CN184750

Overview
NameCN184750
Unique NameCN184750
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184750 vs. ExPASy Swiss-Prot
Match: PER12_ARATH (Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.145e-50
Identity = 110/241 (45.64%), Postives = 145/241 (60.17%), Query Frame = 1
Query:   37 SPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPN-NNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRT-ANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYF 753
            +P    LS +FY   CP V N I   LKK F  DI + A+++R+HFHDCFV GC+AS+LL  + +   E+ + PN     + F VI+N++A V++ C +VVSC+DIL +AA  SV LSGGP +AVPLGRRDS   A++     NLP PF    +L + F N  LN   DLVALSG HT G A C  F  RLY        DPT++  F   L++ CP   +     N D+ +PDVFDNKY+
Sbjct:   38 APIVKGLSWNFYQKACPKVENIIRKELKKVFKRDIGLAAAILRIHFHDCFVQGCEASVLLAGSASGPGEQSSIPNLTLRQQAFVVINNLRALVQKKCGQVVSCSDILALAARDSVVLSGGPDYAVPLGRRDSLAFASQETTLNNLPPPFFNASQLIADFANRNLN-ITDLVALSGGHTIGIAHCPSFTDRLYP-----NQDPTMNQFFANSLKRTCPTANSSNTQVN-DIRSPDVFDNKYY 271          
BLAST of CN184750 vs. ExPASy Swiss-Prot
Match: PER39_ARATH (Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.802e-50
Identity = 101/238 (42.44%), Postives = 142/238 (59.66%), Query Frame = 1
Query:   43 SQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLR-KLCPQGGNGGVLANFDVTTPDVFDNKYF 753
            S+AQL   FY  TCP     ++DV+ +  ++   + A LIR+HFHDCFV GCD SIL+++T++    +  AP N + RGF+ ID +K+A+E  CP +VSCADI+T+A   S+   GGP+W VP GRRD R +N A A  N+P PF     L + F N GL+ K DLV LSGAHT G + C  F  RL++F   G  DP+LD+ +   L+ + C    +       D  + + FD  Y+
Sbjct:   21 SEAQLKMGFYDQTCPYAEKIVQDVVNQHINNAPSLAAGLIRMHFHDCFVRGCDGSILINATSSNQQVEKLAPPNLTVRGFDFIDKVKSALESKCPGIVSCADIITLATRDSIVAIGGPTWNVPTGRRDGRISNFAEAMNNIPPPFGNFTTLITLFGNQGLDVK-DLVLLSGAHTIGVSHCSSFSNRLFNFTGVGDQDPSLDSEYADNLKSRRCLSIADNTTKVEMDPGSRNTFDLSYY 257          
BLAST of CN184750 vs. ExPASy Swiss-Prot
Match: PER20_ARATH (Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 8.153e-50
Identity = 114/238 (47.90%), Postives = 143/238 (60.08%), Query Frame = 1
Query:   55 LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFN--NTGKPDP-TLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSN 759
            L   FY  +CP     ++  ++ A   D R+ ASL+RL FHDCFV GCDAS+LLD+   + SEK A PN NS RGFEVID +K  +E ACP  VSC+DIL +AA  SV L GGP W V LGRRDS  A+ A ANQ +P P  +LD L  +F+  GLN + DL+ALSGAHT G+A+C  F+ R+   N   T   D     +TF + L   C        L+  D+ TP  FDN YF N
Sbjct:   30 LLKGFYKESCPLAEEIVKHNIEVAVLKDPRMAASLLRLQFHDCFVLGCDASVLLDTHGDMLSEKQATPNLNSLRGFEVIDYIKYLLEEACPLTVSCSDILALAARDSVFLRGGPWWEVLLGRRDSLKASFAGANQFIPAPNSSLDSLIINFKQQGLNIQ-DLIALSGAHTIGKARCVSFKQRIVQPNMEQTFYVDEFRRHSTFRRVLGSQCKDSSRDNELSPLDIKTPAYFDNHYFIN 266          
BLAST of CN184750 vs. ExPASy Swiss-Prot
Match: PER62_ARATH (Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.372e-49
Identity = 109/233 (46.78%), Postives = 139/233 (59.66%), Query Frame = 1
Query:   67 FYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVAL-SGAHTFGRAQCQFFRGRLYDFNNTGK-PDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSN 759
            FYS+TCPN    +   +   F SD ++   L+R+H HDCFV GCD S+LL   N   SE+ A  N N   GFEVID+ K  +E ACP VVSCADIL +AA  SV+L+ G SW VP GRRD R +  +  N NLP P D+L   +  F    LN + DLV L  G HT G A C F   R+  FN++G   DPT+D TF+ QL++LCPQ G+G    + D  + + FD  YF N
Sbjct:   29 FYSTTCPNAETIVRTTVASHFGSDPKVAPGLLRMHNHDCFVQGCDGSVLLSGPN---SERTAGANVN-LHGFEVIDDAKRQLEAACPGVVSCADILALAARDSVSLTNGQSWQVPTGRRDGRVSLASNVN-NLPSPSDSLAIQQRKFSAFRLNTR-DLVTLVGGGHTIGTAACGFITNRI--FNSSGNTADPTMDQTFVPQLQRLCPQNGDGSARVDLDTGSGNTFDTSYFIN 253          
BLAST of CN184750 vs. ExPASy Swiss-Prot
Match: PER30_ARATH (Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=1 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.284e-49
Identity = 99/238 (41.60%), Postives = 142/238 (59.66%), Query Frame = 1
Query:   43 SQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLR-KLCPQGGNGGVLANFDVTTPDVFDNKYF 753
            S+AQL  +FY+ +CPN    I D ++    +   + A LIR+HFHDCFV GCD S+L++ST+   + +  AP N + RGF  ++ +KA +E+ CP+ VSCADI+ + A  +V  +GGPSW+VP GRRD R +N+  A  N+P P      L+  F+N GLN K DLV LSGAHT G + C     RLY+F+ T K DP+LD+ +   L+   C    +   +   D  +   FD  Y+
Sbjct:   25 SEAQLQMNFYAKSCPNAEKIISDHIQNHIHNGPSLAAPLIRMHFHDCFVRGCDGSVLINSTS--GNAERDAPPNLTLRGFGFVERIKALLEKVCPKTVSCADIIALTARDAVVATGGPSWSVPTGRRDGRISNKTEATNNIPPPTSNFTTLQRLFKNQGLNLK-DLVLLSGAHTIGVSHCSSMNTRLYNFSTTVKQDPSLDSQYAANLKANKCKSLNDNSTILEMDPGSSRSFDLSYY 259          
BLAST of CN184750 vs. ExPASy Swiss-Prot
Match: PER27_ARATH (Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=1 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 6.902e-49
Identity = 109/251 (43.43%), Postives = 144/251 (57.37%), Query Frame = 1
Query:    7 LGCRLXVLEGSPSQAQ-LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFS 756
            + C   VL  + + +Q L   FYS TCP +   ++ V+  A +    +GA L+R+ FHDCFV GCD S+LLD  N    EK A PN  S RGF +ID+ KAA+E+ CP +VSC+DIL + A  ++    GPSW V  GRRD R +N  +   NLP PFD + +L S FR+ GLN+K DLV LSG HT G   C     RLY+F   G  DP+LD+ +  +LRK C        L   D  +   FD  YF+
Sbjct:    9 VSCLFLVLLFAQANSQGLKVGFYSKTCPQLEGIVKKVVFDAMNKAPTLGAPLLRMFFHDCFVRGCDGSVLLDKPNN-QGEKSAVPNL-SLRGFGIIDDSKAALEKVCPGIVSCSDILALVARDAMVALEGPSWEVETGRRDGRVSN--INEVNLPSPFDNITKLISDFRSKGLNEK-DLVILSGGHTIGMGHCPLLTNRLYNFTGKGDSDPSLDSEYAAKLRKKCKPTDTTTAL-EMDPGSFKTFDLSYFT 253          
BLAST of CN184750 vs. ExPASy Swiss-Prot
Match: PER69_ARATH (Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 9.014e-49
Identity = 107/228 (46.93%), Postives = 139/228 (60.96%), Query Frame = 1
Query:   67 FYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKY 750
            FY + C NV + +  V++    S       ++R+HFHDCFV GCD S+LL + NT  SE+ A PN  S RGFEVI+  KA +E+ACPR VSCADILT+AA  +V L+GG  W VPLGR D R +    ++ NLPGP D++ + K  F    LN  LDLV L G HT G A C   RGR  +FN TG+PDP++D +F+  +   CPQ  NGG     D  + D FD  +
Sbjct:   41 FYGNRCRNVESIVRSVVQSHVRSIPANAPGILRMHFHDCFVHGCDGSVLL-AGNT--SERTAVPNR-SLRGFEVIEEAKARLEKACPRTVSCADILTLAARDAVVLTGGQRWEVPLGRLDGRISQ--ASDVNLPGPSDSVAKQKQDFAAKTLN-TLDLVTLVGGHTIGTAGCGLVRGRFVNFNGTGQPDPSIDPSFVPLILAQCPQ--NGGTRVELDEGSVDKFDTSF 259          
BLAST of CN184750 vs. ExPASy Swiss-Prot
Match: PER66_ARATH (Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 9.966e-48
Identity = 106/239 (44.35%), Postives = 144/239 (60.25%), Query Frame = 1
Query:   40 PSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDV-TTPDVFDNKYF 753
            PS+A L   +Y  +CP     I + ++ A   D ++ A L+R+ FHDCF+ GCDASILLDST +  +EK   P N S R F VI++ K  +E+ACPR VSCAD++ IAA   V LSGGP W+V  GR+D  T +RA   +NLP P   + +L  SF   GL+ K D+V LSG HT G + C  F  RL +F+     DP+++  F Q L+K CP+  N G  A   + +T  VFDN Y+
Sbjct:   21 PSEAALDAHYYDQSCPAAEKIILETVRNATLYDPKVPARLLRMFFHDCFIRGCDASILLDSTRSNQAEK-DGPPNISVRSFYVIEDAKRKLEKACPRTVSCADVIAIAARDVVTLSGGPYWSVLKGRKDG-TISRANETRNLPPPTFNVSQLIQSFAARGLSVK-DMVTLSGGHTIGFSHCSSFESRLQNFSKFHDIDPSMNYAFAQTLKKKCPRTSNRGKNAGTVLDSTSSVFDNVYY 256          
BLAST of CN184750 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.220e-47
Identity = 100/233 (42.92%), Postives = 136/233 (58.37%), Query Frame = 1
Query:   55 LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYF 753
            L   +Y S CP     +  V  +  S    + A L+R+HFHDCFV GCD S+LL S    D+E+ A PN  + +G+EV+D  K A+ER CP ++SCAD+L + A  +VA+ GGP W VPLGRRD R +    A  NLP PF  +  LK +F N GLN K DLV LSG HT G + C     RLY+F   G  DP+++ +++++L++ CP       L N D  +   FD  YF
Sbjct:   26 LDLDYYRSKCPKAEEIVRGVTVQYVSRQKTLAAKLLRMHFHDCFVRGCDGSVLLKSAKN-DAERDAVPNL-TLKGYEVVDAAKTALERKCPNLISCADVLALVARDAVAVIGGPWWPVPLGRRDGRISKLNDALLNLPSPFADIKTLKKNFANKGLNAK-DLVVLSGGHTIGISSCALVNSRLYNFTGKGDSDPSMNPSYVRELKRKCPPTDFRTSL-NMDPGSALTFDTHYF 254          
BLAST of CN184750 vs. ExPASy Swiss-Prot
Match: PER13_ARATH (Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=1 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 2.900e-47
Identity = 114/240 (47.50%), Postives = 146/240 (60.83%), Query Frame = 1
Query:   43 SQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALS-GAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSN 759
            S AQL   FYS TCP+  + + DV+++A ++D    A L+RL FHDCFV+GCD SIL+      D E+FAA N   A GF+VID  K+ +ER CP VVSCADI+ +AA  ++A + GP + VP GRRD   AN   A +NLP   D+++ LKS FR  GL+D+ DLV LS GAHT G   C F   RL         DPT++  F Q LR  CPQGG+  V    D  +  VFDN+ F N
Sbjct:   20 SAAQLQFGFYSETCPSAESIVRDVVQQAVTNDPGKAAVLLRLQFHDCFVEGCDGSILIKHGGN-DDERFAAGNAGVA-GFDVIDEAKSELERFCPGVVSCADIVALAARDAIAEAKGPFYEVPTGRRDGLIANVDHA-KNLPDVQDSINTLKSKFREKGLSDQ-DLVLLSAGAHTIGTTACFFVIPRL------DAQDPTINPEFFQILRSKCPQGGDVNVRIPLDWDSQFVFDNQIFQN 249          
The following BLAST results are available for this feature:
BLAST of CN184750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER12_ARATH2.145e-5045.64Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=... [more]
PER39_ARATH2.802e-5042.44Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=... [more]
PER20_ARATH8.153e-5047.90Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=... [more]
PER62_ARATH2.372e-4946.78Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=... [more]
PER30_ARATH5.284e-4941.60Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=... [more]
PER27_ARATH6.902e-4943.43Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=... [more]
PER69_ARATH9.014e-4946.93Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=... [more]
PER66_ARATH9.966e-4844.35Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=... [more]
PER1_ARATH2.220e-4742.92Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]
PER13_ARATH2.900e-4747.50Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006A12_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184750 ID=CN184750; Name=CN184750; organism=Citrus sinensis; type=EST; length=759bp
ATCCCCCTGGGCTGCAGGCTTTNTGTGCTTGAGGGATCACCATCTCAAGC
TCAACTTTCTCCATCTTTTTATTCTTCCACATGCCCTAATGTATTGAACA
CTATCGAGGATGTGCTTAAGAAAGCTTTCTCGTCCGATATCCGGATCGGT
GCCAGCCTCATCAGGCTTCATTTCCATGACTGTTTTGTTGATGGGTGTGA
TGCATCGATTTTGCTGGACAGCACTAACACCATAGACAGCGAGAAATTTG
CTGCGCCAAATAACAATTCGGCGAGGGGTTTTGAAGTTATTGATAACATG
AAAGCTGCCGTTGAAAGGGCATGTCCAAGGGTTGTTTCCTGCGCTGATAT
TCTTACTATTGCGGCTGAACGATCCGTTGCTTTGTCAGGGGGTCCGTCAT
GGGCAGTTCCATTGGGAAGAAGAGACAGCAGAACGGCAAACAGAGCTCTT
GCAAATCAGAATCTTCCAGGACCATTTGATACTCTTGATGAGCTCAAATC
TAGTTTTAGAAATGTTGGCCTCAATGACAAGCTTGATCTTGTTGCACTCT
CCGGAGCACACACGTTCGGAAGGGCTCAGTGCCAATTTTTCAGGGGCAGA
TTATACGATTTTAACAACACTGGCAAGCCAGACCCAACCCTAGACGCAAC
CTTCTTACAACAACTGAGGAAACTATGCCCACAAGGTGGAAACGGCGGCG
TTCTTGCTAATTTTGATGTCACGACACCTGATGTTTTCGACAACAAATAC
TTCTCCAAT
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