CN184693
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS19_METS3 (30S ribosomal protein S19P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rps19p PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.704e-30 Identity = 61/133 (45.86%), Postives = 90/133 (67.67%), Query Frame = -3 Query: 162 KKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 560 K F ++G L+ L DMS +E+ +LF AR RR +RG + ++ K+RK +E +P +RTH R+MI++PEM+G+ G+YNG+ F +V I+PEMIG Y EF+ + + V+HG PG+GAT SS F+PLK Sbjct: 4 KIFKYKGYTLEELQDMSLEEVMELFPARQRRSLKRGFLPRQQIVLDKMRKLNKEGSKDGRPVVIRTHCRDMIVLPEMVGTTFGIYNGQNFVEVTIEPEMIGCYFGEFAPTRQKVQHGDPGMGATRSSMFVPLK 136
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS19_AERPE (30S ribosomal protein S19P OS=Aeropyrum pernix GN=rps19p PE=3 SV=3) HSP 1 Score: 130.183 bits (326), Expect = 8.025e-30 Identity = 68/136 (50.00%), Postives = 90/136 (66.18%), Query Frame = -3 Query: 162 FKKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPG--EKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 563 +KKF +RG L+ LL M +ELA+LF AR RR RGL L+ K+RK +R G ++P +RTH+R+M+I+PEM+G I VYNGK F V+I PEMIGHYL EFS + + V+HG PG+ AT SS + K Sbjct: 9 WKKFRYRGRTLEELLKMDIEELARLFPARQRRSLLRGLTPAQQKLLLKVRKIRRRLEEGRLKRPPVIRTHVRDMVILPEMVGLTIAVYNGKEFIPVKIVPEMIGHYLGEFSPTTRIVQHGEPGLKATRSSLHVASK 144
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS19_SULAC (30S ribosomal protein S19P OS=Sulfolobus acidocaldarius GN=rps19p PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.048e-29 Identity = 64/134 (47.76%), Postives = 90/134 (67.16%), Query Frame = -3 Query: 162 FKKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 563 +KKF +RG L+ LL+M DE KL +R RR +RG K L++K+RK RE G++ ++TH+RNM+I+PEM+G VYNGK F + ++ PEMIG YL E+SI+ K V+HG PG+ AT SS F+ +K Sbjct: 9 WKKFRYRGKSLEDLLNMPMDEFIKLLPSRQRRSLKRGFSDKQRRLLEKIRKISRE---GKQNKVIKTHVRNMVILPEMVGLRFAVYNGKEFVEFQVVPEMIGRYLGEYSITTKKVEHGEPGLKATKSSLFLAMK 139
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS19_NATPD (30S ribosomal protein S19P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rps19p PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.335e-29 Identity = 63/132 (47.73%), Postives = 90/132 (68.18%), Query Frame = -3 Query: 162 KFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 557 +F++RG LD L +M DE+A+L AR RR +RGL + L+ + R+A E +P+RTHLR+M I+P +G VYNG++F +VE++PEMIGHYL EF ++ V+HG+ GIGAT SS+F+PLK Sbjct: 12 EFTYRGHTLDELQEMELDEVAELLPARQRRTIKRGLSVEQEKLLDEAREAGEEETAN---NPIRTHLRDMPILPRFVGLTFAVYNGQSFERVEVEPEMIGHYLGEFQLTRTSVEHGQAGIGATRSSKFVPLK 140
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS19_METS5 (30S ribosomal protein S19P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rps19p PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.983e-29 Identity = 61/134 (45.52%), Postives = 90/134 (67.16%), Query Frame = -3 Query: 162 FKKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 563 +KKF +RG L+ LL+M D+ KL AR RR ++G LI+K+RK +R++ + P++TH+R+++I+PEM+G VYNGK F + ++ PEMIGHYL EFSI + V+HG PG+ AT SS F+ +K Sbjct: 9 WKKFRYRGKSLEELLNMPMDDFIKLLPARQRRSLRKGFTPSERTLIEKIRKIRRDSKADK---PIKTHVRSLVILPEMVGLKFAVYNGKQFVEFQVVPEMIGHYLGEFSIPIQKVEHGEPGLKATRSSLFMAMK 139
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS19_HYPBU (30S ribosomal protein S19P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rps19p PE=3 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 6.793e-29 Identity = 68/134 (50.75%), Postives = 89/134 (66.42%), Query Frame = -3 Query: 162 FKKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 563 +KKF +RG L+ LL M D+ KL AR RR RGL L+ K+RKA+++ G+K V+TH+R+MII+PEM+G I VYNGK F V+I PEMIGHYL EFS + K V+HG PG+ AT S+ + LK Sbjct: 12 WKKFRYRGYTLEELLAMPMDQFIKLLPARQRRSLLRGLTDAQRRLLWKIRKARQKMLQGKKV-VVKTHVRDMIILPEMVGLTIAVYNGKEFIPVKITPEMIGHYLGEFSPTCKQVQHGEPGLKATRSTLHVALK 144
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS19_SULSO (30S ribosomal protein S19P OS=Sulfolobus solfataricus GN=rps19p PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.159e-28 Identity = 62/134 (46.27%), Postives = 89/134 (66.42%), Query Frame = -3 Query: 162 FKKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 563 +K F +RG +D LL+M DE KL +R RR +RG L++K+RK +RE G+ ++TH+RN++I+PE+IG + VYNGK F + + PEMIGHYL E+SI+ K V+HG PG+ AT SS F+ +K Sbjct: 9 WKNFKYRGKSIDELLNMPMDEFIKLLPSRQRRSLKRGFTDAQRHLLEKVRKYRRE---GKFNKTIKTHVRNLVILPELIGLKMAVYNGKEFVEFTVTPEMIGHYLGEYSITTKKVEHGEPGLKATRSSLFLAMK 139
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS19_HALSA (30S ribosomal protein S19P OS=Halobacterium salinarium GN=rps19p PE=3 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.159e-28 Identity = 60/132 (45.45%), Postives = 90/132 (68.18%), Query Frame = -3 Query: 162 KFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 557 +F++RG DLD L +MS +++A+L AR RR RGL + ++ + R++ E +P+RTHLR+M ++PE +G VY G+ F +VE++PEMIGHYL EF ++ V+HG+ GIGAT SS+F+PLK Sbjct: 12 EFTYRGHDLDELQEMSLEDVAELLPARQRRTITRGLSEEHHKVLAEARESGTEETAN---NPIRTHLRDMPVLPEFVGLTFAVYTGQEFERVEVQPEMIGHYLGEFQLTRSSVEHGQAGIGATRSSKFVPLK 140
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS19_HALS3 (30S ribosomal protein S19P OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rps19p PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.159e-28 Identity = 60/132 (45.45%), Postives = 90/132 (68.18%), Query Frame = -3 Query: 162 KFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 557 +F++RG DLD L +MS +++A+L AR RR RGL + ++ + R++ E +P+RTHLR+M ++PE +G VY G+ F +VE++PEMIGHYL EF ++ V+HG+ GIGAT SS+F+PLK Sbjct: 12 EFTYRGHDLDELQEMSLEDVAELLPARQRRTITRGLSEEHHKVLAEARESGTEETAN---NPIRTHLRDMPVLPEFVGLTFAVYTGQEFERVEVQPEMIGHYLGEFQLTRSSVEHGQAGIGATRSSKFVPLK 140
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS19_THEPD (30S ribosomal protein S19P OS=Thermofilum pendens (strain Hrk 5) GN=rps19p PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.513e-28 Identity = 63/136 (46.32%), Postives = 92/136 (67.65%), Query Frame = -3 Query: 162 KFSFRGVDLDALLDMSTDELAKLFSARARRR----FQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 557 KF++RG L+ L M ++LA++ AR RR F++G + + L++K+R+A + A G+K ++THLR+ II+PEM+G I V+NGK F VEI PE IGHYL EF+++ K V+HG PG+ AT SS F+ LK Sbjct: 6 KFTYRGYTLEELRQMPIEKLAEIMPARQRRSLLRVFKQGTSEEHLKLLEKIRRAAKLASEGKKQPVIKTHLRDFIILPEMVGLTIHVHNGKEFVPVEITPEKIGHYLGEFALTTKKVEHGEPGLKATRSSMFVALK 141 The following BLAST results are available for this feature:
BLAST of CN184693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184693 ID=CN184693; Name=CN184693; organism=Citrus sinensis; type=EST; length=607bpback to top |