CN184748
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184748 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.909e-19 Identity = 68/211 (32.23%), Postives = 100/211 (47.39%), Query Frame = 3 Query: 264 DPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK--------------FASTRTLFIVQLLLMGFAETKR--------YMDYISPGSQAKEGSFFGLEASXXXXXXXXXXXXXXXXXXXAKDIRNARDWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 827 + P YL G GD+G+D GL DPE+ + E++H+R+AM G G +F +LL G++ VW++AG+ F S ++ Q++LMG E R +D + PG GSF L A+ + K+KE+KNGRLAM +M G FV A VT GP++N+ +HL+DP Sbjct: 27 ESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPG-----GSFDPL--------------------GLAEVPEAFAELKVKELKNGRLAMFSMFGFFVPAIVTGKGPLENLADHLADP 212
BLAST of CN184748 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.667e-19 Identity = 68/198 (34.34%), Postives = 93/198 (46.97%), Query Frame = 3 Query: 285 GTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLR-VTGIR--ELPVWYEAGAVEFKFASTRTL--------------FIVQLLLMGFAETKRYMDYISPGSQAKEGSFFGLEASXXXXXXXXXXXXXXXXXXXAKDIRNARDWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 827 G GD+G+D GL DPE+ + Y + EL+HAR + G G++ +LL GI+ + +W++AGA F+ L VQ++LMG E Y G A EG A D + K+KEIKNGRLAM A LG FVQA VT GPI+N+ +HL++P Sbjct: 78 GEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVE-----GYRVNGGPAGEG------------LDPLYPGEAFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPIENLTDHLANP 258
BLAST of CN184748 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.667e-19 Identity = 68/211 (32.23%), Postives = 98/211 (46.45%), Query Frame = 3 Query: 264 DPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFKFA--------------STRTLFIVQLLLMGFAETKRY--------MDYISPGSQAKEGSFFGLEASXXXXXXXXXXXXXXXXXXXAKDIRNARDWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 827 + P YL G GD+G+D GL DP + + E++H R+ M G G +F +L G++ VW++AG+ FK S ++ Q++LMG E R +D + PG GSF L A D + ++KEIKNGRLAM +M G FVQA VT GP++N+ +HL+DP Sbjct: 65 EAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPG-----GSFDPL--------------------GLADDPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 250
BLAST of CN184748 vs. ExPASy Swiss-Prot
Match: CB22_SOYBN (Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.007e-15 Identity = 66/202 (32.67%), Postives = 93/202 (46.04%), Query Frame = 3 Query: 291 LAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFKFA--------------STRTLFIVQLLLMGFAETKRYM--------DYISPGSQAKEGSFFGLEASXXXXXXXXXXXXXXXXXXXAKDIRNARDWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 827 L G+F GL DPE+ + E++H+R+AM G G +F +LL G++ VW++AG+ F S ++ Q++LMG E R D I PG GSF L A D + K+KE+KNGRLAM +M G FVQA VT GP++N+ +HL+DP Sbjct: 68 LTGEFH----GLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPG-----GSFDPL--------------------GLADDPEALAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 240 The following BLAST results are available for this feature:
BLAST of CN184748 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184748 ID=CN184748; Name=CN184748; organism=Citrus sinensis; type=EST; length=842bpback to top |