DC887457
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887457 vs. ExPASy Swiss-Prot
Match: SAR1_USTMA (Small COPII coat GTPase SAR1 OS=Ustilago maydis GN=SAR1 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.218e-13 Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = -2 Query: 296 DLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDR 550 DLGG + R +W+ Y V IV++VD D + + +R+EL LL+ LS +P L+LGNKID PGA+S++ L +GL T + Sbjct: 70 DLGGHQQARRLWKDYFPEVDGIVFLVDTQDHERFAEARAELDALLSIEELSSVPFLILGNKIDAPGAVSEEELRQAIGLYQTTGK 154
BLAST of DC887457 vs. ExPASy Swiss-Prot
Match: ARF_CANAL (ADP-ribosylation factor OS=Candida albicans GN=ARF1 PE=3 SV=4) HSP 1 Score: 73.9442 bits (180), Expect = 6.218e-13 Identity = 35/85 (41.18%), Postives = 53/85 (62.35%), Query Frame = -2 Query: 296 DLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDR 550 D+GGQ + R +W Y + I++VVD+ D D ++ +R EL +LN+ L LLVL NK D P A++ +T++MGL SI +R Sbjct: 67 DVGGQDKIRPLWRYYFQNTQGIIFVVDSNDRDRINEAREELQSMLNEDELKDAVLLVLANKQDLPNAMNAAEITEKMGLHSIMNR 151
BLAST of DC887457 vs. ExPASy Swiss-Prot
Match: ARF2_ORYSJ (ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica GN=ARF PE=2 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 6.218e-13 Identity = 36/115 (31.30%), Postives = 61/115 (53.04%), Query Frame = -2 Query: 206 DLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDREVCCFMISCKNSTNIDSVIDWLVKHSKSKS 550 D+GGQ + R +W Y + +++VVD+ D + + +R ELH +LN+ L LLV NK D P A++ +TD++GL S+ R + + +DWL + +K+ Sbjct: 67 DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 181
BLAST of DC887457 vs. ExPASy Swiss-Prot
Match: ARF1_CHLRE (ADP-ribosylation factor 1 OS=Chlamydomonas reinhardtii GN=ARF1 PE=2 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 6.218e-13 Identity = 36/115 (31.30%), Postives = 61/115 (53.04%), Query Frame = -2 Query: 206 DLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDREVCCFMISCKNSTNIDSVIDWLVKHSKSKS 550 D+GGQ + R +W Y + +++VVD+ D + + +R ELH +LN+ L LLV NK D P A++ +TD++GL S+ R + + +DWL + +K+ Sbjct: 67 DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNLANKT 181
BLAST of DC887457 vs. ExPASy Swiss-Prot
Match: ARF1_CATRO (ADP-ribosylation factor 1 OS=Catharanthus roseus GN=ARF1 PE=2 SV=3) HSP 1 Score: 73.9442 bits (180), Expect = 6.218e-13 Identity = 37/115 (32.17%), Postives = 60/115 (52.17%), Query Frame = -2 Query: 206 DLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDREVCCFMISCKNSTNIDSVIDWLVKHSKSKS 550 D+GGQ + R +W Y + +++VVD+ D D + +R ELH +LN+ L LLV NK D P A++ +TD+ GL S+ R + + +DWL + +K+ Sbjct: 67 DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKHGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 181
BLAST of DC887457 vs. ExPASy Swiss-Prot
Match: SAR1_LODEL (Small COPII coat GTPase SAR1 OS=Lodderomyces elongisporus GN=SAR1 PE=3 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.061e-12 Identity = 40/120 (33.33%), Postives = 63/120 (52.50%), Query Frame = -2 Query: 221 DLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSIT----------DREVCCFMISCKNSTNIDSVIDWLVKH 550 DLGG + R +W+ Y V+ IV++VDAAD + + S++EL L LS +P ++LGNKID P A+ + L + +GL + T R + FM+S + WL ++ Sbjct: 70 DLGGHQQARRLWKDYFPEVNGIVFLVDAADSERFAESKAELESLFKIEELSQVPFVILGNKIDVPTAVGEMELKNALGLYNTTGKDTGKLPEGQRPIEVFMVSVVMRSGYGDAFKWLSQY 189
BLAST of DC887457 vs. ExPASy Swiss-Prot
Match: SAR1_EMENI (Small COPII coat GTPase sar1 OS=Emericella nidulans GN=sar1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.061e-12 Identity = 38/85 (44.71%), Postives = 52/85 (61.18%), Query Frame = -2 Query: 296 DLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDR 550 DLGG + R +W+ Y VS IV++VDA D + S++EL LL LS +P LVLGNKID P A+S+ L ++GL T + Sbjct: 70 DLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELSKVPFLVLGNKIDHPDAVSEDELRHQLGLYQTTGK 154
BLAST of DC887457 vs. ExPASy Swiss-Prot
Match: SAR1_DEBHA (Small COPII coat GTPase SAR1 OS=Debaryomyces hansenii GN=SAR1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.061e-12 Identity = 34/86 (39.53%), Postives = 53/86 (61.63%), Query Frame = -2 Query: 293 DLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDRE 550 DLGG + R +W+ Y V+ IV++VDAADP+ + S++EL L L+ +P L+LGNKID A+ + L +GL + T ++ Sbjct: 70 DLGGHQQARRLWKDYFPEVNGIVFLVDAADPERFAESKAELESLFKIEELASVPFLILGNKIDASSAVGEMELKSALGLYNTTGKD 155
BLAST of DC887457 vs. ExPASy Swiss-Prot
Match: ARL2_RAT (ADP-ribosylation factor-like protein 2 OS=Rattus norvegicus GN=Arl2 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.061e-12 Identity = 41/120 (34.17%), Postives = 61/120 (50.83%), Query Frame = -2 Query: 209 FQLSFGDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDREVCCFMISCKNSTNIDSVIDWLVKHSKSK 568 F+L+ D+GGQ RS W Y + +++VVD+AD + + EL LL + L+G LL+ NK D PGALS A+ + + L SI S ++ IDWL+ S+ Sbjct: 60 FKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDWLLDDISSR 179
BLAST of DC887457 vs. ExPASy Swiss-Prot
Match: ARL2_MOUSE (ADP-ribosylation factor-like protein 2 OS=Mus musculus GN=Arl2 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.061e-12 Identity = 41/120 (34.17%), Postives = 61/120 (50.83%), Query Frame = -2 Query: 209 FQLSFGDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDREVCCFMISCKNSTNIDSVIDWLVKHSKSK 568 F+L+ D+GGQ RS W Y + +++VVD+AD + + EL LL + L+G LL+ NK D PGALS A+ + + L SI S ++ IDWL+ S+ Sbjct: 60 FKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDWLLDDISSR 179 The following BLAST results are available for this feature:
BLAST of DC887457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 158
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887457 ID=DC887457; Name=DC887457; organism=Citrus sinensis; type=EST; length=581bpback to top |