CN184742
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184742 vs. ExPASy Swiss-Prot
Match: HSP78_SCHPO (Heat shock protein 78, mitochondrial OS=Schizosaccharomyces pombe GN=hsp78 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.353e-12 Identity = 31/45 (68.89%), Postives = 40/45 (88.89%), Query Frame = 2 Query: 380 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 514 LEEYGT+LT LA++GKLDPV+GR+ +I+R +QIL RRTKNNP L+ Sbjct: 94 LEEYGTDLTALAKQGKLDPVIGREEEIQRTIQILSRRTKNNPALV 138
BLAST of CN184742 vs. ExPASy Swiss-Prot
Match: CLPB_RICFE (Chaperone protein clpB OS=Rickettsia felis GN=clpB PE=3 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 3.073e-12 Identity = 51/177 (28.81%), Postives = 85/177 (48.02%), Query Frame = 2 Query: 5 EGTGIAAKVLKSMG--INLKDARVEVE-----KIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSXXXXXXXXXXXXXVAARVLENLGADPSNIRTQVIRMXXXXXXXXXXXXXXXXXXNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 514 E TGI ++ + G INL +V++E K+ G G ++ + A +VLE + A+ G +++ + +A ++L N G + + +++ N L++YG ++T+LAE GKLDP++GR +I R VQ+L RR KNNP LI Sbjct: 41 EETGIIQTLINNTGGNINLLKDQVQLELNKIPKVQVEGGG----QVYSSAEALKVLEKASSIAKDSGDSFV-TIERIFEALTYGNTIAGKILTNNGINSKKLAAAILQFRKGKKADTESAE------NSYDALKKYGRDVTELAESGKLDPIIGRDEEIRRTVQVLSRRMKNNPVLI 206
BLAST of CN184742 vs. ExPASy Swiss-Prot
Match: CLPB_SHIFL (Chaperone protein clpB OS=Shigella flexneri GN=clpB PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.013e-12 Identity = 53/172 (30.81%), Postives = 84/172 (48.84%), Query Frame = 2 Query: 14 GIAAKVLKSMGINLKDARVEVEKIIGR-----GSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSXXXXXXXXXXXXXVAARVLENLGADPSNIRTQVIRMXXXXXXXXXXXXXXXXXXNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 514 G + +L S GIN R ++ + + R G+G ++ + RVL L + A++ G N+I S +A +L+ GA +NI + +M ++ L++Y +LT+ AE+GKLDPV+GR +I R +Q+L RRTKNNP LI Sbjct: 44 GSVSPLLTSAGINAGQLRTDINQALNRLPQVEGTGG---DVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLAD-ILKATGATTANITQAIEQMRGGESVNDQGAE------DQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLI 205
BLAST of CN184742 vs. ExPASy Swiss-Prot
Match: CLPB_ECOLI (Chaperone protein clpB OS=Escherichia coli (strain K12) GN=clpB PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.013e-12 Identity = 53/172 (30.81%), Postives = 84/172 (48.84%), Query Frame = 2 Query: 14 GIAAKVLKSMGINLKDARVEVEKIIGR-----GSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSXXXXXXXXXXXXXVAARVLENLGADPSNIRTQVIRMXXXXXXXXXXXXXXXXXXNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 514 G + +L S GIN R ++ + + R G+G ++ + RVL L + A++ G N+I S +A +L+ GA +NI + +M ++ L++Y +LT+ AE+GKLDPV+GR +I R +Q+L RRTKNNP LI Sbjct: 44 GSVSPLLTSAGINAGQLRTDINQALNRLPQVEGTGG---DVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLAD-ILKAAGATTANITQAIEQMRGGESVNDQGAE------DQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLI 205
BLAST of CN184742 vs. ExPASy Swiss-Prot
Match: CLPB_ECOL6 (Chaperone protein clpB OS=Escherichia coli O6 GN=clpB PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.013e-12 Identity = 53/172 (30.81%), Postives = 84/172 (48.84%), Query Frame = 2 Query: 14 GIAAKVLKSMGINLKDARVEVEKIIGR-----GSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSXXXXXXXXXXXXXVAARVLENLGADPSNIRTQVIRMXXXXXXXXXXXXXXXXXXNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 514 G + +L S GIN R ++ + + R G+G ++ + RVL L + A++ G N+I S +A +L+ GA +NI + +M ++ L++Y +LT+ AE+GKLDPV+GR +I R +Q+L RRTKNNP LI Sbjct: 44 GSVSPLLTSAGINAGQLRTDINQALNRLPQVEGTGG---DVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLAD-ILKAAGATTANITQAIEQMRGGESVNDQGAE------DQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLI 205
BLAST of CN184742 vs. ExPASy Swiss-Prot
Match: CLPB_ECO57 (Chaperone protein clpB OS=Escherichia coli O157:H7 GN=clpB PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.013e-12 Identity = 53/172 (30.81%), Postives = 84/172 (48.84%), Query Frame = 2 Query: 14 GIAAKVLKSMGINLKDARVEVEKIIGR-----GSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSXXXXXXXXXXXXXVAARVLENLGADPSNIRTQVIRMXXXXXXXXXXXXXXXXXXNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 514 G + +L S GIN R ++ + + R G+G ++ + RVL L + A++ G N+I S +A +L+ GA +NI + +M ++ L++Y +LT+ AE+GKLDPV+GR +I R +Q+L RRTKNNP LI Sbjct: 44 GSVSPLLTSAGINAGQLRTDINQALNRLPQVEGTGG---DVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLAD-ILKAAGATTANITQAIEQMRGGESVNDQGAE------DQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLI 205
BLAST of CN184742 vs. ExPASy Swiss-Prot
Match: CLPB_BRAJA (Chaperone protein clpB OS=Bradyrhizobium japonicum GN=clpB PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.013e-12 Identity = 48/177 (27.12%), Postives = 77/177 (43.50%), Query Frame = 2 Query: 5 EGTGIAAKVLKSMGINLK-------DARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSXXXXXXXXXXXXXVAARVLENLGADPSNIRTQVIRMXXXXXXXXXXXXXXXXXXNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 514 + G+AA ++ G N + DA +V K+ G G+G +I P R + + + + G +++ A +L G P N+ + + N L++Y +LT+ A +GKLDPV+GR +I R +Q+L RRTKNNP LI Sbjct: 41 DNEGLAAGLIDRAGGNSRAILKATEDALNKVPKVSGGGAG----QIYLAPELARTFDAAEKAGEKAGDSFVTVERLLLGLTLEKTSEAGTILSKGGVTPQNLNAAIEALRKGRTADSATAE------NAYDALKKYARDLTQAARDGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLI 207
BLAST of CN184742 vs. ExPASy Swiss-Prot
Match: HSP78_CANAL (Heat shock protein 78, mitochondrial OS=Candida albicans GN=HSP78 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.940e-12 Identity = 31/47 (65.96%), Postives = 40/47 (85.11%), Query Frame = 2 Query: 374 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 514 P LE++G++LT+LA+EGKLDPV+GR +I R +QIL RRTKNNP LI Sbjct: 86 PALEKFGSDLTQLAKEGKLDPVIGRDHEIRRTIQILSRRTKNNPVLI 132
BLAST of CN184742 vs. ExPASy Swiss-Prot
Match: CLPB_PLEBO (Chaperone protein clpB OS=Plectonema boryanum GN=clpB PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 8.940e-12 Identity = 32/50 (64.00%), Postives = 39/50 (78.00%), Query Frame = 2 Query: 365 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 514 NK +LE+YG +LT+ A EGKLDPV+GR +I R +QIL RRTKNNP LI Sbjct: 159 NKYESLEKYGRDLTQYAREGKLDPVIGRDDEIRRTIQILSRRTKNNPVLI 208
BLAST of CN184742 vs. ExPASy Swiss-Prot
Match: CLPB_BDEBA (Chaperone protein clpB OS=Bdellovibrio bacteriovorus GN=clpB PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.940e-12 Identity = 51/174 (29.31%), Postives = 78/174 (44.83%), Query Frame = 2 Query: 14 GIAAKVLKSMGIN----LKDARVEVEK---IIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSXXXXXXXXXXXXXVAARVLENLGADPSNIRTQVIRMXXXXXXXXXXXXXXXXXXNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 514 GI ++L + + L + R +++K + G G A +PR +++ + + EA++ G +YI + + + RT + + NK L +Y +LT LA EGKLDPVVGR +I RVVQ+L RRTKNNP LI Sbjct: 39 GIVPRILDKLNVPQAQFLAELRTKIDKFPQVTGGGQKMFA-----SPRLEKIFQAAETEAQEWGDSYISTEHFFMAMLKGGDSELNGLFKKNKVTAEAARTALTEIRGKQKVTDDDPE------NKYEVLNKYARDLTALAAEGKLDPVVGRDEEIRRVVQVLSRRTKNNPVLI 201 The following BLAST results are available for this feature:
BLAST of CN184742 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184742 ID=CN184742; Name=CN184742; organism=Citrus sinensis; type=EST; length=516bpback to top |