DC887457
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887457 vs. ExPASy Swiss-Prot
Match: ARF3_ARATH (ADP-ribosylation factor 3 OS=Arabidopsis thaliana GN=ARF3 PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 8.677e-15 Identity = 40/115 (34.78%), Postives = 58/115 (50.43%), Query Frame = -2 Query: 206 DLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDREVCCFMISCKNSTNIDSVIDWLVKHSKSKS 550 DLGGQ R W Y A++YVVD++D D + +++ E H +L + L G +L+ NK D PGAL A+T+ + L I R+ F + +DWL KS S Sbjct: 67 DLGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEDELKGAVVLIFANKQDLPGALDDAAVTEALELHKIKSRQWAIFKTCAVKGEGLFEGLDWLSNTLKSGS 181
BLAST of DC887457 vs. ExPASy Swiss-Prot
Match: ARF1_BRARP (ADP-ribosylation factor 1 OS=Brassica rapa subsp. pekinensis GN=ARF1 PE=2 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 8.677e-15 Identity = 40/115 (34.78%), Postives = 58/115 (50.43%), Query Frame = -2 Query: 206 DLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDREVCCFMISCKNSTNIDSVIDWLVKHSKSKS 550 DLGGQ R W Y A++YVVD++D D + +++ E H +L + L G +L+ NK D PGAL A+T+ + L I R+ F + +DWL KS S Sbjct: 67 DLGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEEELKGAVVLIFANKQDLPGALDDAAVTEALELHKIKSRQWAIFKTCAVKGEGLFEGLDWLSNTLKSGS 181
BLAST of DC887457 vs. ExPASy Swiss-Prot
Match: ARL1_YEAST (ADP-ribosylation factor-like protein 1 OS=Saccharomyces cerevisiae GN=ARL1 PE=1 SV=4) HSP 1 Score: 79.7221 bits (195), Expect = 1.133e-14 Identity = 41/113 (36.28%), Postives = 59/113 (52.21%), Query Frame = -2 Query: 227 QLSFGDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDREVCCFMISCKNSTNIDSVIDWLV 565 +L+ DLGGQ R W Y +A+++VVD+ D D +S + ELH +L + L LLV NK D+PGALS ++ E+ L + DR S I +DWL+ Sbjct: 63 KLNVWDLGGQTSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQDQPGALSASEVSKELNLVELKDRSWSIVASSAIKGEGITEGLDWLI 175
BLAST of DC887457 vs. ExPASy Swiss-Prot
Match: ARL1_DROME (ADP-ribosylation factor-like protein 1 OS=Drosophila melanogaster GN=Arf72A PE=1 SV=5) HSP 1 Score: 78.5666 bits (192), Expect = 2.525e-14 Identity = 41/114 (35.96%), Postives = 61/114 (53.51%), Query Frame = -2 Query: 209 DLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDREVCCFMISCKNSTNIDSVIDWLVKHSKSK 550 DLGGQ R W Y AI+YVVD+AD D + IS+ EL +L + L+G L+VL NK D G ++ + +GL+++ +R F S +D +DWL +S+ Sbjct: 66 DLGGQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDMDGCMTVAEVHHALGLENLKNRTFQIFKTSATKGEGLDQAMDWLSNTLQSR 179
BLAST of DC887457 vs. ExPASy Swiss-Prot
Match: SAR1_CAEEL (GTP-binding protein SAR1 OS=Caenorhabditis elegans GN=ZK180.4 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.306e-14 Identity = 35/80 (43.75%), Postives = 54/80 (67.50%), Query Frame = -2 Query: 311 DLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLK 550 DLGG + R +W+ Y AV A+V+++D AD + + SR EL LL ++ +P+L+LGNKIDKPGALS+ L ++ ++ Sbjct: 71 DLGGHAQARRVWKDYFPAVDAVVFLIDVADAERMQESRVELESLLQDEQIASVPVLILGNKIDKPGALSEDQLKWQLNIQ 150
BLAST of DC887457 vs. ExPASy Swiss-Prot
Match: ARF1_SALBA (ADP-ribosylation factor 1 OS=Salix bakko GN=ARF1 PE=2 SV=3) HSP 1 Score: 77.7962 bits (190), Expect = 4.306e-14 Identity = 38/115 (33.04%), Postives = 61/115 (53.04%), Query Frame = -2 Query: 206 DLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDREVCCFMISCKNSTNIDSVIDWLVKHSKSKS 550 D+GGQ + R +W Y + +++VVD+ D D + +R ELH +LN+ L LLV NK D P A++ +TD++GL S+ R + + +DWL + SK+ Sbjct: 67 DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVGEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNISSKA 181
BLAST of DC887457 vs. ExPASy Swiss-Prot
Match: ARL2_CAEBR (ADP-ribosylation factor-like protein 2 OS=Caenorhabditis briggsae GN=evl-20.1 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 9.593e-14 Identity = 40/113 (35.40%), Postives = 60/113 (53.10%), Query Frame = -2 Query: 230 FQLSFGDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDREVCCFMISCKNSTNIDSVIDWL 568 FQL+ D+GGQ RS W+ Y + A+++VVD++D + L+ EL LL + LSG LLVL NK D PGA+ ++ + L+SI F + + + WL Sbjct: 60 FQLNLWDVGGQKSLRSYWKNYFESTDALIWVVDSSDRERLTQCSEELKKLLQEERLSGASLLVLANKSDLPGAIDVNSIAQVLELQSIKTHHWKIFSCCALSGERLVQAMTWL 172
BLAST of DC887457 vs. ExPASy Swiss-Prot
Match: ARF_MAIZE (ADP-ribosylation factor OS=Zea mays GN=ARF1 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 9.593e-14 Identity = 38/115 (33.04%), Postives = 60/115 (52.17%), Query Frame = -2 Query: 206 DLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDREVCCFMISCKNSTNIDSVIDWLVKHSKSKS 550 D+GGQ + R +W Y + +++VVD+ D D + +R ELH +LN+ L LLV NK D P A++ +TD++GL S+ R + +DWL + +KS Sbjct: 67 DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLNSLRQRHWYIQSTCATTGEGLYEGLDWLSSNIATKS 181
BLAST of DC887457 vs. ExPASy Swiss-Prot
Match: ARF1_ARATH (ADP-ribosylation factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 9.593e-14 Identity = 38/115 (33.04%), Postives = 61/115 (53.04%), Query Frame = -2 Query: 206 DLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDREVCCFMISCKNSTNIDSVIDWLVKHSKSKS 550 D+GGQ + R +W Y + +++VVD+ D D + +R ELH +LN+ L LLV NK D P A++ +TD++GL S+ R + + +DWL + SK+ Sbjct: 67 DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181
BLAST of DC887457 vs. ExPASy Swiss-Prot
Match: SAR1_PICPG (Small COPII coat GTPase SAR1 OS=Pichia pastoris (strain GS115) GN=SAR1 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.253e-13 Identity = 40/86 (46.51%), Postives = 53/86 (61.63%), Query Frame = -2 Query: 293 DLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDRE 550 DLGG + R +W+ Y V IVY+VD ADP+ SR EL LL LS +P+LVLGNKIDK A+S+ L +GL + T ++ Sbjct: 70 DLGGHEQARRVWKDYFPEVDGIVYLVDIADPERFEESRVELDALLKIEELSKVPVLVLGNKIDKSTAVSENELRHALGLMTTTGKD 155 The following BLAST results are available for this feature:
BLAST of DC887457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 158
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887457 ID=DC887457; Name=DC887457; organism=Citrus sinensis; type=EST; length=581bpback to top |