CN184693
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS19_PICTO (30S ribosomal protein S19P OS=Picrophilus torridus GN=rps19p PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.868e-27 Identity = 60/133 (45.11%), Postives = 90/133 (67.67%), Query Frame = -3 Query: 162 KKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 560 K+FS+RG L+ L +M +EL L ARARR + R + + L +KL G+K + ++TH+R++I++P+ +G I +YNG ++ + EIKPEMIGHYL EF+++ K VKH PG+GAT SS+F+PLK Sbjct: 28 KEFSYRGHSLEELQNMELNELLPLLPARARRSYSRQMNHEQEKLYEKLL--------GDKEN-IKTHVRDLIVLPQFVGKTIELYNGNSYIKFEIKPEMIGHYLGEFALTRKEVKHSGPGVGATRSSKFLPLK 151
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS19_CALMQ (30S ribosomal protein S19P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rps19p PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.868e-27 Identity = 67/134 (50.00%), Postives = 85/134 (63.43%), Query Frame = -3 Query: 162 FKKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 563 +K F +RG D L+ M +E KL AR RR +RGL+ L++K+RKAK A G K PVRTH R+MII+PEM+G I VYNG T+ V I P IGHYL EF+I+ K V+HG PG+ AT S+ I K Sbjct: 55 WKNFKYRGFTFDELMKMPMNEFIKLLPARQRRTLKRGLRPCHRQLLEKIRKAKAFAAKG-KSIPVRTHCRDMIILPEMVGLTIFVYNGITYIPVPISPWHIGHYLGEFAITTKIVQHGEPGLKATKSTLHIAAK 187
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS19_PYRIL (30S ribosomal protein S19P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps19p PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 6.358e-27 Identity = 66/131 (50.38%), Postives = 86/131 (65.65%), Query Frame = -3 Query: 162 FSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 554 F +RG L+ LL+M DE KL AR RR +RGLK + L++K+RKAK+ G+K ++TH R+MII+PEM+G I VYNG T+ V I P IGHYL EF+I+ K V+HG PG+ AT SS I K Sbjct: 31 FRYRGKTLEELLNMPMDEFIKLLPARQRRSLKRGLKPEHRKLLEKIRKAKKLMAQGKKV-VIKTHCRDMIILPEMVGLTIHVYNGITYIPVFISPWHIGHYLGEFAITTKIVQHGEPGLKATRSSLHIAAK 160
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS19_PYRCJ (30S ribosomal protein S19P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rps19p PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 8.304e-27 Identity = 65/131 (49.62%), Postives = 86/131 (65.65%), Query Frame = -3 Query: 162 FSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 554 F +RG L+ LL+M DE KL AR RR +RGLK + L++K+RKAKR G+K ++TH R+MII+PEM+G I VYNG T+ V I P IGHYL EF+++ + V+HG PG+ AT SS I K Sbjct: 29 FRYRGKTLEELLNMPMDEFIKLLPARQRRSLKRGLKPEHRKLLEKIRKAKRLMAQGKKVT-IKTHCRDMIILPEMVGLTIHVYNGITYIPVFISPWHIGHYLGEFALTTRIVQHGEPGLKATRSSLHIAAK 158
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS19_CENSY (30S ribosomal protein S19P OS=Cenarchaeum symbiosum GN=rps19p PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 8.304e-27 Identity = 58/133 (43.61%), Postives = 87/133 (65.41%), Query Frame = -3 Query: 162 KKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 560 KKF +RG + L M D L +LF++R RR RG+ LI++++ A+ G++ +P++THLR++I++P M G + V++GK F VEI EMIGHYL E+ I+ K V HG PG+GA+ SS ++PLK Sbjct: 3 KKFEYRGKPAEELESMPLDSLFRLFNSRQRRSLTRGITDGKRKLIREIKDARA----GKEGNPIKTHLRDLIVLPSMTGVTVNVFSGKEFRPVEITTEMIGHYLGEYVITNKRVSHGAPGVGASRSSLYVPLK 131
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS19_METTP (30S ribosomal protein S19P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps19p PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.850e-26 Identity = 60/148 (40.54%), Postives = 94/148 (63.51%), Query Frame = -3 Query: 162 VAAGAAAGQPKKRTFKKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 605 +A A + PK++ ++F++RG + L M +E+A+L +R RR +RGL ++ + KLR +THLR+ I++PEM+G ++ ++NGKTF +VEI PEMIGHYL E++++ V HG G+GAT SS+F+PLK Sbjct: 1 MAKKAGSKLPKRK--EEFTYRGYRVSELAKMRLEEIAELLPSRQRRTLRRGLSKEHRKFMAKLRAR----------GTAKTHLRDAIVLPEMVGKVVEIHNGKTFQRVEIIPEMIGHYLGEYALTRARVIHGAAGVGATRSSKFVPLK 136
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS19_META3 (30S ribosomal protein S19P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps19p PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.850e-26 Identity = 58/139 (41.73%), Postives = 88/139 (63.31%), Query Frame = -3 Query: 162 PKKRTFKKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 578 P++R +F ++G L L +M + ++ AR RR ++G+ K L+ K++KA+R A G+ P +RTH R+ +I PEMIG G+YNGK F +V++ E IG +L EF+ S K V+HG PG+GAT S F+P+K Sbjct: 26 PRRRV--EFKYKGFTLGELQEMPIKKFMEIVPARQRRSMKKGITPKQRKLVMKIKKARRLANRGKDPRTIRTHCRDFVITPEMIGLPFGIYNGKEFIEVKLVEEAIGRFLGEFAPSRKVVQHGSPGMGATRGSMFVPIK 162
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS19_THEAC (30S ribosomal protein S19P OS=Thermoplasma acidophilum GN=rps19p PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.416e-26 Identity = 60/133 (45.11%), Postives = 87/133 (65.41%), Query Frame = -3 Query: 162 KKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 560 K+F+++G L+ L MS +EL K+ ARARR R + L++KL + + V+TH+R++II+P +G I+ VYNG ++ + EIKPEMIGHYL EF ++ K VKH PG+GAT SS+F+PLK Sbjct: 28 KEFTYKGYSLEDLQKMSMEELIKILPARARRTLLREPNYEQKKLMEKLESDEED---------VKTHVRDVIILPNYVGKIVEVYNGNSYFKFEIKPEMIGHYLGEFVMTRKEVKHSGPGVGATRSSKFMPLK 151
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS19_METST (30S ribosomal protein S19P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps19p PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.416e-26 Identity = 58/133 (43.61%), Postives = 84/133 (63.16%), Query Frame = -3 Query: 162 KKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 560 K F FRG L+ L +MS DE+ +L +R RR +RG + ++ K+ K K +P ++TH R+MI++P M+G G+YNG+ F +V I+PEMIG Y EF+ + V+HG PG+GAT SS F+PLK Sbjct: 4 KIFKFRGYTLEELQEMSLDEVIELLPSRQRRSLKRGFLPRQEKVLDKMEKVKDMKNDSGRPIVIKTHCRDMIVLPNMVGYTFGIYNGQEFVEVTIQPEMIGCYFGEFAQTRGRVQHGDPGMGATRSSMFVPLK 136
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS19_NITMS (30S ribosomal protein S19P OS=Nitrosopumilus maritimus (strain SCM1) GN=rps19p PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.383e-26 Identity = 56/133 (42.11%), Postives = 91/133 (68.42%), Query Frame = -3 Query: 162 KKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 560 K+F++RG+ + L +MS ++L +LF+AR RR RG+ LI++++ AK G+ +P++TH+R++II+P M+ + V++GK F V I+ EMIGHYL E+ I+ + V HG PG+GA+ SS ++PLK Sbjct: 3 KEFAYRGIPKEELDNMSLEKLFQLFNARQRRSLTRGITDGKRKLIEEIKAAKA----GKLKNPIKTHVRDLIILPYMVDVTVNVFSGKEFRPVTIRTEMIGHYLGEYVITNRKVSHGAPGVGASRSSLYVPLK 131 The following BLAST results are available for this feature:
BLAST of CN184693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184693 ID=CN184693; Name=CN184693; organism=Citrus sinensis; type=EST; length=607bpback to top |