CN184702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184702 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 3.683e-22 Identity = 49/88 (55.68%), Postives = 63/88 (71.59%), Query Frame = -1 Query: 278 RRKEE*GFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSK--TGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 535 RR+ FTV G YF LVL+TNV AG V S+ ++GS+ GW AMSRNWG NWQS +YL+GQ LSF++TA+DG+T+ VVP +W Sbjct: 163 RRRGGVRFTVAGRDYFELVLVTNVAAAGSVRSMEVRGSRRGAGWMAMSRNWGANWQSLAYLDGQGLSFRVTATDGQTIVFAGVVPPSW 250
BLAST of CN184702 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.072e-21 Identity = 48/79 (60.76%), Postives = 58/79 (73.42%), Query Frame = -1 Query: 278 FTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 514 FTV+G F VLITNV G+GD+ +V IKGS+TGW M RNWGQNW N+ L Q+LSF++T+SD TVTS NV P NW Sbjct: 174 FTVDGGGIFISVLITNVAGSGDIAAVKIKGSRTGWLPMGRNWGQNWHINADLRNQALSFEVTSSDRSTVTSYNVSPKNW 252
BLAST of CN184702 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 1.789e-21 Identity = 45/80 (56.25%), Postives = 55/80 (68.75%), Query Frame = -1 Query: 278 FTVNGHSYFNLVLITNVGGAGDVHSVSIKGSK-TGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 514 FT+NGH YFNLVL+TNV G + S+ I GS T W M RNWG NW S SYL GQ+LSF++T DG+T+ N+VP W Sbjct: 170 FTINGHDYFNLVLVTNVATTGSIKSMDIMGSNSTDWMPMVRNWGANWHSLSYLTGQTLSFRVTNMDGQTLVFKNIVPSGW 249 HSP 2 Score: 21.557 bits (44), Expect = 1.789e-21 Identity = 7/9 (77.78%), Postives = 8/9 (88.89%), Query Frame = -3 Query: 513 CAKKGGIRF 539 C KKGG+RF Sbjct: 162 CIKKGGVRF 170
BLAST of CN184702 vs. ExPASy Swiss-Prot
Match: EXP24_ORYSJ (Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 2.324e-21 Identity = 45/80 (56.25%), Postives = 54/80 (67.50%), Query Frame = -1 Query: 278 FTVNGHSYFNLVLITNVGGAGDVHSVSIKGSK-TGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 514 FT+NGH YFNLVL+TNV G + S+ I GS T W M RNWG NW S SYL GQ LSF++T DG+T+ N+VP W Sbjct: 186 FTINGHDYFNLVLVTNVATTGSIKSMDIMGSNSTDWMPMVRNWGANWHSLSYLTGQMLSFRVTNMDGQTLVFRNIVPSGW 265 HSP 2 Score: 21.9422 bits (45), Expect = 2.324e-21 Identity = 7/9 (77.78%), Postives = 8/9 (88.89%), Query Frame = -3 Query: 513 CAKKGGIRF 539 C KKGG+RF Sbjct: 178 CVKKGGVRF 186
BLAST of CN184702 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 1.464e-20 Identity = 44/80 (55.00%), Postives = 54/80 (67.50%), Query Frame = -1 Query: 278 FTVNGHSYFNLVLITNVGGAGDVHSVSIKGSK-TGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 514 FT+NGH YFNLVL+TNV G + S+ + GS T W M RNWG NW S SYL GQ LSF++T DG+T+ N+VP W Sbjct: 188 FTINGHDYFNLVLVTNVATTGLIKSMDVMGSNSTDWLPMVRNWGANWHSLSYLTGQMLSFRVTNMDGQTLVFRNIVPSGW 267 HSP 2 Score: 21.9422 bits (45), Expect = 1.464e-20 Identity = 7/9 (77.78%), Postives = 8/9 (88.89%), Query Frame = -3 Query: 513 CAKKGGIRF 539 C KKGG+RF Sbjct: 180 CVKKGGVRF 188
BLAST of CN184702 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 1.467e-20 Identity = 43/80 (53.75%), Postives = 57/80 (71.25%), Query Frame = -1 Query: 278 FTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKT-GWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 514 FT+NGH YF LVL+TNVG AG + ++ +KGSK+ W AM+ NWG W S +YL GQ LSF++T +DG+T+ NVV W Sbjct: 170 FTINGHDYFQLVLLTNVGAAGSIKAMDVKGSKSPDWMAMAHNWGAQWHSLAYLTGQGLSFRVTITDGQTLVFPNVVRPGW 249 HSP 2 Score: 21.557 bits (44), Expect = 1.467e-20 Identity = 7/9 (77.78%), Postives = 8/9 (88.89%), Query Frame = -3 Query: 513 CAKKGGIRF 539 C KKGG+RF Sbjct: 162 CMKKGGVRF 170
BLAST of CN184702 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 2.021e-20 Identity = 42/79 (53.16%), Postives = 59/79 (74.68%), Query Frame = -1 Query: 278 FTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 514 FT+ G +YF LVL+TN+ G+G + S+S+KGS TGW MSRNWG NWQ + L GQ+LSF +T++ G+T+ ++VVP W Sbjct: 157 FTITGLNYFELVLVTNMAGSGSIASMSVKGSSTGWIQMSRNWGANWQCLAGLAGQALSFTVTSTGGQTIVFDSVVPAGW 235
BLAST of CN184702 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.639e-20 Identity = 41/79 (51.90%), Postives = 59/79 (74.68%), Query Frame = -1 Query: 278 FTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 514 FT+NG +YF LVL+TN+ G+G + S+S+KGS TGW M+RNWG NWQ + L GQ+LSF +T++ G+T+ ++ VP W Sbjct: 157 FTINGFNYFELVLVTNMAGSGSIASMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIVFDDAVPAGW 235
BLAST of CN184702 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 4.502e-20 Identity = 43/79 (54.43%), Postives = 58/79 (73.42%), Query Frame = -1 Query: 278 FTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 514 FT+ G ++F LVL++NV G+G V SVS+KG TGW ++RNWG NWQ NS L GQ+LSF +T++ G+T+ NVVP W Sbjct: 163 FTMGGFNFFELVLVSNVAGSGSVRSVSVKGGSTGWITLNRNWGANWQCNSGLVGQALSFAVTSTGGQTLYIYNVVPSWW 241
BLAST of CN184702 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 4.502e-20 Identity = 44/79 (55.70%), Postives = 55/79 (69.62%), Query Frame = -1 Query: 278 FTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 514 F G+ YF +VLI NVGGAGD+ V +KG+KTGW M +NWGQNW + + L GQ LSF++T SDG T NV+P NW Sbjct: 183 FETKGNPYFLMVLIYNVGGAGDIKYVQVKGNKTGWITMKKNWGQNWTTITVLTGQGLSFRVTTSDGITKDFWNVMPKNW 261 The following BLAST results are available for this feature:
BLAST of CN184702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184702 ID=CN184702; Name=CN184702; organism=Citrus sinensis; type=EST; length=541bpback to top |