length=817bpback to top |