CN184750

Overview
NameCN184750
Unique NameCN184750
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7925 contig Csv1_Contig7925:60..818. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184750 vs. ExPASy Swiss-Prot
Match: PERP7_BRARA (Peroxidase P7 OS=Brassica rapa PE=1 SV=3)

HSP 1 Score: 238.424 bits (607), Expect = 3.191e-62
Identity = 122/238 (51.26%), Postives = 167/238 (70.17%), Query Frame = 1
Query:   52 QLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGG--VLANFDVTTPDVFDNKYFSN 759
            QL+ +FYS++CPN+L+T++  +K A SS  R+GAS++RL FHDCFV+GCD SILLD T++   E+ A PN NSARGF VI+++K+AVE+ACP VVSCADIL IAA  SV   GGP+W V +GRRD++TA++A AN N+P P  +L +L SSF  VGL+ + D+VALSGAHT G+++C  FR R+Y+  N       ++A F    ++ CP+    G   LA  D+ +   FDN YF N
Sbjct:    1 QLTTNFYSTSCPNLLSTVKSGVKSAVSSQPRMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAGPNRNSARGFTVINDIKSAVEKACPGVVSCADILAIAARDSVVQLGGPNWNVKVGRRDAKTASQAAANSNIPAPSMSLSQLISSFSAVGLSTR-DMVALSGAHTIGQSRCVNFRARVYNETN-------INAAFATLRQRSCPRAAGSGDANLAPLDINSATSFDNSYFKN 230          
BLAST of CN184750 vs. ExPASy Swiss-Prot
Match: PER4_VITVI (Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 4.168e-62
Identity = 125/249 (50.20%), Postives = 164/249 (65.86%), Query Frame = 1
Query:   19 LXVLEGSPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGG--VLANFDVTTPDVFDNKYFSN 759
            L +  GS S AQLS +FYS TCP V +T++  ++ A S + R+GASL+RL FHDCFV+GCDAS+LLD T++   E+ A PN NS RG  VIDN+K+ VE  CP VVSCADI+ IAA  SV + GGP W V LGRRDS+TA+ + AN N+P P  +L  L S F+  GL+ + D+VALSGAHT G+A+C  FR R+Y+  N       +D++F +  +  CP     G   LA  D+ TP  FDN Y+ N
Sbjct:   16 LALFAGS-SSAQLSTNFYSKTCPKVFDTVKSGVQSAVSKERRMGASLLRLFFHDCFVNGCDASVLLDDTSSFTGEQTAVPNKNSIRGLNVIDNIKSQVESVCPGVVSCADIIAIAARDSVVILGGPDWDVKLGRRDSKTASLSGANNNIPPPTSSLSNLISKFQAQGLSTR-DMVALSGAHTIGQARCTSFRARIYNETN-------IDSSFAKTRQASCPSASGSGDNNLAPLDLQTPTTFDNYYYKN 255          
BLAST of CN184750 vs. ExPASy Swiss-Prot
Match: PER36_ARATH (Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2)

HSP 1 Score: 237.269 bits (604), Expect = 7.109e-62
Identity = 116/243 (47.74%), Postives = 158/243 (65.02%), Query Frame = 1
Query:   31 EGSPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSN 759
            + + S A LSP FY ++CPN    ++  +  A+ +D R+ AS++RLHFHDCFV+GCDAS+LLDS+ T++SEK +  N +SARGFEVID +K+A+E  CP  VSCAD+L + A  S+ + GGPSW V LGRRD+R A+   + +N+P P  TL  + + F   GL D  DLVAL G+HT G ++C  FR RLY+      PD TL+  +   L++ CP  GN   L N D  TP  FDN Y+ N
Sbjct:   33 QSTSSVASLSPQFYENSCPNAQAIVQSYVANAYFNDPRMAASILRLHFHDCFVNGCDASVLLDSSGTMESEKRSNANRDSARGFEVIDEIKSALENECPETVSCADLLALVARDSIVICGGPSWEVYLGRRDAREASLIGSMENIPSPESTLQTILTMFNFQGL-DLTDLVALLGSHTIGNSRCIGFRQRLYNHTGNNDPDQTLNQDYASMLQQGCPISGNDQNLFNLDYVTPTKFDNYYYKN 274          
BLAST of CN184750 vs. ExPASy Swiss-Prot
Match: PER2_ORYSJ (Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PRX112 PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.608e-61
Identity = 125/243 (51.44%), Postives = 158/243 (65.02%), Query Frame = 1
Query:   37 SPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQ--GGNGGVLANFDVTTPDVFDNKYFSN 759
            S + AQLS +FY ++CPN L+TI+  +  A +S+ R+GASL+RLHFHDCFV GCDAS+LL        E+ A PN  S RGF V+DN+K  VE  C + VSCADIL +AA  SV   GGPSW V LGRRDS TAN + AN +LP P  +L EL  +F   GL D  D+VALSGAHT G+AQCQ FR RLY+  N       +D++F   L+  CP+  G     LA  D TTP+ FD+ Y++N
Sbjct:   19 SAASAQLSATFYDTSCPNALSTIKSAVTAAVNSEPRMGASLVRLHFHDCFVQGCDASVLLSG-----QEQNAGPNAGSLRGFNVVDNIKTQVEAICSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGL-DVTDMVALSGAHTIGQAQCQNFRDRLYNETN-------IDSSFATALKANCPRPTGSGDSNLAPLDTTTPNAFDSAYYTN 248          
BLAST of CN184750 vs. ExPASy Swiss-Prot
Match: PER2_ORYSI (Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX112 PE=3 SV=2)

HSP 1 Score: 234.572 bits (597), Expect = 4.608e-61
Identity = 125/243 (51.44%), Postives = 158/243 (65.02%), Query Frame = 1
Query:   37 SPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQ--GGNGGVLANFDVTTPDVFDNKYFSN 759
            S + AQLS +FY ++CPN L+TI+  +  A +S+ R+GASL+RLHFHDCFV GCDAS+LL        E+ A PN  S RGF V+DN+K  VE  C + VSCADIL +AA  SV   GGPSW V LGRRDS TAN + AN +LP P  +L EL  +F   GL D  D+VALSGAHT G+AQCQ FR RLY+  N       +D++F   L+  CP+  G     LA  D TTP+ FD+ Y++N
Sbjct:   19 SAASAQLSATFYDTSCPNALSTIKSAVTAAVNSEPRMGASLVRLHFHDCFVQGCDASVLLSG-----QEQNAGPNAGSLRGFNVVDNIKTQVEAICSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGL-DVTDMVALSGAHTIGQAQCQNFRDRLYNETN-------IDSSFATALKANCPRPTGSGDSNLAPLDTTTPNAFDSAYYTN 248          
BLAST of CN184750 vs. ExPASy Swiss-Prot
Match: PER2_CUCSA (Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.608e-61
Identity = 123/232 (53.02%), Postives = 155/232 (66.81%), Query Frame = 1
Query:   64 SFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSN 759
            +FY  +CP+V N +  V+++A  SD R GA LIRLHFHDCFV+GCD S+LL+    + SE  AAP N +  GF +++N+KAAVE+ACP VVSCADIL IA+  SV L+GGP W V LGRRDSR AN   A   LP PF+ + +LK  F  V L D  DLVALSGAHTFG+++CQFF  RL    N   PD TL+  + QQLR+ C  G +     N D TTP+ FD  Y++N
Sbjct:    1 TFYDESCPDVSNIVRRVVQQALVSDERAGARLIRLHFHDCFVNGCDGSVLLEDQPGVVSE-LAAPGNANITGFNIVNNIKAAVEKACPGVVSCADILAIASVGSVNLAGGPCWEVQLGRRDSRRANLQGAIDGLPSPFENVTQLKRKFDRVDL-DSTDLVALSGAHTFGKSRCQFFDRRL----NVSNPDSTLNPRYAQQLRQACSSGRD--TFVNLDPTTPNKFDKNYYTN 224          
BLAST of CN184750 vs. ExPASy Swiss-Prot
Match: PER4_ARATH (Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 7.860e-61
Identity = 123/239 (51.46%), Postives = 160/239 (66.95%), Query Frame = 1
Query:   43 SQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSN 759
            SQAQLSP+FY  TC N L+TI   ++ A S + R+ ASLIRLHFHDCFV+GCDAS++L +T T++SE+ +  N  SARGFEVID  K+AVE  CP VVSCADI+ +AA  +    GGP + V +GRRDS  A RA+A+++LP    +L++L   F   GLN + DLVALSGAHT G+AQC  F+GRLYD ++       +DA F    ++ CP  G    LA  D  TP+ FDN Y+ N
Sbjct:   17 SQAQLSPTFYDQTCQNALSTIRSSIRTAISRERRMAASLIRLHFHDCFVNGCDASVMLVATPTMESERDSLANFQSARGFEVIDQAKSAVESVCPGVVSCADIIAVAARDASEYVGGPRYDVKVGRRDSTNAFRAIADRDLPNFRASLNDLSELFLRKGLNTR-DLVALSGAHTLGQAQCLTFKGRLYDNSS------DIDAGFSSTRKRRCPVNGGDTTLAPLDQVTPNSFDNNYYRN 248          
BLAST of CN184750 vs. ExPASy Swiss-Prot
Match: PER70_MAIZE (Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.341e-60
Identity = 128/249 (51.41%), Postives = 158/249 (63.45%), Query Frame = 1
Query:   19 LXVLEGSPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCP-QGGNG-GVLANFDVTTPDVFDNKYFSN 759
            L +   + + AQLSP+FYS +CP  L TI+  +  A + + R+GASL+RLHFHDCFV GCD S+LL+ T T   E+ A PN  S RGF V+DN+KA VE  CP VVSCADIL +AA  SV   GGPSW V LGRRDS TA+ ALAN +LP P   L  L ++F    L+ + DLVALSGAHT G AQC+ FR  +Y+       D  ++A F    R  CP   GNG G LA  D  TP  FDN Y++N
Sbjct:   15 LCLAAAAVASAQLSPTFYSRSCPRALATIKAAVTAAVAQEARMGASLLRLHFHDCFVQGCDGSVLLNDTATFTGEQTANPNVGSIRGFGVVDNIKAQVEAVCPGVVSCADILAVAARDSVVALGGPSWRVLLGRRDSTTASLALANSDLPAPSLDLANLTAAFAKKRLS-RTDLVALSGAHTIGLAQCKNFRAHIYN-------DTNVNAAFATLRRANCPAAAGNGDGNLAPLDTATPTAFDNAYYTN 255          
BLAST of CN184750 vs. ExPASy Swiss-Prot
Match: PER68_ARATH (Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=2 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 5.095e-60
Identity = 127/246 (51.63%), Postives = 160/246 (65.04%), Query Frame = 1
Query:   25 VLEGSPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQN-LPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCP--QGGNGGVLANFDVTTPDVFDNKYF 753
            V+ GS +QAQL   FYS +CP++L T+  V+++  + + RI ASL+RL FHDCFV+GCDASILLD T +   EK A PNNNS RG+EVID +K+ VER CP VVSCADIL I A  SV L GG  W+V LGRRDS TA+ + AN   LP P  TLD L + FR  GL+ + D+VALSGAHT G+A+C  FR R+Y+  N       +D +F    R+ CP   G      A  D+ TP+ FD  YF
Sbjct:   20 VMLGSQAQAQLRTDFYSDSCPSLLPTVRRVVQREVAKERRIAASLLRLFFHDCFVNGCDASILLDDTRSFLGEKTAGPNNNSVRGYEVIDAIKSRVERLCPGVVSCADILAITARDSVLLMGGRGWSVKLGRRDSITASFSTANSGVLPPPTSTLDNLINLFRANGLSPR-DMVALSGAHTIGQARCVTFRSRIYNSTN-------IDLSFALSRRRSCPAATGSGDNNAAILDLRTPEKFDGSYF 257          
BLAST of CN184750 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 8.690e-60
Identity = 123/241 (51.04%), Postives = 155/241 (64.32%), Query Frame = 1
Query:   43 SQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQ--GGNGGVLANFDVTTPDVFDNKYFSN 759
            + AQLSP+FY ++CP  L TI+  +  A +SD R+GASL+RLHFHDCFV GCDAS+LL        E+ A PN  S RGF VID++K  +E  C + VSCADILT+AA  SV   GGPSW VPLGRRDS  AN   AN +LPG   +  EL+++F   G  + +D+VALSGAHT G+AQC  FR R+Y        D  ++A +   LR  CPQ  G   G LAN D TT + FDN Y++N
Sbjct:   19 ASAQLSPTFYDTSCPRALATIKSGVMAAVTSDPRMGASLLRLHFHDCFVQGCDASVLLSGM-----EQNAIPNAGSLRGFGVIDSIKTQIEAICKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSIDANENEANTDLPGFNSSRAELEAAFLKKGGLNTVDMVALSGAHTIGQAQCSTFRARIYG------GDTNINAAYAASLRANCPQTVGSGDGSLANLDTTTANTFDNAYYTN 248          
The following BLAST results are available for this feature:
BLAST of CN184750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PERP7_BRARA3.191e-6251.26Peroxidase P7 OS=Brassica rapa PE=1 SV=3[more]
PER4_VITVI4.168e-6250.20Peroxidase 4 OS=Vitis vinifera GN=GSVIVT0002396700... [more]
PER36_ARATH7.109e-6247.74Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=... [more]
PER2_ORYSJ4.608e-6151.44Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER2_ORYSI4.608e-6151.44Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX1... [more]
PER2_CUCSA4.608e-6153.02Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV... [more]
PER4_ARATH7.860e-6151.46Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 ... [more]
PER70_MAIZE1.341e-6051.41Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1[more]
PER68_ARATH5.095e-6051.63Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=... [more]
PER1_HORVU8.690e-6051.04Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0006A12_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184750 ID=CN184750; Name=CN184750; organism=Citrus sinensis; type=EST; length=759bp
ATCCCCCTGGGCTGCAGGCTTTNTGTGCTTGAGGGATCACCATCTCAAGC
TCAACTTTCTCCATCTTTTTATTCTTCCACATGCCCTAATGTATTGAACA
CTATCGAGGATGTGCTTAAGAAAGCTTTCTCGTCCGATATCCGGATCGGT
GCCAGCCTCATCAGGCTTCATTTCCATGACTGTTTTGTTGATGGGTGTGA
TGCATCGATTTTGCTGGACAGCACTAACACCATAGACAGCGAGAAATTTG
CTGCGCCAAATAACAATTCGGCGAGGGGTTTTGAAGTTATTGATAACATG
AAAGCTGCCGTTGAAAGGGCATGTCCAAGGGTTGTTTCCTGCGCTGATAT
TCTTACTATTGCGGCTGAACGATCCGTTGCTTTGTCAGGGGGTCCGTCAT
GGGCAGTTCCATTGGGAAGAAGAGACAGCAGAACGGCAAACAGAGCTCTT
GCAAATCAGAATCTTCCAGGACCATTTGATACTCTTGATGAGCTCAAATC
TAGTTTTAGAAATGTTGGCCTCAATGACAAGCTTGATCTTGTTGCACTCT
CCGGAGCACACACGTTCGGAAGGGCTCAGTGCCAATTTTTCAGGGGCAGA
TTATACGATTTTAACAACACTGGCAAGCCAGACCCAACCCTAGACGCAAC
CTTCTTACAACAACTGAGGAAACTATGCCCACAAGGTGGAAACGGCGGCG
TTCTTGCTAATTTTGATGTCACGACACCTGATGTTTTCGACAACAAATAC
TTCTCCAAT
back to top