CN184740

Overview
NameCN184740
Unique NameCN184740
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184740 vs. ExPASy Swiss-Prot
Match: PDC_ASPFU (Pyruvate decarboxylase OS=Aspergillus fumigatus GN=pdcA PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.392e-32
Identity = 74/166 (44.58%), Postives = 104/166 (62.65%), Query Frame = 3
Query:  237 LGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYISISCNL 734
            +  +L RRL E+G + V  VPGD+NL  LD+L  +  L+ VG CNELNAGYAADGYAR  G+ A + TF VG LS +NAIAGAYSE +P++ IVG P++       +LHHT+G  D+    R    ++ +   +N+  +   LID AI      S+PVYI++  ++
Sbjct:   16 VAEYLFRRLHEVGIRSVHGVPGDYNLAALDYL-PKCGLHWVGNCNELNAGYAADGYARVNGISALITTFGVGELSAINAIAGAYSEFVPIVHIVGQPHTRSQRDGMLLHHTLGNGDYNVFARMNAGVSTTVGRLNDTHEVATLIDNAIRECWIRSRPVYITLPTDM 180          
BLAST of CN184740 vs. ExPASy Swiss-Prot
Match: PDC1_CANGA (Pyruvate decarboxylase OS=Candida glabrata GN=PDC1 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.101e-32
Identity = 76/187 (40.64%), Postives = 107/187 (57.22%), Query Frame = 3
Query:  234 TLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYISISCNLPGIPHPT-FARDPVPFFLAP 791
            TLGR+L  RL ++  K +F +PGDFNL+LLD +     +   G  NELNA YAADGYAR +G+   + TF VG LS LN IAG+Y+E++ V+ +VG P+ +      +LHHT+G  DFT   R    I+ + A+V ++  A   ID  I T     +PVY+ +  NL  +  P      P+   L P
Sbjct:    5 TLGRYLFERLNQVDVKTIFGLPGDFNLSLLDKIYEVEGMRWAGNANELNAAYAADGYARIKGMSCIITTFGVGELSALNGIAGSYAEHVGVLHVVGVPSISSQAKQLLLHHTLGNGDFTVFHRMSANISETTAMVTDIATAPAEIDRCIRTTYITQRPVYLGLPANLVDLKVPAKLLETPIDLSLKP 191          
BLAST of CN184740 vs. ExPASy Swiss-Prot
Match: PDC5_YEAST (Pyruvate decarboxylase isozyme 2 OS=Saccharomyces cerevisiae GN=PDC5 PE=1 SV=4)

HSP 1 Score: 138.658 bits (348), Expect = 4.051e-32
Identity = 75/187 (40.11%), Postives = 107/187 (57.22%), Query Frame = 3
Query:  234 TLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYISISCNLPGIPHPT-FARDPVPFFLAP 791
            TLG++L  RL ++    VF +PGDFNL+LLD L     +   G  NELNA YAADGYAR +G+   + TF VG LS LN IAG+Y+E++ V+ +VG P+ +      +LHHT+G  DFT   R    I+ + A++ ++ +A   ID  I T     +PVY+ +  NL  +  P      P+   L P
Sbjct:    5 TLGKYLFERLSQVNCNTVFGLPGDFNLSLLDKLYEVKGMRWAGNANELNAAYAADGYARIKGMSCIITTFGVGELSALNGIAGSYAEHVGVLHVVGVPSISSQAKQLLLHHTLGNGDFTVFHRMSANISETTAMITDIANAPAEIDRCIRTTYTTQRPVYLGLPANLVDLNVPAKLLETPIDLSLKP 191          
BLAST of CN184740 vs. ExPASy Swiss-Prot
Match: PDC4_SCHPO (Putative pyruvate decarboxylase C3G9.11c OS=Schizosaccharomyces pombe GN=SPAC3G9.11c PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.051e-32
Identity = 72/164 (43.90%), Postives = 100/164 (60.98%), Query Frame = 3
Query:  237 LGRHLARRLVEIGAKDVFSVPGDFNLTLLDHL--IAEPELNLVGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYISI 722
            +G +L  RL+++G K +  VPGDFNL LLD +  + +     VG  NELN  YAAD YAR +G+ A V TF VG LS LN  AGAYSE +PV+ IVG PN+    T  +LHHT+G  DF    R    ++   A +++   A  LID  + T ++ S+PVY+++
Sbjct:    8 VGEYLFTRLLQLGIKSILGVPGDFNLALLDLIEKVGDETFRWVGNENELNGAYAADAYARVKGISAIVTTFGVGELSALNGFAGAYSERIPVVHIVGVPNTKAQATRPLLHHTLGNGDFKVFQRMSSELSADVAFLDSGDSAGRLIDNLLETCVRTSRPVYLAV 171          
BLAST of CN184740 vs. ExPASy Swiss-Prot
Match: PDC_HANUV (Pyruvate decarboxylase OS=Hanseniaspora uvarum GN=PDC PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.010e-31
Identity = 73/173 (42.20%), Postives = 102/173 (58.96%), Query Frame = 3
Query:  234 TLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYISISCNLPGIPHP 752
            TLGR++  R+ ++G   +F +PGDFNL+LLD +     L      NELNA YAADGY+R +G+G  + TF VG LS LN IAGAY+E++ V+ IVG P+        +LHHT+G  DF    R    I+ + A++ +L  A   ID  I TA    +PVY+ +  NL  +  P
Sbjct:    5 TLGRYVFERIKQVGVNTIFGLPGDFNLSLLDKIYEVEGLRWAASLNELNAAYAADGYSRIKGLGVIITTFGVGELSALNGIAGAYAEHVGVLHIVGVPSLASQAKQLLLHHTLGNGDFDVFHRMSANISETTAMITDLAAAPAEIDRCIRTAYIAQRPVYLGLPANLVDLNVP 177          
BLAST of CN184740 vs. ExPASy Swiss-Prot
Match: PDC_ASPPA (Pyruvate decarboxylase OS=Aspergillus parasiticus GN=pdcA PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.010e-31
Identity = 80/199 (40.20%), Postives = 115/199 (57.79%), Query Frame = 3
Query:  237 LGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYISISCNLPGIPHPTFARDPVPFFLAPKVSHQLGLEAAVEA 833
            L ++L +RL+++G   +F VPGD+NLTLLDH++    L  VG CNELNAGYAADGY+R + +GA V TF VG LS +NAIAGAY+E  PV+ IVG P      +  ++HHT    D+ +     + +T +Q  +++   A   ID  +   L  S+PV I+I  ++  +  P  A       + P V      EAA+ A
Sbjct:    8 LAQYLFKRLLQLGVDSIFGVPGDYNLTLLDHVVPSG-LKWVGNCNELNAGYAADGYSRIKDIGAVVTTFGVGELSAINAIAGAYAEKAPVVHIVGTPMRASQESRALIHHTFNDGDYQRFDAIQEHVTVAQVSLSDHRTAPSEIDRILLQCLLHSRPVRIAIPVDMVPVLVPV-AGLSSKIQIPPAVRQPQAEEAALNA 204          
BLAST of CN184740 vs. ExPASy Swiss-Prot
Match: PDC1_YEAST (Pyruvate decarboxylase isozyme 1 OS=Saccharomyces cerevisiae GN=PDC1 PE=1 SV=7)

HSP 1 Score: 136.346 bits (342), Expect = 2.010e-31
Identity = 74/187 (39.57%), Postives = 107/187 (57.22%), Query Frame = 3
Query:  234 TLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYISISCNLPGIPHPT-FARDPVPFFLAP 791
            TLG++L  RL ++    VF +PGDFNL+LLD +     +   G  NELNA YAADGYAR +G+   + TF VG LS LN IAG+Y+E++ V+ +VG P+ +      +LHHT+G  DFT   R    I+ + A++ ++  A   ID  I T     +PVY+ +  NL  +  P    + P+   L P
Sbjct:    5 TLGKYLFERLKQVNVNTVFGLPGDFNLSLLDKIYEVEGMRWAGNANELNAAYAADGYARIKGMSCIITTFGVGELSALNGIAGSYAEHVGVLHVVGVPSISAQAKQLLLHHTLGNGDFTVFHRMSANISETTAMITDIATAPAEIDRCIRTTYVTQRPVYLGLPANLVDLNVPAKLLQTPIDMSLKP 191          
BLAST of CN184740 vs. ExPASy Swiss-Prot
Match: PDC6_YEAST (Pyruvate decarboxylase isozyme 3 OS=Saccharomyces cerevisiae GN=PDC6 PE=1 SV=3)

HSP 1 Score: 134.035 bits (336), Expect = 9.977e-31
Identity = 73/187 (39.04%), Postives = 106/187 (56.68%), Query Frame = 3
Query:  234 TLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYISISCNLPGIPHP-TFARDPVPFFLAP 791
            TLG++L  RL ++    +F +PGDFNL+LLD +     L   G  NELNA YAADGYAR +G+   V TF VG LS LN IAG+Y+E++ V+ +VG P+ +      +LHHT+G  DFT   R    I+ + +++ ++  A   ID  I T     +P Y+ +  NL  +  P +    P+   L P
Sbjct:    5 TLGKYLFERLKQVNVNTIFGLPGDFNLSLLDKIYEVDGLRWAGNANELNAAYAADGYARIKGLSVLVTTFGVGELSALNGIAGSYAEHVGVLHVVGVPSISAQAKQLLLHHTLGNGDFTVFHRMSANISETTSMITDIATAPSEIDRLIRTTFITQRPSYLGLPANLVDLKVPGSLLEKPIDLSLKP 191          
BLAST of CN184740 vs. ExPASy Swiss-Prot
Match: THI3_YEAST (Thiamine metabolism regulatory protein THI3 OS=Saccharomyces cerevisiae GN=THI3 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.665e-26
Identity = 61/167 (36.53%), Postives = 95/167 (56.89%), Query Frame = 3
Query:  246 HLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYISISCNLPGIP 746
            +L  RL ++    +F + G+F++ LLD L   P L   G  NELNA YAADGY+R +G+G  + TF VG LS +N +AG+Y+E++ ++ IVG P ++      +LHHT+G  DFT   R    + C   ++ +     + +D  I  A  E +PVY+ +  N   +P
Sbjct:   20 YLFHRLNQLNIHTIFGLSGEFSMPLLDKLYNIPNLRWAGNSNELNAAYAADGYSRLKGLGCLITTFGVGELSAINGVAGSYAEHVGILHIVGMPPTSAQTKQLLLHHTLGNGDFTVFHRIASDVACYTTLIIDSELCADEVDKCIKKAWIEQRPVYMGMPVNQVNLP 186          
BLAST of CN184740 vs. ExPASy Swiss-Prot
Match: ARO10_YEAST (Transaminated amino acid decarboxylase OS=Saccharomyces cerevisiae GN=ARO10 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.925e-24
Identity = 75/197 (38.07%), Postives = 104/197 (52.79%), Query Frame = 3
Query:  240 GRHLARRLVEIGAKDVFSVPGDFNLTLLDHL----IAEPELNLVGCCNELNAGYAADGYAR-SRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYG----TNRILHHTI---------GLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYI---------SISC-NLPGIP 746
            G ++ +RL+ I  K VF VPGDFNL+LL++L    +    L  VG CNELNA YAADGY+R S  +G  + T+ VG LS LN IAG+++EN+ V+ IVG   S D      ++R LHH +         G             + CS A + ++  A + +D  I    K SKP YI         S++C NL  +P
Sbjct:   28 GEYIFKRLLSIDTKSVFGVPGDFNLSLLEYLYSPSVESAGLRWVGTCNELNAAYAADGYSRYSNKIGCLITTYGVGELSALNGIAGSFAENVKVLHIVGVAKSIDSRSSNFSDRNLHHLVPQLHDSNFKGPNHKVYHDMVKDRVACSVAYLEDIETACDQVDNVIRDIYKYSKPGYIFVPADFADMSVTCDNLVNVP 224          
The following BLAST results are available for this feature:
BLAST of CN184740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
PDC_ASPFU1.392e-3244.58Pyruvate decarboxylase OS=Aspergillus fumigatus GN... [more]
PDC1_CANGA3.101e-3240.64Pyruvate decarboxylase OS=Candida glabrata GN=PDC1... [more]
PDC5_YEAST4.051e-3240.11Pyruvate decarboxylase isozyme 2 OS=Saccharomyces ... [more]
PDC4_SCHPO4.051e-3243.90Putative pyruvate decarboxylase C3G9.11c OS=Schizo... [more]
PDC_HANUV2.010e-3142.20Pyruvate decarboxylase OS=Hanseniaspora uvarum GN=... [more]
PDC_ASPPA2.010e-3140.20Pyruvate decarboxylase OS=Aspergillus parasiticus ... [more]
PDC1_YEAST2.010e-3139.57Pyruvate decarboxylase isozyme 1 OS=Saccharomyces ... [more]
PDC6_YEAST9.977e-3139.04Pyruvate decarboxylase isozyme 3 OS=Saccharomyces ... [more]
THI3_YEAST5.665e-2636.53Thiamine metabolism regulatory protein THI3 OS=Sac... [more]
ARO10_YEAST6.925e-2438.07Transaminated amino acid decarboxylase OS=Saccharo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006A05_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184740 ID=CN184740; Name=CN184740; organism=Citrus sinensis; type=EST; length=846bp
GAGGAGAAACCAGCCCACAGTTCACGAAGACCCAACCAATCACAGATTCA
CAATAGACAATACTCCTATAATAACAGCCCCCACTTGCGCCATCGGTGGA
ACATAAGAAATTGAAAACAGCTTCGTTCTTGTTATACAATATACGCTTAC
ACATGGACACTGCAAACGCAATGGGCTCAACGGGTCAACCCGGCTCAGCT
CCAGCTCCAGTCCGCGGCGGGGCCTCCGTCGGCACGCTAGGCCGGCACCT
GGCGCGGCGGCTGGTGGAGATCGGCGCGAAGGATGTCTTCTCGGTTCCGG
GAGACTTTAACTTGACGCTCTTGGATCATCTCATAGCGGAGCCGGAGTTA
AACTTGGTCGGCTGCTGCAACGAGCTGAACGCCGGATACGCCGCCGACGG
CTACGCACGCTCCAGAGGCGTGGGGGCCTGTGTGGTGACGTTCACTGTGG
GTGGCCTTAGCGTCTTGAACGCCATTGCTGGCGCTTACAGTGAGAATTTG
CCCGTTATCTGTATCGTCGGCGGCCCTAATTCTAATGATTATGGGACTAA
CAGGATCTTGCATCATACCATTGGCTTGCCTGATTTCACCCAAGAACTTA
GATGCTTCCAGGCTATCACCTGTTCTCAGGCTGTGGTGAATAATCTGGGC
GATGCACATGAGCTCATTGACACAGCAATCTCTACTGCTTTGAAGGAAAG
CAAACCGGTTTATATCAGTATAAGCTGTAATTTGCCTGGAATTCCTCATC
CCACATTTGCTAGGGACCCCGTCCCCTTCTTTCTTGCTCCTAAGGTAAGC
CATCAATTAGGATTAGAAGCAGCCGTGGAAGCGACTGCTGATTTTT
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