CN184702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184702 vs. ExPASy Swiss-Prot
Match: EXPA2_ARATH (Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 1.069e-29 Identity = 60/80 (75.00%), Postives = 71/80 (88.75%), Query Frame = -1 Query: 278 FTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTG-WQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 514 FT+NG+ YF+LVLITNVGGAGD+ +VS+KGSKT WQ+MSRNWGQNWQSN+YL GQSLSFQ+T SDGRTV S +VVP +W Sbjct: 165 FTINGNPYFDLVLITNVGGAGDIRAVSLKGSKTDQWQSMSRNWGQNWQSNTYLRGQSLSFQVTDSDGRTVVSYDVVPHDW 244
BLAST of CN184702 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.182e-28 Identity = 55/79 (69.62%), Postives = 66/79 (83.54%), Query Frame = -1 Query: 278 FTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 514 FT+NGH YFNLVLITNV GAGD+ S+KGSKTGW +++RNWGQNWQSN+ L GQSLSF++T+SD RT TS N+ P NW Sbjct: 169 FTINGHRYFNLVLITNVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSNW 247
BLAST of CN184702 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.433e-28 Identity = 54/80 (67.50%), Postives = 68/80 (85.00%), Query Frame = -1 Query: 278 FTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTG-WQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 514 FT+NGHSYFNLVL+TNVGGAGDVH+V++K ++ WQA+SRNWGQNWQS + L+GQ+LSF++T DGR+V SNN VP W Sbjct: 200 FTINGHSYFNLVLVTNVGGAGDVHAVAVKSERSAAWQALSRNWGQNWQSAALLDGQALSFRVTTGDGRSVVSNNAVPRGW 279 HSP 2 Score: 21.9422 bits (45), Expect = 1.433e-28 Identity = 8/9 (88.89%), Postives = 8/9 (88.89%), Query Frame = -3 Query: 513 CAKKGGIRF 539 C KKGGIRF Sbjct: 192 CQKKGGIRF 200
BLAST of CN184702 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 2.435e-28 Identity = 55/85 (64.71%), Postives = 70/85 (82.35%), Query Frame = -1 Query: 278 FTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTG------WQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 514 FTVNGH+YFNLVL+TNVGGAGDV S+++KGS +G WQ MSRNWGQNWQSN+YL+G++LSF++TA DGR++T +V P W Sbjct: 164 FTVNGHAYFNLVLVTNVGGAGDVRSLAVKGSGSGSRVGGRWQPMSRNWGQNWQSNAYLDGKALSFRVTAGDGRSLTCADVAPAGW 248 HSP 2 Score: 22.3274 bits (46), Expect = 2.435e-28 Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = -3 Query: 513 CAKKGGIRF 539 CA+KGG+RF Sbjct: 156 CARKGGVRF 164
BLAST of CN184702 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 2.633e-28 Identity = 55/79 (69.62%), Postives = 66/79 (83.54%), Query Frame = -1 Query: 278 FTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 514 FT+NGH YFNLVLITNV GAGD+ S+KGS+TGW ++SRNWGQNWQSN+ L GQ+LSF++T SD RT TS N+VP NW Sbjct: 166 FTINGHRYFNLVLITNVAGAGDIVRASVKGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPSNW 244
BLAST of CN184702 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 3.170e-28 Identity = 53/79 (67.09%), Postives = 66/79 (83.54%), Query Frame = -1 Query: 278 FTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 514 FT+NG YF LVL++NVGG G + SVSIKGS+TGW AMSRNWG NWQSN+YL+GQSLSF++T+SDG+T+T +V P W Sbjct: 170 FTINGRDYFELVLVSNVGGVGSIQSVSIKGSRTGWMAMSRNWGVNWQSNAYLDGQSLSFKVTSSDGQTLTFLDVAPAGW 248 HSP 2 Score: 21.9422 bits (45), Expect = 3.170e-28 Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = -3 Query: 513 CAKKGGIRF 539 CAK+GG+RF Sbjct: 162 CAKQGGVRF 170
BLAST of CN184702 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.707e-27 Identity = 56/86 (65.12%), Postives = 66/86 (76.74%), Query Frame = -1 Query: 278 RRKEE*GFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 535 R+K FT+NG YFNLVL+TNV GAGDV VS+KGS T W +SRNWGQNWQSN+ L GQSLSF++ SDGR+ TSNN+ P NW Sbjct: 160 RKKGGIRFTINGFKYFNLVLVTNVAGAGDVIKVSVKGSNTQWLDLSRNWGQNWQSNALLVGQSLSFRVKTSDGRSSTSNNIAPSNW 245
BLAST of CN184702 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 2.911e-27 Identity = 56/79 (70.89%), Postives = 64/79 (81.01%), Query Frame = -1 Query: 278 FTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 514 FTVNG YFNLVL+TNV GAGD++ VS+KGSKT W MSRNWGQNWQSN+ L GQSLSF++TASD R+ TS NV P W Sbjct: 171 FTVNGFRYFNLVLVTNVAGAGDINGVSVKGSKTDWVRMSRNWGQNWQSNAVLIGQSLSFRVTASDRRSSTSWNVAPATW 249
BLAST of CN184702 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 4.966e-27 Identity = 56/89 (62.92%), Postives = 68/89 (76.40%), Query Frame = -1 Query: 278 RRKEE*GFTVNGHSYFNLVLITNVGGAGDVHSVSIK---GSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 535 RRK FT+NGHSYFNLVL++NVGGAGDVH+V++K G K WQAM+RNWGQNWQS + L+GQ+LSF +T D R+V S NV P W Sbjct: 164 RRKGGMRFTINGHSYFNLVLVSNVGGAGDVHAVAVKAGGGRKARWQAMARNWGQNWQSGALLDGQALSFTVTTGDRRSVVSYNVAPAGW 252
BLAST of CN184702 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 4.204e-26 Identity = 55/86 (63.95%), Postives = 63/86 (73.26%), Query Frame = -1 Query: 278 RRKEE*GFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 535 R+K FT+NG YFNLVLITNV GAGD+ S+KG+ TGW MSRNWGQNWQSNS L GQ+LSF++T SD RT TS N P W Sbjct: 166 RKKGGVRFTINGFRYFNLVLITNVAGAGDIVRASVKGTSTGWMPMSRNWGQNWQSNSVLVGQALSFRVTGSDRRTSTSWNAAPAGW 251 The following BLAST results are available for this feature:
BLAST of CN184702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184702 ID=CN184702; Name=CN184702; organism=Citrus sinensis; type=EST; length=541bpback to top |