CN184687

Overview
NameCN184687
Unique NameCN184687
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184687 vs. ExPASy Swiss-Prot
Match: DFRA_DIACA (Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.460e-21
Identity = 55/184 (29.89%), Postives = 104/184 (56.52%), Query Frame = -2
Query:  178 DESSWSSVDLCESLQI--W-YALSKILAEKAAWEFCGHNGIDLVTILPSFVIGPSLPPDLCSTASDVLGLLKGEKEKFQWHGRMGYVHIDDVALCHILVYEHQNSHGRYLCSSTVVDNNELVSLLSTRYPLLPIPERFE--LLDRPYYEFNTSKLTSLLGFKFK-SIEEMFDDCIAWFDEQGYL 711
            DE+ WS++D   S+++  W Y +SKILAE+AAW++   N ++ ++I+P  V+GP + P +  +    L  +   +  +    +  +VH+DD+ + HI +YE+  ++GRY+ S+      ++  +L   YP   +P +F+    D    +F++ KLT  LGF+FK  +++M+   +     +G L
Sbjct:  159 DETCWSALDFIRSVKMTGWMYFVSKILAEQAAWKYAAENNLEFISIIPPLVVGPFIMPSMPPSLITALSPITRTESHYTIIKQGQFVHLDDLCMSHIFLYENPKANGRYIASACAATIYDIAKMLREEYPEYNVPTKFKDYKEDMGQVQFSSKKLTD-LGFEFKYGLKDMYTAAVESCRAKGLL 341          
BLAST of CN184687 vs. ExPASy Swiss-Prot
Match: DFRA_ANTMA (Dihydroflavonol-4-reductase OS=Antirrhinum majus GN=DFRA PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.891e-20
Identity = 61/184 (33.15%), Postives = 99/184 (53.80%), Query Frame = -2
Query:  178 DESSWSSVDLCESLQI--W-YALSKILAEKAAWEFCGHNGIDLVTILPSFVIGPSLPPDLCSTASDVLGLLKGEKEKFQWHGRMGYVHIDDVALCHILVYEHQNSHGRYLCSSTVVDNNELVSLLSTRYPLLPIPERFELLDR--PYYEFNTSKLTSLLGFKFK-SIEEMFDDCIAWFDEQGYL 711
            DE+  S +D   S ++  W Y +SKILAEKA  E    N ID ++I+P  V+GP + P    +    L  + G +  +    +  YVH+DD+   HI ++E+  + GRY+CSS      ++  L++  +P   IP+ FE +D+  P   F++ K+   +GF FK ++E+M    I    E+G L
Sbjct:  155 DETDSSDMDFINSKKMTGWMYFVSKILAEKAGMEAAKENNIDFISIIPPLVVGPFIMPTFPPSLITALSPITGNEAHYSIIKQCQYVHLDDLCEGHIFLFEYPKAEGRYICSSHDATIYDIAKLITENWPEYHIPDEFEGIDKDIPVVSFSSKKMIG-MGFIFKYTLEDMVRGAIDTCREKGML 337          
BLAST of CN184687 vs. ExPASy Swiss-Prot
Match: DFRA_SOLLC (Dihydroflavonol-4-reductase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.175e-19
Identity = 62/188 (32.98%), Postives = 103/188 (54.79%), Query Frame = -2
Query:  205 DSKIPLDESSWSSVDLCESLQI--W-YALSKILAEKAAWEFCGHNGIDLVTILPSFVIGP----SLPPDLCSTASDVL---GLLKGEKEKFQWHGRMGYVHIDDVALCHILVYEHQNSHGRYLCSSTVVDNNELVSLLSTRYPLLPIPERFELLDR--PYYEFNTSKLTSLLGFKFK-SIEEMFDDCI 729
            D K+  DE+SWS +D   + ++  W Y +SKILAEKAA E    N ID ++I+P  V+GP    + PP L +  S +    G++K  +          YVH+DD+   HI +YEH  + GR++CSS      ++  ++  ++P   +P  F+ +D+      F++ KL   + F+FK ++E+M+   I
Sbjct:  149 DQKLFYDETSWSDLDFIYAKKMTGWMYFVSKILAEKAAMEEARKNNIDFISIIPPLVVGPFITSTFPPSLITALSLITAHYGIIKQGQ----------YVHLDDLCEAHIFLYEHPKAEGRFICSSHHAIIYDVAKMVRQKWPEYYVPTEFKGIDKDLALVSFSSKKLMD-IKFQFKHTLEDMYKGAI 325          
The following BLAST results are available for this feature:
BLAST of CN184687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
DFRA_DIACA4.460e-2129.89Dihydroflavonol-4-reductase OS=Dianthus caryophyll... [more]
DFRA_ANTMA2.891e-2033.15Dihydroflavonol-4-reductase OS=Antirrhinum majus G... [more]
DFRA_SOLLC4.175e-1932.98Dihydroflavonol-4-reductase OS=Solanum lycopersicu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005O08_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005O08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184687 ID=CN184687; Name=CN184687; organism=Citrus sinensis; type=EST; length=742bp
TTGCATCCTTCATGAGTCTACAGTCTACTAGCTTGATTGATCAAGTATAT
TGGATTGCTGATGTTCTGGGATGGCAGCATCAAACTGCAATTTCAAGCAG
CTACATGTATAAATAATTATTACGTTATATATCCACAAGCACTACTGCAG
TACTGGTGTTATATATGCTGATCAGCAAAGATAGCCTTGCTCATCAAACC
AAGCAATGCAATCATCAAACATCTCTTCAATAGACTTGAACTTGAATCCC
AGCAGACTAGTCAACTTTGACGTGTTGAACTCATAGTATGGTCTGTCTAG
TAGCTCAAACCTTTCTGGGATGGGAAGCAAAGGATAGCGTGTTGATAACA
AGGATACTAACTCATTATTATCCACAACGGTTGAGCTACAAAGGTATCGC
CCGTGACTATTTTGGTGTTCATAAACAAGGATGTGGCAAAGCGCTACATC
ATCGATGTGAACGTATCCCATCCTTCCGTGCCATTGAAATTTCTCCTTTT
CGCCTTTGAGTAAGCCAAGAACATCGGATGCAGTAGAACATAGGTCAGGT
GGCAAACTAGGTCCAATAACGAAAGAGGGTAGAATGGTAACTAAGTCAAT
CCCGTTATGGCCACAGAATTCCCATGCAGCTTTCTCAGCTAGGATTTTTG
ATAGAGCATACCATATCTGAAGTGACTCGCAGAGGTCAACAGAGCTCCAA
GATGATTCGTCAAGAGGTATTTTGGAATCAAAATCATATCTT
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