CN184693
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS19_METBF (30S ribosomal protein S19P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps19p PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.117e-22 Identity = 55/148 (37.16%), Postives = 91/148 (61.49%), Query Frame = -3 Query: 162 VAAGAAAGQPKKRTFKKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 605 +A +++ PK++ ++++RG + L ++S +E A+L +R RR +RG ++ + ++ K+ VRTH R++II+PEMIG I ++NGK F V+++PEMIGH EF+ + V HG G+GAT SS+F+PLK Sbjct: 1 MAKKSSSRLPKRKG--EYTYRGKTVSELQELSLEEFAELLPSRERRSIKRGFTDGQKKVLHEFKEGKK----------VRTHHRDLIILPEMIGQTIEIHNGKGFVSVDLQPEMIGHRFGEFAPTRSRVSHGSAGVGATRSSKFVPLK 136
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS19_UNCMA (30S ribosomal protein S19P OS=Uncultured methanogenic archaeon RC-I GN=rps19p PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.610e-22 Identity = 52/142 (36.62%), Postives = 87/142 (61.27%), Query Frame = -3 Query: 162 AGQPKKRTFKKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 587 AG+ KR ++F++RG+ + + + +++A L AR RR+ +R + L+ ++ + + ++THLR+MII+PEM+G ++NGK + VE PEM+GHYL EF+++ V HG GIGAT S+++PLK Sbjct: 9 AGRLPKRK-EEFTYRGLTIAEMKKLDMNQVAALLPARQRRKIKREFGEEHQKLLNAVKAGETK---------IKTHLRDMIILPEMVGVTFEIHNGKEWKAVETTPEMVGHYLGEFALTRHSVSHGSAGIGATRGSKYVPLK 140
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS19_METLZ (30S ribosomal protein S19P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps19p PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 4.715e-22 Identity = 56/139 (40.29%), Postives = 84/139 (60.43%), Query Frame = -3 Query: 162 PKKRTFKKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 578 PK+R +++++ G +++ L MS DEL + + ARR+ RG R + K+ + D VRTH R+MII+PEM+G + +Y+GK F VEI E + HY EF+++ K V HG GIGAT SS+++PLK Sbjct: 10 PKRR--EEYTYHGYNIEQLKAMSMDELLAIMPSGARRKVLRGFTRDEEDVRAKIAEG----------DGVRTHSRSMIILPEMVGKNVAIYSGKEFINVEIPVEGVFHYFGEFALTRKKVTHGSAGIGATKSSKYVPLK 136 The following BLAST results are available for this feature:
BLAST of CN184693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184693 ID=CN184693; Name=CN184693; organism=Citrus sinensis; type=EST; length=607bpback to top |