CN184715

Overview
NameCN184715
Unique NameCN184715
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length586
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig600 contig Csv1_Contig600:198..783. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184715 vs. ExPASy Swiss-Prot
Match: XTH7_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 1.840e-36
Identity = 67/145 (46.21%), Postives = 89/145 (61.38%), Query Frame = -1
Query:  149 YSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFIASYKGFDIDACECPASVAGADNAKKCSSSAEKRFWWDEPTLSELNVHQSHQLMWVRANHLIYDYCTDTSRFPAIPTEC 583
            Y++ WN  ++VF VD  PIRV+ N E + +P+P+ Q MGVYS++W ADDWAT+GG  K +WS APF A YK FDI+ C  P       N+K          WW+     +L+  ++    WVR NH++YDYCTD SRFP  P EC
Sbjct:  154 YAISWNHLRIVFYVDNVPIRVYKNNEARKVPYPRFQPMGVYSTLWEADDWATRGGIEKINWSRAPFYAYYKDFDIEGCPVPGPADCPANSKN---------WWEGSAYHQLSPVEARSYRWVRVNHMVYDYCTDKSRFPVPPPEC 289          
BLAST of CN184715 vs. ExPASy Swiss-Prot
Match: XTH16_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 3.471e-35
Identity = 70/147 (47.62%), Postives = 92/147 (62.59%), Query Frame = -1
Query:  149 TYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFIASYKGFDIDACECPASVAGADNAKKCSSSAEKRFWWDEPTLSELNVHQSHQLMWVRANHLIYDYCTDTSRFP-AIPTEC 586
            TYSL+W  + ++F+VD  PIRV  N E  G+PFPK+Q M +YSS+WNADDWAT+GG VKTDWS APF A Y+GF+  AC   +  +  D   K S +       +    +ELN +   +L WV+   +IYDYC+D  RFP   P EC
Sbjct:  145 TYSLVWRPQHIIFMVDNVPIRVFNNAEQLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRGFNAAACTVSSGSSFCDPKFKSSFTN-----GESQVANELNAYGRRRLRWVQKYFMIYDYCSDLKRFPQGFPPEC 286          
BLAST of CN184715 vs. ExPASy Swiss-Prot
Match: XTH13_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 13 OS=Arabidopsis thaliana GN=XTH13 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 3.471e-35
Identity = 72/148 (48.65%), Postives = 97/148 (65.54%), Query Frame = -1
Query:  149 TYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFIASYKGF-DIDACECPASVAGADNAKKCSSSAEKRFWWDEPTLSELNVHQSHQLMWVRANHLIYDYCTDTSRFP-AIPTEC 586
            TY++LWN   ++FLVD  PIRV  N E  G+ +PK Q M +YSS+W ADDWATQGG+VKTDW++APF ASYK F D+D C    S     N   C++++    W      + LN +Q  Q+ WV+ +++IY+YCTD  RFP  +PTEC
Sbjct:  144 TYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEADDWATQGGKVKTDWTNAPFSASYKSFNDVDCC----SRTSLLNWVTCNANSNSWMW------TTLNSNQYGQMKWVQDDYMIYNYCTDFKRFPQGLPTEC 281          
BLAST of CN184715 vs. ExPASy Swiss-Prot
Match: XTH12_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 12 OS=Arabidopsis thaliana GN=XTH12 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 3.471e-35
Identity = 72/148 (48.65%), Postives = 97/148 (65.54%), Query Frame = -1
Query:  149 TYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFIASYKGF-DIDACECPASVAGADNAKKCSSSAEKRFWWDEPTLSELNVHQSHQLMWVRANHLIYDYCTDTSRFP-AIPTEC 586
            TY++LWN   ++FLVD  PIRV  N E  G+ +PK Q M +YSS+W ADDWATQGG+VKTDW++APF ASY+ F D+D C    S     N   C++++    W      + LN +Q  QL WV+ +++IY+YCTD  RFP  +PTEC
Sbjct:  145 TYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEADDWATQGGKVKTDWTNAPFSASYRSFNDVDCC----SRTSIWNWVTCNANSNSWMW------TTLNSNQLGQLKWVQKDYMIYNYCTDFKRFPQGLPTEC 282          
BLAST of CN184715 vs. ExPASy Swiss-Prot
Match: XTH23_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana GN=XTH23 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.010e-34
Identity = 69/148 (46.62%), Postives = 96/148 (64.86%), Query Frame = -1
Query:  146 TYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFIASYKGFDIDACECPASVAGADNAKKCSSSAEKRFWWDEPTLSELNVHQSHQLMWVRANHLIYDYCTDTSRFP-AIPTECV 586
            TYS+LWN ++++F VD TPIR   N+E +G  FPK+Q M +YSS+WNA++WAT+GG VKTDWS APF ASY+GF+ +AC     + G  +    S       W  +    EL+     Q+ WV+ N++IY+YCTD  RFP  +P EC+
Sbjct:  144 TYSILWNPQRIIFSVDGTPIREFKNMESQGTLFPKNQPMRMYSSLWNAEEWATRGGLVKTDWSKAPFTASYRGFNEEAC---VVINGQSSCPNVSGQGSTGSWLSQ----ELDSTGQEQMRWVQNNYMIYNYCTDAKRFPQGLPRECL 284          
BLAST of CN184715 vs. ExPASy Swiss-Prot
Match: XTH1_SOLLC (Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum GN=XTH1 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.010e-34
Identity = 65/150 (43.33%), Postives = 92/150 (61.33%), Query Frame = -1
Query:  137 TYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFIASYKGFDIDACECPASVAGADNAKKCSSSAEKRFWWDEPTLSELNVHQSHQLMWVRANHLIYDYCTDTSRFPAIPTECVHHR 586
            +YS+LWN   +V  VD+ PIR   N +  G+ FP +Q M +YSS+W+ADDWAT+GG  KT+W++APF ASY  F +D CE     A     + C++   K  WWD+    +L+  Q  +L WVR  + +Y+YCTD +R+P  P EC   R
Sbjct:  151 SYSVLWNTYLIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTNWANAPFTASYTSFHVDGCE----AATPQEVQVCNTKGMK--WWDQKAFQDLDALQYRRLRWVRQKYTVYNYCTDKARYPVPPPECTKDR 294          
BLAST of CN184715 vs. ExPASy Swiss-Prot
Match: XTH22_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.723e-34
Identity = 69/148 (46.62%), Postives = 96/148 (64.86%), Query Frame = -1
Query:  146 TYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFIASYKGFDIDACECPASVAGADNAKKCSSSAEKRFWWDEPTLSELNVHQSHQLMWVRANHLIYDYCTDTSRFP-AIPTECV 586
            TY++LWN ++++F VD TPIR   N+E  G  FPK++ M +YSS+WNADDWAT+GG VKTDWS APF ASY+GF  +AC      +   NA K  ++     W  +    EL+     ++ WV+ N++IY+YCTD  RFP  +P EC+
Sbjct:  141 TYTILWNPQRIIFTVDGTPIREFKNMESLGTLFPKNKPMRMYSSLWNADDWATRGGLVKTDWSKAPFTASYRGFQQEACVWSNGKSSCPNASKQGTTTGS--WLSQ----ELDSTAQQRMRWVQRNYMIYNYCTDAKRFPQGLPKECL 282          
BLAST of CN184715 vs. ExPASy Swiss-Prot
Match: XTH15_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana GN=XTH15 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.838e-34
Identity = 72/151 (47.68%), Postives = 92/151 (60.93%), Query Frame = -1
Query:  137 TYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFIASYKGFDIDACECPASVAGADNAKKCSSSAEKRFWWDEPTLSELNVHQSHQLMWVRANHLIYDYCTDTSRFP-AIPTECVHHR 586
            TYS++W  + ++FLVD  PIRV  N E  G+PFPK Q M +YSS+WNADDWAT+GG VKTDWS APF A Y+GF+  AC    + +G D   K S    K         +ELN +   +L WV+   +IY+YC+D  RFP   P EC   R
Sbjct:  146 TYSIVWRPQHIIFLVDNLPIRVFNNAEKLGVPFPKSQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRGFNAAAC---TASSGCDPKFKSSFGDGKL-----QVATELNAYGRRRLRWVQKYFMIYNYCSDLKRFPRGFPPECKKSR 288          
BLAST of CN184715 vs. ExPASy Swiss-Prot
Match: XTH25_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 2.106e-32
Identity = 68/149 (45.64%), Postives = 91/149 (61.07%), Query Frame = -1
Query:  143 TYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFIASYKGFDIDACECPASVAGADNAKKCSSSAEKRFWWDEPTLSELNVHQSHQLMWVRANHLIYDYCTDTSRFP-AIPTECVH 586
            TYS+LWN   +VF+VD+ P+R   NL+H GI +PK Q M +YSS+WNAD WAT+GG VKTDWS APF ASY+ F  DAC          +  + S  A    W+ +     L++    ++  V+  ++IY+YCTDT RFP   P EC H
Sbjct:  148 TYSVLWNPHHIVFMVDDIPVREFKNLQHMGIQYPKLQPMRLYSSLWNADQWATRGGLVKTDWSKAPFTASYRNFRADAC--------VSSGGRSSCPAGSPRWFSQ----RLDLTAEDKMRVVQRKYMIYNYCTDTKRFPQGFPKECRH 284          
BLAST of CN184715 vs. ExPASy Swiss-Prot
Match: XTH26_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 26 OS=Arabidopsis thaliana GN=XTH26 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.750e-32
Identity = 65/146 (44.52%), Postives = 91/146 (62.33%), Query Frame = -1
Query:  149 YSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFIASYKGFDIDACECPASVAGADNAKKCSSSAEKRFWWDEPTLSELNVHQSHQLMWVRANHLIYDYCTDTSRFPAI-PTEC 583
            Y++ WN  +VV+ VD TPIRV  N E +GI +P  Q M V++S+WNA+DWATQGGRVKT+W+ APF+A  + +   AC    SV    + K+C     +  WW  P+ S+L   Q  ++  +R   +IYDYC DT+RF  + P EC
Sbjct:  146 YTIHWNPSEVVWFVDGTPIRVFRNYESEGIAYPNKQGMKVFASLWNAEDWATQGGRVKTNWTLAPFVAEGRRYKARACLWKGSV----SIKQCVDPTIRSNWWTSPSFSQLTASQLTKMQKIRDGFMIYDYCKDTNRFKGVMPPEC 287          
The following BLAST results are available for this feature:
BLAST of CN184715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
XTH7_ARATH1.840e-3646.21Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH16_ARATH3.471e-3547.62Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH13_ARATH3.471e-3548.65Putative xyloglucan endotransglucosylase/hydrolase... [more]
XTH12_ARATH3.471e-3548.65Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH23_ARATH1.010e-3446.62Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH1_SOLLC1.010e-3443.33Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH22_ARATH1.723e-3446.62Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH15_ARATH3.838e-3447.68Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH25_ARATH2.106e-3245.64Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH26_ARATH2.750e-3244.52Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005P07_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005P07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184715 ID=CN184715; Name=CN184715; organism=Citrus sinensis; type=EST; length=586bp
CCCCGGGCTGCAGGAAAAACATGGAGTACATGTTATGATCGATCTTTTTC
CACCCCGCCCTTTTTTTTTCAACTTTTTTACATAAGAAACGCAAATCCTT
TTTCCTTCAGTCATTCACAATCATTCATGGCTAGTGGCGGTGGTGCACGC
ACTCGGTGGGAATAGCTGGGAACCTAGACGTGTCAGTGCAATAGTCATAG
ATGAGGTGATTGGCTCTAACCCACATGAGCTGGTGGCTTTGGTGCACATT
GAGCTCAGACAATGTTGGCTCATCCCACCAGAACCTTTTCTCAGCACTGC
TGCTGCATTTTTTGGCATTATCGGCACCTGCAACCGACGCTGGGCACTCG
CATGCATCAATATCAAAGCCCTTGTATGATGCAATAAAAGGTGCATGGCT
CCAGTCAGTCTTGACCCTTCCCCCCTGTGTGGCCCAGTCATCAGCATTCC
ATATTGAACTGTACACACCCATGGCTTGGTCCTTTGGGAAGGGAATTCCT
TTGTGCTCCAAGTTAGTGTGCACTCTAATTGGGGTCTCATCCACCAAAAA
TACAACTTGGCGCTGGTTCCAAAGGAGGGAATAGGT
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