CN184734

Overview
NameCN184734
Unique NameCN184734
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length672
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184734 vs. ExPASy Swiss-Prot
Match: PPIL3_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Cryptococcus neoformans GN=CYP10 PE=3 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 6.751e-23
Identity = 61/123 (49.59%), Postives = 80/123 (65.04%), Query Frame = -3
Query:  302 PRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTARNGTGGESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEK 667
            PRTAENF ALC        SG+   Y G+ FHR I GFM QGGD T   G GG+SI+G  F+DE     +    G+++MANAGP TN SQFF+  AK   LDGK+ +FG+V++GM+ + ++EK
Sbjct:   22 PRTAENFLALCA-------SGQ---YDGTLFHRNIRGFMIQGGDPTG-TGKGGQSIWGRPFSDEIRQTLRFNNRGMVAMANAGPDTNKSQFFITYAKQPSLDGKYSIFGKVIDGMETLDSMEK 133          
BLAST of CN184734 vs. ExPASy Swiss-Prot
Match: PPIL2_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Cryptococcus neoformans GN=CYP8 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.504e-22
Identity = 64/131 (48.85%), Postives = 76/131 (58.02%), Query Frame = -3
Query:  284 PRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTARNGTGGESIYGSKFADENFVK---KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSG 667
            P+T  NF  L        K+GK   Y    FHR+IPGFM QGGD T   G GGES +G  F DE+  K   KH   G+LSMAN+GP TNGSQFF     T  LDGKH VFG++V G + +  IE+V    G
Sbjct:  335 PKTVYNFVQLA-------KAGK---YDNVVFHRLIPGFMVQGGDPTG-TGRGGESYWGEPFRDEHGEKGAYKHDSRGVLSMANSGPRTNGSQFFFTFRPTPHLDGKHTVFGKLVGGEETLDKIERVNVRPG 454          
BLAST of CN184734 vs. ExPASy Swiss-Prot
Match: PPIB_STRCH (Peptidyl-prolyl cis-trans isomerase B OS=Streptomyces chrysomallus GN=cypB PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.964e-22
Identity = 67/142 (47.18%), Postives = 84/142 (59.15%), Query Frame = -3
Query:  266 PRTAENFRALCTGEKG-----IGKSGKPLHYKGSSFHRVIPGFMCQGGDFTARNGTGGESIYGSKFADENFVKK-HTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQV--VEGMDVVKAIEKVGSSSGRTNKPV 667
            P+T  NF  L TG++       G+      Y G+ FHRVI GFM QGGD    NGTGG    G KFADE   +   T P +L+MANAGPGTNGSQFF+  + T WL GKH +FG+V    G  VV AI     ++ RT++P+
Sbjct:   26 PKTVRNFVELATGQREWVNPETGEKSTDRLYDGTVFHRVISGFMIQGGD-PLGNGTGGP---GYKFADEFHPELGFTQPYLLAMANAGPGTNGSQFFLTVSPTAWLTGKHTIFGEVSGEAGRKVVDAIAAT-PTNPRTDRPL 162          
BLAST of CN184734 vs. ExPASy Swiss-Prot
Match: PPIL3_CHICK (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gallus gallus GN=PPIL3 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.566e-22
Identity = 58/125 (46.40%), Postives = 75/125 (60.00%), Query Frame = -3
Query:  299 TPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTARNGTGGESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKV 670
            TP+T ENF ALC             +Y G  FHR I GFM Q GD     G GG SI+G KF DE +   KH+  G++SMAN GP TNGSQFF+   K   LD K+ VFG+V++G++ +  +EK+
Sbjct:   21 TPKTCENFLALCASN----------YYNGCVFHRNIKGFMVQTGD-PLGTGKGGTSIWGKKFEDEFSEYLKHSVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKL 134          
BLAST of CN184734 vs. ExPASy Swiss-Prot
Match: PPIL3_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Mus musculus GN=Ppil3 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.351e-22
Identity = 58/125 (46.40%), Postives = 74/125 (59.20%), Query Frame = -3
Query:  299 TPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTARNGTGGESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKV 670
            TP+T ENF ALC             +Y G  FHR I GFM Q GD T   G GG SI+  KF DE +   KH   G++SMAN GP TNGSQFF+   K   LD K+ VFG+V++G++ +  +EK+
Sbjct:   21 TPKTCENFLALCASN----------YYNGCVFHRNIKGFMVQTGDPTG-TGRGGSSIWAKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKL 134          
BLAST of CN184734 vs. ExPASy Swiss-Prot
Match: PPIL2_ARATH (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Arabidopsis thaliana GN=PUB49 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.465e-22
Identity = 62/124 (50.00%), Postives = 74/124 (59.68%), Query Frame = -3
Query:  299 PRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTARNGTGGESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKV 667
            PR  ENF  LC  E+G        +Y G +FHR I  FM QGGD T   G GGESI+G  F DE N    H+G G++SMAN+GP TNGSQFFV       L+ KH VFG VV G+  + A+E V
Sbjct:  365 PRACENFITLC--ERG--------YYNGVAFHRSIRNFMIQGGDPTG-TGKGGESIWGKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFGGVVGGLATLAAMENV 477          
BLAST of CN184734 vs. ExPASy Swiss-Prot
Match: PPIL3_RHIOR (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rhizopus oryzae GN=cyp4 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.273e-21
Identity = 65/131 (49.62%), Postives = 79/131 (60.31%), Query Frame = -3
Query:  299 PRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQ------GGDFTARNGTGGESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMD-VVKAIEKV 667
            P+TAENF ALC        SG   +Y  ++FHR IPGFM Q       GD T   G GG SI+G KF DE     KH   GI+SMAN+GP TNGSQFF+  AK   LD K+ VFG+V++G D  +  +EKV
Sbjct:   22 PKTAENFLALCA-------SG---YYDNNTFHRNIPGFMIQVHEHLHTGDPTG-TGKGGNSIWGKKFNDEIRSTLKHNSRGIVSMANSGPNTNGSQFFITYAKHPHLDTKYTVFGKVIDGADSTLDMMEKV 141          
BLAST of CN184734 vs. ExPASy Swiss-Prot
Match: CYP9_SCHPO (Peptidyl-prolyl cis-trans isomerase 9 OS=Schizosaccharomyces pombe GN=cyp9 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.837e-21
Identity = 55/109 (50.46%), Postives = 68/109 (62.39%), Query Frame = -3
Query:  272 HYKGSSFHRVIPGFMCQGGDFTARNGTGGESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNK 595
            +Y  + FHR+I  FM QGGD    +GTGGESI+   F DE     KH  P  +SMAN+GP TNGSQFF+ T  T WLDGKH +F +   G+DVV  IE+     G T+K
Sbjct:  490 YYDNTIFHRIIKNFMIQGGD-PLGDGTGGESIWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGLDVVHRIEQ-----GETDK 592          
BLAST of CN184734 vs. ExPASy Swiss-Prot
Match: PPIA_MYCTU (Probable peptidyl-prolyl cis-trans isomerase A OS=Mycobacterium tuberculosis GN=ppiA PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.319e-21
Identity = 68/145 (46.90%), Postives = 83/145 (57.24%), Query Frame = -3
Query:  260 PRTAENFRALCTGEKGIGK---SGKPL--HYKGSSFHRVIPGFMCQGGDFTARNGTGGESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVV--EGMDVVKAIEKVGS-SSGRTNKPVVI 667
            P+T  NF  L  G K       SG P    Y G+ FHRVI GFM QGGD T   G GG    G KFADE   + +   P +L+MANAGPGTNGSQFF+   KT  L+ +H +FG+V+  E   VV+AI K  +  + R   PVVI
Sbjct:   36 PKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTG-TGRGGP---GYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVI 176          
BLAST of CN184734 vs. ExPASy Swiss-Prot
Match: PPIA_MYCBO (Probable peptidyl-prolyl cis-trans isomerase A OS=Mycobacterium bovis GN=ppiA PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.319e-21
Identity = 68/145 (46.90%), Postives = 83/145 (57.24%), Query Frame = -3
Query:  260 PRTAENFRALCTGEKGIGK---SGKPL--HYKGSSFHRVIPGFMCQGGDFTARNGTGGESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVV--EGMDVVKAIEKVGS-SSGRTNKPVVI 667
            P+T  NF  L  G K       SG P    Y G+ FHRVI GFM QGGD T   G GG    G KFADE   + +   P +L+MANAGPGTNGSQFF+   KT  L+ +H +FG+V+  E   VV+AI K  +  + R   PVVI
Sbjct:   36 PKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTG-TGRGGP---GYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVI 176          
The following BLAST results are available for this feature:
BLAST of CN184734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 247
Match NameE-valueIdentityDescription
PPIL3_CRYNE6.751e-2349.59Peptidyl-prolyl cis-trans isomerase-like 3 OS=Cryp... [more]
PPIL2_CRYNE1.504e-2248.85Peptidyl-prolyl cis-trans isomerase-like 2 OS=Cryp... [more]
PPIB_STRCH1.964e-2247.18Peptidyl-prolyl cis-trans isomerase B OS=Streptomy... [more]
PPIL3_CHICK2.566e-2246.40Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gall... [more]
PPIL3_MOUSE3.351e-2246.40Peptidyl-prolyl cis-trans isomerase-like 3 OS=Mus ... [more]
PPIL2_ARATH7.465e-2250.00Peptidyl-prolyl cis-trans isomerase-like 2 OS=Arab... [more]
PPIL3_RHIOR1.273e-2149.62Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rhiz... [more]
CYP9_SCHPO2.837e-2150.46Peptidyl-prolyl cis-trans isomerase 9 OS=Schizosac... [more]
PPIA_MYCTU6.319e-2146.90Probable peptidyl-prolyl cis-trans isomerase A OS=... [more]
PPIA_MYCBO6.319e-2146.90Probable peptidyl-prolyl cis-trans isomerase A OS=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005P24_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005P24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184734 ID=CN184734; Name=CN184734; organism=Citrus sinensis; type=EST; length=672bp
GAGGCAAGACAAGCCCTATCTTATTTAAAAAGGCAGCTCATAGAAAGACA
TAAAAAACAGTTCATCAAGAACCACCACCGGAGACCCGATCCAACCCGAA
CAAGTAACATAGCAGGAAAATTAGATAAAGATTAAAAGTCCTACAGACAC
GGCCACATAATAATAGATAACATAATCACCATCACGATCGCGATCAGACG
GCTCGTGATGATGGCGATCATTATCATGATCAAATCTAAGACAATTGACC
GCAATCAGCGATCACGACGGGCTTGTTGGTCCTTCCGGAGCTGGACCCCA
CTTTCTCGATGGCCTTGACGACGTCCATTCCTTCGACGACTTGACCGAAC
ACAACGTGCTTCCCATCGAGCCACTCGGTCTTGGCCGTACAGACGAAGAA
CTGAGATCCGTTGGTTCCGGGTCCGGCATTCGCCATGGAGAGGATTCCGG
GGCCGGTGTGCTTCTTCACGAAGTTCTCATCGGCGAATTTTGAGCCGTAG
ATTGATTCGCCTCCGGTTCCGTTTCGGGCGGTGAAGTCTCCCCCCTGGCA
CATGAATCCGGGGATCACACGGTGGAAGGACGAGCCCTTGTAGTGGAGTG
GCTTGCCGGACTTGCCGATGCCTTTCTCGCCGGTGCAGAGGGCGCGGAAG
TTCTCGGCGGTTCGGGGGGTGA
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