CN184748
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184748 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.123e-21 Identity = 71/211 (33.65%), Postives = 101/211 (47.87%), Query Frame = 3 Query: 264 DPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFKFA--------------STRTLFIVQLLLMGFAETKRY--------MDYISPGSQAKEGSFFGLEASXXXXXXXXXXXXXXXXXXXAKDIRNARDWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 827 + P YL G GD+G+D GL DPE+ + E++H R+AM G G +F +LL G++ VW++AG+ F S ++ Q++LMG E R +D + PG GSF L A+D + K+KEIKNGRLAM +M G FVQA VT GP++N+ +HL+DP Sbjct: 64 ESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPG-----GSFDPL--------------------GLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 249
BLAST of CN184748 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.303e-21 Identity = 71/211 (33.65%), Postives = 101/211 (47.87%), Query Frame = 3 Query: 264 DPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFKFA--------------STRTLFIVQLLLMGFAETKRY--------MDYISPGSQAKEGSFFGLEASXXXXXXXXXXXXXXXXXXXAKDIRNARDWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 827 + P YL G GD+G+D GL DPE+ + E++H R+AM G G +F +LL G++ VW++AG+ F S ++ Q++LMG E R +D + PG GSF L A+D + K+KEIKNGRLAM +M G FVQA VT GP++N+ +HL+DP Sbjct: 64 ESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPG-----GSFDPL--------------------GLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 249
BLAST of CN184748 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.303e-21 Identity = 71/211 (33.65%), Postives = 101/211 (47.87%), Query Frame = 3 Query: 264 DPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFKFA--------------STRTLFIVQLLLMGFAETKRY--------MDYISPGSQAKEGSFFGLEASXXXXXXXXXXXXXXXXXXXAKDIRNARDWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 827 + P YL G GD+G+D GL DPE+ + E++H R+AM G G +F +LL G++ VW++AG+ F S ++ Q++LMG E R +D + PG GSF L A+D + K+KEIKNGRLAM +M G FVQA VT GP++N+ +HL+DP Sbjct: 65 ESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPG-----GSFDPL--------------------GLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTGKGPLENLADHLADP 250
BLAST of CN184748 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.303e-21 Identity = 71/211 (33.65%), Postives = 101/211 (47.87%), Query Frame = 3 Query: 264 DPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFKFA--------------STRTLFIVQLLLMGFAETKRY--------MDYISPGSQAKEGSFFGLEASXXXXXXXXXXXXXXXXXXXAKDIRNARDWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 827 + P YL G GD+G+D GL DPE+ + E++H R+AM G G +F +LL G++ VW++AG+ F S ++ Q++LMG E R +D + PG GSF L A+D + K+KEIKNGRLAM +M G FVQA VT GP++N+ +HL+DP Sbjct: 66 ESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPG-----GSFDPL--------------------GLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 251
BLAST of CN184748 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.303e-21 Identity = 71/211 (33.65%), Postives = 100/211 (47.39%), Query Frame = 3 Query: 264 DPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK--------------FASTRTLFIVQLLLMGFAETKR--------YMDYISPGSQAKEGSFFGLEASXXXXXXXXXXXXXXXXXXXAKDIRNARDWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 827 +PP YL G GD+G+D GL DPE+ + E++H+R+AM G G +F +LL G++ VW++AG+ F S ++ Q++LMG E R D I PG GSF L A D + K+KE+KNGRLAM +M G FVQA VT GP++N+ +HL+ P Sbjct: 62 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPG-----GSFDPL--------------------GLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAGP 247
BLAST of CN184748 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.303e-21 Identity = 71/212 (33.49%), Postives = 100/212 (47.17%), Query Frame = 3 Query: 264 DPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFKFA--------------STRTLFIVQLLLMGFAETKRYM---------DYISPGSQAKEGSFFGLEASXXXXXXXXXXXXXXXXXXXAKDIRNARDWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 827 + P YL G GD+G+D GL DPE+ + E++H+R+AM G G +F +LL G++ VW++AG+ F S ++ Q++LMG E R D + PG GSF L A D + K+KE+KNGRLAM +M G FVQA VT GPI+N+ +HL+DP Sbjct: 65 ESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPG-----GSFDPL--------------------GLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADP 251
BLAST of CN184748 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.303e-21 Identity = 71/211 (33.65%), Postives = 101/211 (47.87%), Query Frame = 3 Query: 264 DPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFKFA--------------STRTLFIVQLLLMGFAETKRY--------MDYISPGSQAKEGSFFGLEASXXXXXXXXXXXXXXXXXXXAKDIRNARDWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 827 + P YL G GD+G+D GL DPE+ + E++H R+AM G G +F +LL G++ VW++AG+ F S ++ Q++LMG E R +D + PG GSF L A+D + K+KEIKNGRLAM +M G FVQA VT GP++N+ +HL+DP Sbjct: 65 ESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPG-----GSFDPL--------------------GLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 250
BLAST of CN184748 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.303e-21 Identity = 71/212 (33.49%), Postives = 100/212 (47.17%), Query Frame = 3 Query: 264 DPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFKFA--------------STRTLFIVQLLLMGFAETKRYM---------DYISPGSQAKEGSFFGLEASXXXXXXXXXXXXXXXXXXXAKDIRNARDWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 827 + P YL G GD+G+D GL DPE+ + E++H+R+AM G G +F +LL G++ VW++AG+ F S ++ Q++LMG E R D + PG GSF L A D + K+KE+KNGRLAM +M G FVQA VT GPI+N+ +HL+DP Sbjct: 65 ESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPG-----GSFDPL--------------------GLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADP 251
BLAST of CN184748 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.303e-21 Identity = 70/209 (33.49%), Postives = 100/209 (47.85%), Query Frame = 3 Query: 270 PPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEF--------------KFASTRTLFIVQLLLMGFAETKRY--------MDYISPGSQAKEGSFFGLEASXXXXXXXXXXXXXXXXXXXAKDIRNARDWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 827 P YL G GD+G+D GL DPE+ + E++H+R+AM G G F +LL G++ VW++AG+ F S ++ Q++LMGF E R +D + PG G+F L A D + + K+KE+KNGRLAM +M G FVQA VT GPI N+ +H++DP Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYPG-----GAFDPL--------------------GLADDPDSFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADP 249
BLAST of CN184748 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.215e-20 Identity = 71/211 (33.65%), Postives = 100/211 (47.39%), Query Frame = 3 Query: 264 DPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFKFA--------------STRTLFIVQLLLMGFAETKRY--------MDYISPGSQAKEGSFFGLEASXXXXXXXXXXXXXXXXXXXAKDIRNARDWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 827 + P YL G GD+G+D GL DPE+ + E++H R+AM G G +F +LL G++ VW++AG+ F S ++ Q++LMG E R +D + PG GSF L A D + K+KEIKNGRLAM +M G FVQA VT GP++N+ +HL+DP Sbjct: 66 ESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPG-----GSFDPL--------------------GLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 251 The following BLAST results are available for this feature:
BLAST of CN184748 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184748 ID=CN184748; Name=CN184748; organism=Citrus sinensis; type=EST; length=842bpback to top |