CN184693
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS19_PYRHO (30S ribosomal protein S19P OS=Pyrococcus horikoshii GN=rps19p PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.256e-32 Identity = 71/133 (53.38%), Postives = 95/133 (71.43%), Query Frame = -3 Query: 162 KKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 560 K+F +RG L+ L++MS +ELA+L AR RR +RGL + L++K+R AK+ G+ P+RTH R+MII+PEM+G I V+NGK F VEIKPEMIGHYL EF+ + K V+HG PGIGAT SS F+ +K Sbjct: 4 KEFRYRGYTLEQLMNMSLEELARLLPARQRRSLRRGLTPEQKKLLRKIRLAKK----GKYNKPIRTHCRDMIILPEMVGLTIYVHNGKEFVPVEIKPEMIGHYLGEFAPTRKRVQHGAPGIGATRSSMFVAVK 132
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS19_METJA (30S ribosomal protein S19P OS=Methanocaldococcus jannaschii GN=rps19p PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.256e-32 Identity = 69/141 (48.94%), Postives = 92/141 (65.25%), Query Frame = -3 Query: 162 KKRTFKK---FSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 575 KK+ K F +RG L+ L M E AKL AR RR RGL + L K++KA+R G++P +RTH R+ +I P+M+G GVYNGK F +V++ PEMIGHYL EFS++ KPV+HG PG+GAT SS F+P+K Sbjct: 12 KKQVISKKIEFRYRGYTLEELQQMPLREFAKLLPARQRRTLLRGLTPQQKKLAMKIKKARRLLNKGKEPRIIRTHCRDFVITPDMVGLTFGVYNGKEFVEVKVTPEMIGHYLGEFSLTRKPVQHGAPGMGATRSSMFVPIK 152
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS19_THEON (30S ribosomal protein S19P OS=Thermococcus onnurineus (strain NA1) GN=rps19p PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 6.565e-32 Identity = 68/133 (51.13%), Postives = 93/133 (69.92%), Query Frame = -3 Query: 162 KKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 560 K+F +RG + LL+MS ++ AKL AR RR +RGL + L++K+R AK+ G+ P+RTH R+M+I+PEM+G I VYNGK F VEIK EMIGHYL EF+++ K V+HG PG+GAT SS F+ +K Sbjct: 5 KEFRYRGYTFEELLNMSLEDFAKLLPARQRRSLKRGLSPEQKKLLRKIRLAKK----GKYNKPIRTHSRDMVILPEMVGMTIHVYNGKEFVPVEIKEEMIGHYLGEFALTRKIVQHGSPGVGATRSSMFVAIK 133
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS19_METKA (30S ribosomal protein S19P OS=Methanopyrus kandleri GN=rps19p PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.910e-31 Identity = 68/137 (49.64%), Postives = 95/137 (69.34%), Query Frame = -3 Query: 162 KRTFKKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 572 ++ + +F +RG L L+ M +E +L AR RR +RGL + L++K+R+A+R G+KP +RTH R+MII+PEM+G I VYNGK F +V+I+PEMIGHYL EF+ + K V+HG GIGAT SS F+PLK Sbjct: 15 EKEWVEFRYRGYTLGELMKMPIEEFIELLPARQRRSLKRGLPSRHKKLLRKVRRARRLLRRGKKPPVIRTHCRDMIILPEMVGLTIAVYNGKEFKEVKIEPEMIGHYLGEFAKTRKTVEHG--GIGATRSSLFVPLK 149
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS19_SULTO (30S ribosomal protein S19P OS=Sulfolobus tokodaii GN=rps19p PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.112e-30 Identity = 66/134 (49.25%), Postives = 90/134 (67.16%), Query Frame = -3 Query: 162 FKKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 563 +KKF +RG LD LL+M DE KL +R RR ++G K L++K+RK RE G+ ++TH+R+MII+PEM+G VYNGK F + ++ PEMIGHYL EFSI+ K V+HG PG+ AT SS F+ +K Sbjct: 9 WKKFRYRGKSLDELLNMPMDEFIKLLPSRQRRSLKKGFSDKQRRLLEKIRKYVRE---GKYSKTIKTHVRDMIILPEMVGLKFAVYNGKEFVEFQVVPEMIGHYLGEFSITTKKVEHGEPGLKATRSSLFLAMK 139
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS19_THESM (30S ribosomal protein S19P OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rps19p PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.758e-30 Identity = 62/133 (46.62%), Postives = 95/133 (71.43%), Query Frame = -3 Query: 162 KKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 560 K+F +RG + L++MS ++L+KL +R RR +RGL + L++K+R AK+ G+ P+RTH R+M+I+PEM+G +I V+NGK F V+I+ EMIGHY+ EF+++ K V+HG PG+GAT SS F+ +K Sbjct: 5 KEFKYRGYTFEELINMSLEDLSKLLPSRQRRSLKRGLTPEQKKLLRKIRLAKK----GKYKKPIRTHSRDMVILPEMVGMMIYVHNGKEFVPVQIREEMIGHYIGEFALTRKRVQHGSPGVGATRSSMFVAIK 133
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS19_METTH (30S ribosomal protein S19P OS=Methanobacterium thermoautotrophicum GN=rps19p PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.758e-30 Identity = 61/133 (45.86%), Postives = 91/133 (68.42%), Query Frame = -3 Query: 162 KKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 560 K+F +RG L+ L +M D++ KLF +R RR +RG + +++K+RK K+E +P +RTH R+MI++PEM+G G++NGK F +V+I+PEMIG Y EF+ + K V+HG PG+GAT S F+PLK Sbjct: 4 KEFRYRGYTLEELQEMPLDDVIKLFPSRQRRSLKRGFLPRQKKVLEKIRKIKKEGKTEGRPPVIRTHCRDMIVLPEMVGMTFGIHNGKEFVEVKIQPEMIGCYFGEFAPTRKKVEHGDPGMGATRFSMFVPLK 136
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS19_HALMA (30S ribosomal protein S19P OS=Haloarcula marismortui GN=rps19p PE=1 SV=4) HSP 1 Score: 131.724 bits (330), Expect = 2.758e-30 Identity = 64/132 (48.48%), Postives = 91/132 (68.94%), Query Frame = -3 Query: 162 KFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 557 +FSFRG LD L +M +E+A+L AR RR RGL + L++K R+A E DP+RTHLR+M +VPEM+G V++G+ F +V+++PEM+GHYL EF ++ V+HG+ GIGAT SS+F+PLK Sbjct: 12 EFSFRGHTLDELQEMELEEVAELLPARQRRSIVRGLTEEKHKLLEKAREAGEEETAN---DPIRTHLRDMPVVPEMVGLTFAVHDGQNFERVKVEPEMLGHYLGEFQLTRSSVEHGQAGIGATRSSKFVPLK 140
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS19_HALLT (30S ribosomal protein S19P OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rps19p PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.758e-30 Identity = 64/136 (47.06%), Postives = 92/136 (67.65%), Query Frame = -3 Query: 162 RTFKKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 569 R K+F++RG LD L +M DE+A+L AR RR RGL + L++K+R +E +P+RTHLR+M I+PE +G VYNG +F +V+++PEMIGH+L EF ++ V+HG+ GIGAT SS+F+PLK Sbjct: 9 REGKEFAYRGHSLDELQEMDVDEVAELLPARQRRSIVRGLGTEQQKLLEKVRSRDKETTAD---NPIRTHLRDMPILPEFVGVTFSVYNGHSFERVQVEPEMIGHFLGEFHLTRSTVEHGQAGIGATRSSKFVPLK 141
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS19_STAMF (30S ribosomal protein S19P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rps19p PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 3.602e-30 Identity = 70/134 (52.24%), Postives = 90/134 (67.16%), Query Frame = -3 Query: 162 FKKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 563 +KKF +RG L+ LL+M DE L AR RR +RGL + L+ K+RK +++ G+K ++TH+R+MII+PEMIG I VYNGK F V I PEMIGHYL EFS + K V+HG PG+ AT SS FI LK Sbjct: 11 WKKFRYRGKTLEELLNMPMDEFIGLLPARQRRSLKRGLTMAQVKLLAKIRKVRQKKLTGKKAI-IKTHVRDMIILPEMIGLTIAVYNGKEFIPVRIVPEMIGHYLGEFSPTTKRVQHGEPGLKATRSSMFISLK 143 The following BLAST results are available for this feature:
BLAST of CN184693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184693 ID=CN184693; Name=CN184693; organism=Citrus sinensis; type=EST; length=607bpback to top |