CN184708
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184708 vs. ExPASy Swiss-Prot
Match: NLTP1_HELAN (Non-specific lipid-transfer protein AP10 OS=Helianthus annuus PE=1 SV=2) HSP 1 Score: 50.8322 bits (120), Expect = 6.699e-13 Identity = 22/62 (35.48%), Postives = 38/62 (61.29%), Query Frame = -2 Query: 177 AGVRSLNGAARTTPVRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 362 AG + L GA RT R+ AC C K A ++ ++P++A+ LP +CG+ I+P+ +C+ + Sbjct: 55 AGAKKLLGATRTQADRRTACKCAKTAAPQLK-VRPDMASSLPGKCGISTSIPINPNVNCNTI 115 HSP 2 Score: 42.3578 bits (98), Expect = 6.699e-13 Identity = 16/29 (55.17%), Postives = 22/29 (75.86%), Query Frame = -1 Query: 358 CGQVTPSLAPCIPFLRTGGRFPPPPCCSG 444 C VT +L PC+P+LR+GG+ P P CC+G Sbjct: 29 CNDVTGNLTPCLPYLRSGGK-PTPACCAG 56
BLAST of CN184708 vs. ExPASy Swiss-Prot
Match: NLTP1_ARATH (Non-specific lipid-transfer protein 1 OS=Arabidopsis thaliana GN=LTP1 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 7.070e-13 Identity = 40/85 (47.06%), Postives = 53/85 (62.35%), Query Frame = -2 Query: 174 LHASLS*ELEGVFLHRHAVAGVRSLNGAARTTPVRQAACNCLK---RAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 419 L A + L+G + +GV++LN A+TTP RQ ACNC++ RA G+ G+ AAG+P CGV IPYKIS ST+C VR Sbjct: 36 LAACIGYVLQGGVIPPACCSGVKNLNSIAKTTPDRQQACNCIQGAARALGS--GLNAGRAAGIPKACGVNIPYKISTSTNCKTVR 118
BLAST of CN184708 vs. ExPASy Swiss-Prot
Match: NLTPA_RICCO (Non-specific lipid-transfer protein A OS=Ricinus communis PE=1 SV=1) HSP 1 Score: 52.373 bits (124), Expect = 1.155e-12 Identity = 26/62 (41.94%), Postives = 37/62 (59.68%), Query Frame = -2 Query: 177 AGVRSLNGAARTTPVRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 362 AGV++L A T+ R+AAC C+K A IK + A+ LP +CGV I IS +T+C + Sbjct: 30 AGVQNLKTLAPTSADRRAACECIKAAAARFPTIKQDAASSLPKKCGVDINIPISKTTNCQAI 91 HSP 2 Score: 40.0466 bits (92), Expect = 1.155e-12 Identity = 18/31 (58.06%), Postives = 19/31 (61.29%), Query Frame = -1 Query: 352 CGQVTPSLAPCIPFLRTGGRFPPPPCCSGRQ 444 CGQV SLA CIPFL G P CC+G Q Sbjct: 3 CGQVNSSLASCIPFLTGGVASPSASCCAGVQ 33
BLAST of CN184708 vs. ExPASy Swiss-Prot
Match: NLTPB_ARATH (Non-specific lipid-transfer protein 11 OS=Arabidopsis thaliana GN=LTP11 PE=2 SV=1) HSP 1 Score: 54.6842 bits (130), Expect = 3.202e-12 Identity = 27/61 (44.26%), Postives = 34/61 (55.74%), Query Frame = -2 Query: 177 GVRSLNGAARTTPVRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 359 G+ SL AA RQ ACNCLK TI GI + A LP++CGV I S + DC+ + Sbjct: 58 GLNSLKAAAPEKADRQVACNCLKSVANTIPGINDDFAKQLPAKCGVNIGVPFSKTVDCNSI 118 HSP 2 Score: 36.1946 bits (82), Expect = 3.202e-12 Identity = 15/29 (51.72%), Postives = 19/29 (65.52%), Query Frame = -1 Query: 358 CGQVTPSLAPCIPFLRTGGRFPPPPCCSG 444 C QV LA C+P+L+ GG P P CC+G Sbjct: 31 CPQVNMYLAQCLPYLKAGGN-PSPMCCNG 58
BLAST of CN184708 vs. ExPASy Swiss-Prot
Match: NLTP2_ARATH (Non-specific lipid-transfer protein 2 OS=Arabidopsis thaliana GN=LTP2 PE=2 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 1.538e-11 Identity = 34/63 (53.97%), Postives = 40/63 (63.49%), Query Frame = -2 Query: 174 GVRSLNGAARTTPVRQAACNCLKRAYGTIR-GIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 359 GV +L A TTP RQ AC CL+ A + G+ AAGLPS C V IPYKIS ST+C+ VR Sbjct: 56 GVTNLKNMASTTPDRQQACRCLQSAAKAVGPGLNTARAAGLPSACKVNIPYKISASTNCNTVR 118 HSP 2 Score: 25.0238 bits (53), Expect = 1.538e-11 Identity = 12/29 (41.38%), Postives = 15/29 (51.72%), Query Frame = -1 Query: 358 CGQVTPSLAPCIPFLRTGGRFPPPPCCSG 444 CG V +LA CI +L G CC+G Sbjct: 29 CGTVNGNLAGCIAYLTRGAPL-TQGCCNG 56
BLAST of CN184708 vs. ExPASy Swiss-Prot
Match: NLTP1_WHEAT (Non-specific lipid-transfer protein (Fragment) OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 59.6918 bits (143), Expect = 4.439e-11 Identity = 28/61 (45.90%), Postives = 39/61 (63.93%), Query Frame = -2 Query: 177 GVRSLNGAARTTPVRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 359 GV++L+ AR+ RQ+ACNCLK I + + A +P +CGV +PY IS + DCSRV Sbjct: 53 GVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSRV 113 HSP 2 Score: 27.335 bits (59), Expect = 4.439e-11 Identity = 11/29 (37.93%), Postives = 16/29 (55.17%), Query Frame = -1 Query: 358 CGQVTPSLAPCIPFLRTGGRFPPPPCCSG 444 CG V + PC+ +++ GG P CC G Sbjct: 26 CGHVDSLVRPCLSYVQ-GGPGPSGQCCDG 53
BLAST of CN184708 vs. ExPASy Swiss-Prot
Match: NLTP7_ARATH (Non-specific lipid-transfer protein 7 OS=Arabidopsis thaliana GN=LTP7 PE=2 SV=1) HSP 1 Score: 51.9878 bits (123), Expect = 9.530e-11 Identity = 27/62 (43.55%), Postives = 39/62 (62.90%), Query Frame = -2 Query: 183 GVRSLNGAARTTPVRQAACNCLKRAYGTI-RGIKPNVAAGLPSQCGVRIPY--KISPSTDCS 359 GVR LNG TT R+ AC C+K A + G+ + AAG+P +CG++IPY +I +T C+ Sbjct: 58 GVRKLNGMVLTTLDRRQACRCIKNAARNVGPGLNADRAAGIPRRCGIKIPYSTQIRFNTKCN 119 HSP 2 Score: 33.8834 bits (76), Expect = 9.530e-11 Identity = 14/30 (46.67%), Postives = 18/30 (60.00%), Query Frame = -1 Query: 358 CGQVTPSLAPCIPFLRTGG-RFPPPPCCSG 444 CG+V +L PC +L GG P P CC+G Sbjct: 29 CGEVNSNLKPCTGYLTNGGITSPGPQCCNG 58 The following BLAST results are available for this feature:
BLAST of CN184708 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184708 ID=CN184708; Name=CN184708; organism=Citrus sinensis; type=EST; length=444bpback to top |