CN184757

Overview
NameCN184757
Unique NameCN184757
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length807
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184757 vs. ExPASy Swiss-Prot
Match: CH601_SYNJA (60 kDa chaperonin 1 OS=Synechococcus sp. (strain JA-3-3Ab) GN=groL1 PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 6.826e-58
Identity = 112/202 (55.45%), Postives = 155/202 (76.73%), Query Frame = 2
Query:  203 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQF 805
            AK I F + +R A++ GI++L+DAV +T+GP+GRNV+L++ FG+P++VNDGVTIA+ IELADP+EN GA L+REVA+KTND AGDGTTTA++LA+ +++ GL ++++GANPV+L+RGI+KT   LVE++  +A+P+EGR +I  VATISAGND  +G MIA A+D VG DGV+                GM+ DRGYISP F
Sbjct:    2 AKQILFREEARKALEQGINQLADAVKVTIGPKGRNVLLEKKFGAPQIVNDGVTIAKEIELADPLENTGAQLMREVATKTNDVAGDGTTTATILAQSMVQEGLKNISAGANPVALRRGIEKTTAYLVEQIAAQAKPVEGRKNIAEVATISAGNDPEVGEMIARAMDAVGRDGVITVEESKSLETQLEVVEGMQFDRGYISPYF 203          
BLAST of CN184757 vs. ExPASy Swiss-Prot
Match: CH602_ANASL (60 kDa chaperonin 2 OS=Anabaena sp. (strain L31) GN=groL2 PE=1 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.594e-57
Identity = 114/202 (56.44%), Postives = 151/202 (74.75%), Query Frame = 2
Query:  203 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQF 805
            AK I+FD+ SR A++ G++ L+DAV +TLGP+GRNV+L++ +G+P++VNDG+T+A+ IEL DP+EN GA LI+EVASKT D AGDGTTTA+VL + +IK GL +V +G NPVSLKRGIDKT   LVEE+ K A+P+EG   I  VAT+SAGND+ +G MIA+A+++V  DGV+                GM IDRGYISP F
Sbjct:    2 AKIISFDEESRRALERGVNALADAVKITLGPKGRNVLLEKKYGTPQIVNDGITVAKEIELEDPLENTGARLIQEVASKTKDVAGDGTTTATVLVQALIKEGLKNVAAGINPVSLKRGIDKTTEALVEEIAKVAKPVEG-SAIAQVATVSAGNDEEVGGMIAEAVERVTKDGVITVEESKSLTTELDVVEGMHIDRGYISPYF 202          
BLAST of CN184757 vs. ExPASy Swiss-Prot
Match: CH602_ANAVT (60 kDa chaperonin 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=groL2 PE=3 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 4.425e-57
Identity = 113/202 (55.94%), Postives = 151/202 (74.75%), Query Frame = 2
Query:  203 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQF 805
            AK I+FD+ SR A++ G++ L+DAV +TLGP+GRNV+L++ +G+P++VNDG+T+A+ IEL DP+EN GA LI+EVA+KT D AGDGTTTA+VL + +IK GL +V +G+NPVSLKRGIDKT   LV E+ K A+P+EG   I  VAT+SAGND+ +G MIA A++KV  DGV+                GM+IDRGYISP F
Sbjct:    2 AKIISFDEESRRALERGVNALADAVKITLGPKGRNVLLEKKYGTPQIVNDGITVAKEIELEDPLENTGARLIQEVAAKTKDVAGDGTTTATVLVQALIKEGLKNVAAGSNPVSLKRGIDKTTEALVAEIAKVAKPVEG-SAIAQVATVSAGNDEEVGAMIAQAVEKVTKDGVITVEESKSLTTELDVVEGMQIDRGYISPYF 202          
BLAST of CN184757 vs. ExPASy Swiss-Prot
Match: CH602_ANASP (60 kDa chaperonin 2 OS=Anabaena sp. (strain PCC 7120) GN=groL2 PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.287e-56
Identity = 112/202 (55.45%), Postives = 150/202 (74.26%), Query Frame = 2
Query:  203 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQF 805
            AK I+FD+ SR A++ G++ L+DAV +TLGP+GRNV+L++ +G+P++VNDG+T+A+ IEL DP+EN GA LI+EVASKT D AGDGTTTA+VL + +I+ GL +V +G NPVSLKRGIDKT   LV E+ K A+P+EG   I  VAT+S+GND+ +G MIA A++KV  DGV+                GM+IDRGYISP F
Sbjct:    2 AKIISFDEESRRALERGVNALADAVKITLGPKGRNVLLEKKYGTPQIVNDGITVAKEIELEDPLENTGARLIQEVASKTKDVAGDGTTTATVLVQALIREGLKNVAAGTNPVSLKRGIDKTTEALVAEIAKVAKPVEG-SAIAQVATVSSGNDEEVGAMIAQAVEKVTKDGVITVEESKSLTTELEVVEGMQIDRGYISPYF 202          
BLAST of CN184757 vs. ExPASy Swiss-Prot
Match: CH60_DESAP (60 kDa chaperonin OS=Desulforudis audaxviator (strain MP104C) GN=groL PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.681e-56
Identity = 114/201 (56.72%), Postives = 150/201 (74.63%), Query Frame = 2
Query:  200 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISP 799
            +AKDI + + +R AM+ G++ L+DAV +TLGP+GRNVVL++ FGSP +VNDGVTIAR IEL +P EN GA L++EVA+KTND AGDGTTTA+VLA+ I++ GL +VT+GANP+ LKRGI+K V   VEE++ RA+P+E ++ I  VA+ISA ND  IG +IADA++KVG DGV+                GM  DRGYISP
Sbjct:    2 AAKDIVYREDARTAMERGVNALADAVRVTLGPKGRNVVLEKKFGSPMIVNDGVTIAREIELENPFENMGAQLVKEVATKTNDIAGDGTTTAAVLAQAIVRAGLKNVTAGANPMILKRGIEKAVERTVEEIKSRAKPVESKEAITQVASISA-NDTTIGNLIADAMEKVGKDGVITVEESKGMGTSLEVVDGMNFDRGYISP 201          
BLAST of CN184757 vs. ExPASy Swiss-Prot
Match: CH601_GLOVI (60 kDa chaperonin 1 OS=Gloeobacter violaceus GN=groL1 PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.196e-56
Identity = 111/200 (55.50%), Postives = 149/200 (74.50%), Query Frame = 2
Query:  203 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISP 799
            AK + FD+ +R A++ GID L++AV +TLGP+GRNVVL++ FG+P+++NDGVTIA+ IEL + +EN GA LI+EVASKTND AGDGTTTA VLA+ ++K GL +V +G+NP++LKRG++KTV  LV ELEK A+P+EG   I  VA +SAGNDD IG MIA A++ VG +GV+                GM+ DRGY+SP
Sbjct:    2 AKQVVFDETARRALERGIDALANAVRVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIELENKLENTGAQLIKEVASKTNDVAGDGTTTACVLAQSLVKEGLKNVAAGSNPMNLKRGMEKTVRHLVAELEKVAKPVEGSQAIAQVAAVSAGNDDEIGEMIARAMETVGKEGVITVEESKSLTTELEVTEGMQFDRGYVSP 201          
BLAST of CN184757 vs. ExPASy Swiss-Prot
Match: CH60_LEPIN (60 kDa chaperonin OS=Leptospira interrogans GN=groL PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.746e-56
Identity = 110/200 (55.00%), Postives = 148/200 (74.00%), Query Frame = 2
Query:  203 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISP 799
            AKDI +++ +R  +  G++KL++AV +TLGP+GRNVV+D+ FG+P +  DGVT+A+ IEL DP+EN GA +++EV++KTND AGDGTTTA++LA+ II  GL +VT+GANP+SLKRGIDK V   VE ++KRA  IE + DI  VA+ISA ND+ IG +IADA+DKVG DGV+                GM+ DRGYISP
Sbjct:    2 AKDIEYNETARRKLLEGVNKLANAVKVTLGPKGRNVVIDKKFGAPTITKDGVTVAKEIELEDPLENMGAQMVKEVSTKTNDVAGDGTTTATILAQSIINEGLKNVTAGANPMSLKRGIDKAVTAAVESIQKRAVKIENKKDIANVASISANNDNTIGNLIADAMDKVGKDGVITVEEAKSIETTLDVVEGMQFDRGYISP 201          
BLAST of CN184757 vs. ExPASy Swiss-Prot
Match: CH602_MOOTA (60 kDa chaperonin 2 OS=Moorella thermoacetica (strain ATCC 39073) GN=groL2 PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 4.892e-56
Identity = 111/200 (55.50%), Postives = 148/200 (74.00%), Query Frame = 2
Query:  203 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISP 799
            AK + FD+ +R A++ GI KL++AV +TLGPRGRNVVL++ FG+P + NDGVTIA+ +EL DP+EN GA L+REVASKTND AGDGTTTA VLA+ I++ G+ +V +GANP+ +KRGI+K V  +VE L+ +ARP+E +D I  VA+ISA ND  IG ++ADA++KVG DGV+                GM+ DRGYISP
Sbjct:    2 AKQVVFDREAREALEKGITKLTEAVRVTLGPRGRNVVLEKKFGAPTITNDGVTIAKEVELEDPLENVGALLVREVASKTNDVAGDGTTTACVLAQAIVREGMKNVAAGANPMFMKRGIEKAVAAVVENLKAQARPVETKDSISQVASISA-NDPQIGALVADAMEKVGKDGVITVEESKGMETAVDVVEGMQFDRGYISP 200          
BLAST of CN184757 vs. ExPASy Swiss-Prot
Match: CH60_LEPIC (60 kDa chaperonin OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=groL PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 8.345e-56
Identity = 109/200 (54.50%), Postives = 148/200 (74.00%), Query Frame = 2
Query:  203 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISP 799
            AKDI +++ +R  +  G++KL++AV +TLGP+GRNVV+D+ FG+P +  DGVT+A+ IEL DP+EN GA +++EV++KTND AGDGTTTA++LA+ II  GL +VT+GANP+SLK+GIDK V   VE ++KRA  IE + DI  VA+ISA ND+ IG +IADA+DKVG DGV+                GM+ DRGYISP
Sbjct:    2 AKDIEYNETARRKLLEGVNKLANAVKVTLGPKGRNVVIDKKFGAPTITKDGVTVAKEIELEDPLENMGAQMVKEVSTKTNDVAGDGTTTATILAQSIINEGLKNVTAGANPMSLKKGIDKAVTAAVESIQKRAVKIENKKDIANVASISANNDNTIGNLIADAMDKVGKDGVITVEEAKSIETTLDVVEGMQFDRGYISP 201          
BLAST of CN184757 vs. ExPASy Swiss-Prot
Match: CH60_THEEB (60 kDa chaperonin OS=Thermosynechococcus elongatus (strain BP-1) GN=groL PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.090e-55
Identity = 110/202 (54.46%), Postives = 148/202 (73.27%), Query Frame = 2
Query:  203 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQF 805
            AK I +++ +R A++ G+D L+++V +TLGP+GRNVVL++ FG+P++VNDGVTIA+ IEL D +EN G ALIR+ ASKTND+AGDGTTTA+VLA  ++K GL +V +GANP++LKRGIDK    LVE++ + ARP+E    I  VA ISAGND+ +G MIADA+DKVG +GV+                GM  D+GYISP F
Sbjct:    2 AKRIIYNENARRALEKGMDILAESVAVTLGPKGRNVVLEKKFGAPQIVNDGVTIAKEIELEDHIENTGVALIRQAASKTNDAAGDGTTTATVLAHAMVKEGLRNVAAGANPIALKRGIDKATQFLVEKIAEHARPVEDSKAIAQVAAISAGNDEEVGRMIADAMDKVGKEGVISLEEGKSMTTELEVTEGMRFDKGYISPYF 203          
The following BLAST results are available for this feature:
BLAST of CN184757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH601_SYNJA6.826e-5855.4560 kDa chaperonin 1 OS=Synechococcus sp. (strain J... [more]
CH602_ANASL2.594e-5756.4460 kDa chaperonin 2 OS=Anabaena sp. (strain L31) G... [more]
CH602_ANAVT4.425e-5755.9460 kDa chaperonin 2 OS=Anabaena variabilis (strain... [more]
CH602_ANASP1.287e-5655.4560 kDa chaperonin 2 OS=Anabaena sp. (strain PCC 71... [more]
CH60_DESAP1.681e-5656.7260 kDa chaperonin OS=Desulforudis audaxviator (str... [more]
CH601_GLOVI2.196e-5655.5060 kDa chaperonin 1 OS=Gloeobacter violaceus GN=gr... [more]
CH60_LEPIN3.746e-5655.0060 kDa chaperonin OS=Leptospira interrogans GN=gro... [more]
CH602_MOOTA4.892e-5655.5060 kDa chaperonin 2 OS=Moorella thermoacetica (str... [more]
CH60_LEPIC8.345e-5654.5060 kDa chaperonin OS=Leptospira interrogans serogr... [more]
CH60_THEEB1.090e-5554.4660 kDa chaperonin OS=Thermosynechococcus elongatus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006A19_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006A19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184757 ID=CN184757; Name=CN184757; organism=Citrus sinensis; type=EST; length=807bp
GAGGCTTGTTGGTACCTTATCCGAAACAATTTCCCTCAGCAGACCCTTTA
CTCCGTTTGGTTGATTGTTCGAAATGGCTTCTGCTAACGCCCTTTCTTCG
GCTTCCATTCTTTGCTCTCCCAAACAGGGGAGCTTGAGGAGGAGAGGAAA
TCAGAATCAGGGTCAGAGAGTAAATTACAGGAGATTCGCTGTTAGAGCGT
CTGCCAAAGATATTGCTTTTGACCAGAGGTCCAGGGCCGCAATGCAGGCC
GGCATCGATAAGCTTTCCGATGCTGTTGGCCTTACTCTTGGTCCAAGAGG
GAGAAATGTTGTTCTGGATGAATTTGGGAGTCCGAAAGTGGTTAATGATG
GAGTAACAATAGCCCGAGCTATTGAGCTCGCAGATCCCATGGAAAATGCT
GGTGCTGCTCTTATTAGGGAGGTTGCAAGCAAAACCAATGACTCTGCTGG
TGATGGAACAACAACTGCATCAGTTCTTGCACGAGAAATAATTAAACTAG
GACTCCTGAGTGTCACGTCTGGTGCAAATCCTGTCTCCTTGAAGAGAGGG
ATTGATAAAACTGTACATGGGTTGGTAGAAGAGTTGGAGAAGAGGGCCAG
GCCTATCGAAGGTCGTGATGATATCAAAGCTGTTGCTACCATCTCTGCTG
GGAATGATGACCTGATTGGGACAATGATCGCCGATGCAATTGACAAGGTT
GGTCCTGATGGCGTCTTGTCAATCGAGTCATCATCATCATTTGAGACTAC
TGTTGAAGTTGAGGAAGGAATGGAGATTGACAGGGGTTACATCTCTCCTC
AGTTTGT
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