CN184682
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_PROMM (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9313) GN=ndk PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 8.923e-33 Identity = 67/126 (53.17%), Postives = 86/126 (68.25%), Query Frame = -1 Query: 271 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWIYE 645 RFE+KGF L GLK +T R A +HY +PFF L+++ITSGPV+AM+WEG+GV+ + R +IGAT P + PGTIRGDLA+ GRN+IHGSD ++AQ EI LWF +N W S W E Sbjct: 26 RFERKGFKLVGLKQVTPSRDLAGEHYGVHRERPFFAGLVDFITSGPVIAMVWEGDGVIASARKLIGATKPLDAEPGTIRGDLAVNIGRNVIHGSDGPDTAQFEINLWFSAEELNAWTPSDQSWRIE 151
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_PROM9 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9312) GN=ndk PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 8.923e-33 Identity = 67/123 (54.47%), Postives = 87/123 (70.73%), Query Frame = -1 Query: 280 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPW 645 RFEKKGF L GLK + + A+ HY +PFFG L+++I+SGPVVAM+WEGEGV+ + R +IGAT P ++ PGTIRGDLAI GRNIIHGSD ++A+ EI LWF + + W +S W Sbjct: 26 RFEKKGFKLVGLKQLIPSKDLAQNHYGVHRERPFFGDLVDFISSGPVVAMVWEGEGVILSARKLIGATKPLEAEPGTIRGDLAIDIGRNIIHGSDGEDTAKFEIDLWFNEEELCEWYTSDSKW 148
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_PROM3 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9303) GN=ndk PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 8.923e-33 Identity = 67/126 (53.17%), Postives = 86/126 (68.25%), Query Frame = -1 Query: 271 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWIYE 645 RFE+KGF L GLK + R A +HY +PFF L+++ITSGPVVAM+WEG+GV+ + R +IGAT P ++ PGTIRGDLA+ GRN+IHGSD ++AQ EI LWF +N W S W E Sbjct: 26 RFERKGFKLVGLKQLAPSRELAGEHYGVHRERPFFAGLVDFITSGPVVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDGPDTAQFEINLWFSPEELNAWTPSDQSWRVE 151
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_STACT (Nucleoside diphosphate kinase OS=Staphylococcus carnosus (strain TM300) GN=ndk PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.165e-32 Identity = 67/126 (53.17%), Postives = 89/126 (70.63%), Query Frame = -1 Query: 271 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWIYE 645 R EKKG L G K MTV + AE HY + + KPF+ L+ +ITS PV AM+ EGE VV+ R +IG TNP ++APGTIRGDL + GRN+IHGSDSVESA++EI+LWF ++ + ++ W+YE Sbjct: 24 RLEKKGLKLVGGKFMTVSKEKAETHYGEHADKPFYEGLVSFITSAPVFAMVVEGENVVEVTRNMIGKTNPTEAAPGTIRGDLGLTVGRNVIHGSDSVESAKREISLWFEPNELSVYTANDEEWLYE 149
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_PROMA (Nucleoside diphosphate kinase OS=Prochlorococcus marinus GN=ndk PE=3 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 1.165e-32 Identity = 68/126 (53.97%), Postives = 84/126 (66.67%), Query Frame = -1 Query: 271 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 645 RFE+KGF L GLK + + AEKHY +PFF L+ +ITSGPVVAM+WEG+GV+ + R +IGAT P ++ PGTIRGDL I GRN+IHGSD E+A EI LWF + NW S W E Sbjct: 26 RFERKGFKLVGLKQLIPSKELAEKHYGVHKERPFFTGLVGFITSGPVVAMVWEGDGVILSARKLIGATKPLEAEPGTIRGDLGINIGRNVIHGSDGPETASFEIDLWFNSSELNNWNPSDQKWRVE 151
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_PROM0 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9301) GN=ndk PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.522e-32 Identity = 66/123 (53.66%), Postives = 88/123 (71.54%), Query Frame = -1 Query: 280 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPW 645 RFEKKGF L GLK + + A+ HY +PFFG L+++I+SGPVVAM+WEGEGV+ + R +IG+T P ++ PGTIRGDLAI GRNIIHGSD ++A+ EI LWF + + W++S W Sbjct: 26 RFEKKGFKLVGLKQLIPSKELAQNHYGVHRERPFFGDLVDFISSGPVVAMVWEGEGVILSARKLIGSTKPLEAEPGTIRGDLAIDIGRNIIHGSDGEDTAKFEIDLWFNEEELCEWETSDLKW 148
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_STAS1 (Nucleoside diphosphate kinase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=ndk PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.596e-32 Identity = 70/126 (55.56%), Postives = 84/126 (66.67%), Query Frame = -1 Query: 271 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 645 R E+KG L G K MTV + AE+HY + + KPF+ LI +ITS PV AM+ EGE V R IIG TNP+++ PGTIRGDL + GRNIIHGSDSVESA KEI LWF D + S W+YE Sbjct: 24 RIERKGLKLVGGKFMTVPQSLAEEHYAEHTDKPFYKHLISFITSAPVFAMVVEGEDAVHVARHIIGKTNPSEATPGTIRGDLGLTVGRNIIHGSDSVESANKEINLWFKADELSEYSESRESWLYE 149
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_STAES (Nucleoside diphosphate kinase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=ndk PE=3 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 3.391e-32 Identity = 68/126 (53.97%), Postives = 83/126 (65.87%), Query Frame = -1 Query: 271 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 645 R EKKG L G K M V AEKHY + KPF+ LI +ITS PV AM+ EGE V R IIG+TNP+++APGTIRGD + GRNIIHGSDS ESAQ+E+ LWF I +++ W+YE Sbjct: 24 RIEKKGLKLVGGKFMQVPMELAEKHYSEHEGKPFYDKLISFITSAPVFAMVVEGENAVAVSRKIIGSTNPSEAAPGTIRGDYGLNLGRNIIHGSDSTESAQREVKLWFTSSEIADYKEPREDWLYE 149
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_STAEQ (Nucleoside diphosphate kinase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=ndk PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.391e-32 Identity = 68/126 (53.97%), Postives = 83/126 (65.87%), Query Frame = -1 Query: 271 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 645 R EKKG L G K M V AEKHY + KPF+ LI +ITS PV AM+ EGE V R IIG+TNP+++APGTIRGD + GRNIIHGSDS ESAQ+E+ LWF I +++ W+YE Sbjct: 24 RIEKKGLKLVGGKFMQVPMELAEKHYSEHEGKPFYDKLISFITSAPVFAMVVEGENAVAVSRKIIGSTNPSEAAPGTIRGDYGLNLGRNIIHGSDSTESAQREVKLWFTSSEIADYKEPREDWLYE 149
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_BACLD (Nucleoside diphosphate kinase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=ndk PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 5.784e-32 Identity = 65/126 (51.59%), Postives = 87/126 (69.05%), Query Frame = -1 Query: 274 IRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIY 648 +RFE+KG L G KLM V A +HY++ + KPFFG L+++ITSGPV AM+WEGE + R +IG TNP ++ PGTIRGD + G+NIIHGSDS ESA +EI L+F D + + ++ WIY Sbjct: 23 LRFERKGLQLIGAKLMKVSEETAGEHYKEHNGKPFFGELVDFITSGPVFAMVWEGEDAIAVARQLIGKTNPKEALPGTIRGDFGMFVGKNIIHGSDSPESAAREINLFFKEDELVEDEKLMNQWIY 148 The following BLAST results are available for this feature:
BLAST of CN184682 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184682 ID=CN184682; Name=CN184682; organism=Citrus sinensis; type=EST; length=648bpback to top |