CN184703
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184703 vs. ExPASy Swiss-Prot
Match: EXP11_ARATH (Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.663e-49 Identity = 87/130 (66.92%), Postives = 104/130 (80.00%), Query Frame = 2 Query: 8 ALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 397 AL N+NGGWCNPPL+HFDMA+PA+ +I YR GIVP+ F+R+ C KKGG+RF +NG YF LV I NVGGAG + SVSIKGSKTGW AMSRNWG NWQSN+YL+GQ+LSF +T +DG T NVVP +W Sbjct: 111 ALPNNNGGWCNPPLKHFDMAQPAWEKIGIYRGGIVPVVFQRVSCYKKGGVRFRINGRDYFELVNIQNVGGAGSIKSVSIKGSKTGWLAMSRNWGANWQSNAYLDGQALSFSITTTDGATRVFLNVVPSSW 240
BLAST of CN184703 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 4.543e-49 Identity = 85/124 (68.55%), Postives = 104/124 (83.87%), Query Frame = 2 Query: 26 GGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 397 GG C+PP HFD+++P + +IA Y++GI+P+ +RR+ C + GGIRFT+NGHSYFNLVL+TNVGGAGDVHSVS+KGS+T WQ MSRNWGQNWQSNSYLNGQSLSF +T SD R+V S NV P W Sbjct: 119 GGACDPPNHHFDLSQPIYEKIALYKSGIIPVMYRRVRCKRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVSMKGSRTKWQLMSRNWGQNWQSNSYLNGQSLSFVVTTSDRRSVVSFNVAPPTW 242
BLAST of CN184703 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 5.933e-49 Identity = 86/130 (66.15%), Postives = 105/130 (80.77%), Query Frame = 2 Query: 8 ALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 397 ALS D GGWCNPP +HFDM++PA+ IA YRAGIVP+++RR+PC + GGIRF VNGHSYF LVL+TNVGG+G V + IKGS TGW AMSRNWG NWQSN+ L+GQ+LSF++ A DGR VT+ +V P W Sbjct: 109 ALSGDAGGWCNPPRRHFDMSQPAWETIAVYRAGIVPVNYRRVPCQRSGGIRFAVNGHSYFELVLVTNVGGSGAVAQMWIKGSGTGWMAMSRNWGANWQSNARLDGQALSFRVQADDGRVVTAADVAPAGW 238
BLAST of CN184703 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2) HSP 1 Score: 191.43 bits (485), Expect = 3.846e-48 Identity = 83/130 (63.85%), Postives = 104/130 (80.00%), Query Frame = 2 Query: 8 ALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 397 AL +++GGWCNPP QHFDM++PA+ IA Y+AGIVP++++R+PC + GGIRF ++GH YF LV +TNVGG+G V +SIKGS TGW AMSRNWG NWQSN+YL GQSLSF + DGR VT+ NV P NW Sbjct: 113 ALPSNSGGWCNPPRQHFDMSQPAWENIAVYQAGIVPVNYKRVPCQRSGGIRFAISGHDYFELVTVTNVGGSGVVAQMSIKGSNTGWMAMSRNWGANWQSNAYLAGQSLSFIVQLDDGRKVTAWNVAPSNW 242
BLAST of CN184703 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 5.023e-48 Identity = 82/128 (64.06%), Postives = 104/128 (81.25%), Query Frame = 2 Query: 14 SNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 397 SND GGWCNPP QHFDMA+PA+ QI YR GIVP++F+R+ C +KGG+RFT+NG+SYF LVLITNVGG G + SV IKG+KTGW MSRNWG NWQ+N+YLN Q++SF +T++ G+T+ +V P NW Sbjct: 111 SND-GGWCNPPRQHFDMAQPAWEQIGVYRGGIVPVNFQRVSCTRKGGVRFTINGNSYFELVLITNVGGPGSIKSVQIKGTKTGWVTMSRNWGANWQANNYLNNQAISFSVTSTAGKTLVFEDVAPSNW 237
BLAST of CN184703 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 4.252e-47 Identity = 83/130 (63.85%), Postives = 101/130 (77.69%), Query Frame = 2 Query: 8 ALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 397 A +D GGWCNPP +HFDM++PA+ IA Y+AGIVP++F+R+PC K GGIRFT++G YF LV + NVGG+G V VSIKGSKT W AMSRNWGQNWQSN+YLN QSLSF++ D R VT N+ P NW Sbjct: 107 AKKSDAGGWCNPPRKHFDMSQPAWTSIAIYQAGIVPVNFKRVPCQKSGGIRFTISGRDYFELVTVFNVGGSGVVAQVSIKGSKTDWMAMSRNWGQNWQSNAYLNTQSLSFKVKLDDAREVTVWNIAPSNW 236
BLAST of CN184703 vs. ExPASy Swiss-Prot
Match: EXP17_ARATH (Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.333e-45 Identity = 81/131 (61.83%), Postives = 104/131 (79.39%), Query Frame = 2 Query: 8 ALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTG-WQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 397 A ++DNGGWCNPP HFDMA+PAFL IA+Y+AGIVPI ++++ C + GG+RFT+NG +YF LVLI+NV G G++ V IKGSK+ W+ MSRNWG N+QSN+YLNGQSLSF++ SDG + NVVP NW Sbjct: 113 AQASDNGGWCNPPRPHFDMAQPAFLTIAKYKAGIVPILYKKVGCRRSGGMRFTINGRNYFELVLISNVAGGGEISKVWIKGSKSNKWETMSRNWGANYQSNTYLNGQSLSFKVQLSDGSIKAALNVVPSNW 243
BLAST of CN184703 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2) HSP 1 Score: 181.415 bits (459), Expect = 3.980e-45 Identity = 79/132 (59.85%), Postives = 103/132 (78.03%), Query Frame = 2 Query: 8 ALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSK--TGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 397 AL +D+GGWCNPP HFDMA+PA+ +I YR GIVP++FRR+PC ++GG+RFTV G YF LVL+TNV AG V S+ ++GS+ GW AMSRNWG NWQS +YL+GQ LSF++TA+DG+T+ VVP +W Sbjct: 119 ALPSDDGGWCNPPRPHFDMAQPAWERIGVYRGGIVPVAFRRVPCRRRGGVRFTVAGRDYFELVLVTNVAAAGSVRSMEVRGSRRGAGWMAMSRNWGANWQSLAYLDGQGLSFRVTATDGQTIVFAGVVPPSW 250
BLAST of CN184703 vs. ExPASy Swiss-Prot
Match: EXP24_ORYSJ (Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2) HSP 1 Score: 178.333 bits (451), Expect = 3.369e-44 Identity = 77/130 (59.23%), Postives = 96/130 (73.85%), Query Frame = 2 Query: 11 LSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGS-KTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 397 L +DNGGWCNPP HFDMA+PA+ +I YRAGI+P+ ++R+PC KKGG+RFT+NGH YFNLVL+TNV G + S+ I GS T W M RNWG NW S SYL GQ LSF++T DG+T+ N+VP W Sbjct: 136 LPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVMYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDIMGSNSTDWMPMVRNWGANWHSLSYLTGQMLSFRVTNMDGQTLVFRNIVPSGW 265
BLAST of CN184703 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 5.747e-44 Identity = 77/129 (59.69%), Postives = 102/129 (79.07%), Query Frame = 2 Query: 14 SNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSK-TGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 397 SNDNGGWCNPP +HFD++ PAFLQIAQ +AGIVPIS+RR+PC K GGIR+T+ G+ YFNLV+++NVGGAGDV +S+KG+K W + RNWGQ WQ++ L G+SL+F++ D R TS +V+P +W Sbjct: 128 SNDNGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVPCVKVGGIRYTITGNPYFNLVMVSNVGGAGDVAGLSVKGNKRVKWTPLKRNWGQEWQTSEVLTGESLTFRVMTGDHRKATSWHVLPPDW 256 The following BLAST results are available for this feature:
BLAST of CN184703 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184703 ID=CN184703; Name=CN184703; organism=Citrus sinensis; type=EST; length=697bpback to top |