CN184682
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_HALMA (Nucleoside diphosphate kinase OS=Haloarcula marismortui GN=ndk PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 5.986e-29 Identity = 59/128 (46.09%), Postives = 85/128 (66.41%), Query Frame = -1 Query: 271 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESA--QKEIALWFPDGP-INWQSSLHPWIYE 645 RFE +G + G K M +D+ AE+HY + KPFF L+++ITSGPV AM+WEG+ + RT++G T+PA+SAPGTIRGD + GRN+IHGSD + ++EI L+F + ++W W+YE Sbjct: 27 RFEDRGLKMVGGKFMQIDQELAEEHYGEHEDKPFFDGLVDFITSGPVFAMVWEGQDATRQVRTMMGETDPAESAPGTIRGDYGLDLGRNVIHGSDHEDEGANEREIELFFDEAELVDWDQIDSSWLYE 154
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_FRASN (Nucleoside diphosphate kinase OS=Frankia sp. (strain EAN1pec) GN=ndk PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 7.817e-29 Identity = 59/109 (54.13%), Postives = 84/109 (77.06%), Query Frame = -1 Query: 319 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 645 R E+KG + L+L T++R AE HY + +SKPFFG L+E+ITSGP+VA++ EG V+ R +IGAT+P ++APG++RGD A+ G+N+IHGSDS ESA++EI L+FP Sbjct: 26 RIERKGLKIVALELRTLERSVAETHYGEHASKPFFGELVEFITSGPLVALVAEGPRAVEALRGLIGATDPVKAAPGSLRGDFALEIGQNLIHGSDSPESAKREIDLFFP 134
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_DEIGD (Nucleoside diphosphate kinase OS=Deinococcus geothermalis (strain DSM 11300) GN=ndk PE=3 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 7.817e-29 Identity = 58/108 (53.70%), Postives = 78/108 (72.22%), Query Frame = -1 Query: 322 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 645 R +KKG+ + GLK M + R AE+HY + +PFFG L+++ITSGPVVA+ EGE + R ++GATNPA +APGTIR D A TG N+ HGSDS ESA +E++L+F Sbjct: 24 RIQKKGYRVVGLKQMLISRELAERHYAEHRERPFFGELVDFITSGPVVAIALEGENAIAGWRAMMGATNPANAAPGTIRADFATTTGENVTHGSDSPESAARELSLFF 131
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_COREF (Nucleoside diphosphate kinase OS=Corynebacterium efficiens GN=ndk PE=3 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 7.817e-29 Identity = 59/111 (53.15%), Postives = 77/111 (69.37%), Query Frame = -1 Query: 316 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSA-PGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 645 R E+KG L L L DR AEKHYE+ + KPFFG L+E+ITS P++A I EGE + R + G T+P A PGTIRGD A+ G N++HGSDS ESA++EI++WFP+ Sbjct: 25 RIERKGLKLAALDLRVADRETAEKHYEEHADKPFFGELVEFITSAPLIAGIVEGERAIDAWRQLAGGTDPVSKATPGTIRGDFALTVGENVVHGSDSPESAEREISIWFPN 135
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_NATPD (Nucleoside diphosphate kinase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=ndk PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.021e-28 Identity = 63/127 (49.61%), Postives = 85/127 (66.93%), Query Frame = -1 Query: 271 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVE-SAQKEIALWFPDGPI-NWQSSLHPWIYE 645 RFE +G L K M +D A +HY + KPFF L E+ITSGPV AM+WEG+ V RT++G T+PA+SAPGTIRGD + GRN+IHGSD+ SA++EI L+F D + +++ PW+YE Sbjct: 27 RFEDRGLKLVAGKFMQIDDELAREHYAEHVDKPFFDELKEFITSGPVFAMVWEGQDAVAQVRTMMGETDPAESAPGTIRGDFGLDLGRNVIHGSDTEPGSAEREIGLFFDDDELQDYERIDEPWLYE 153
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_ROSCS (Nucleoside diphosphate kinase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=ndk PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.333e-28 Identity = 61/126 (48.41%), Postives = 85/126 (67.46%), Query Frame = -1 Query: 271 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 645 R E++G + GLKLM +D A +HY KPFF SLI YITSGPVV ++ G V++ R+++GATNP ++APGTIRGD A+ GRN+IH SDS E+ + E+ L+F + ++ + S WIYE Sbjct: 24 RIEQRGLRIVGLKLMQIDEALARRHYAIHEGKPFFDSLIAYITSGPVVVLVVTGANVIEMVRSMVGATNPGKAAPGTIRGDFALEIGRNLIHASDSPENGEMEVNLFFRAEELVDMRRSTDQWIYE 149
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_MYCTU (Nucleoside diphosphate kinase OS=Mycobacterium tuberculosis GN=ndkA PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.333e-28 Identity = 62/110 (56.36%), Postives = 78/110 (70.91%), Query Frame = -1 Query: 319 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQ-SAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 645 R E+KG ++ L+L TV A +HY + KPFFGSL+E+ITSGPVVA I EG + R + G T+P Q +APGTIRGD A+ T N++HGSDS ESAQ+EIALWFP Sbjct: 25 RIERKGLTIAALQLRTVSAELASQHYAEHEGKPFFGSLLEFITSGPVVAAIVEGTRAIAAVRQLAGGTDPVQAAAPGTIRGDFALETQFNLVHGSDSAESAQREIALWFP 134
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_MYCTA (Nucleoside diphosphate kinase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=ndk PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.333e-28 Identity = 62/110 (56.36%), Postives = 78/110 (70.91%), Query Frame = -1 Query: 319 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQ-SAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 645 R E+KG ++ L+L TV A +HY + KPFFGSL+E+ITSGPVVA I EG + R + G T+P Q +APGTIRGD A+ T N++HGSDS ESAQ+EIALWFP Sbjct: 25 RIERKGLTIAALQLRTVSAELASQHYAEHEGKPFFGSLLEFITSGPVVAAIVEGTRAIAAVRQLAGGTDPVQAAAPGTIRGDFALETQFNLVHGSDSAESAQREIALWFP 134
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_MYCBT (Nucleoside diphosphate kinase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=ndk PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.333e-28 Identity = 62/110 (56.36%), Postives = 78/110 (70.91%), Query Frame = -1 Query: 319 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQ-SAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 645 R E+KG ++ L+L TV A +HY + KPFFGSL+E+ITSGPVVA I EG + R + G T+P Q +APGTIRGD A+ T N++HGSDS ESAQ+EIALWFP Sbjct: 25 RIERKGLTIAALQLRTVSAELASQHYAEHEGKPFFGSLLEFITSGPVVAAIVEGTRAIAAVRQLAGGTDPVQAAAPGTIRGDFALETQFNLVHGSDSAESAQREIALWFP 134
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_MYCBP (Nucleoside diphosphate kinase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=ndk PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.333e-28 Identity = 62/110 (56.36%), Postives = 78/110 (70.91%), Query Frame = -1 Query: 319 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQ-SAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 645 R E+KG ++ L+L TV A +HY + KPFFGSL+E+ITSGPVVA I EG + R + G T+P Q +APGTIRGD A+ T N++HGSDS ESAQ+EIALWFP Sbjct: 25 RIERKGLTIAALQLRTVSAELASQHYAEHEGKPFFGSLLEFITSGPVVAAIVEGTRAIAAVRQLAGGTDPVQAAAPGTIRGDFALETQFNLVHGSDSAESAQREIALWFP 134 The following BLAST results are available for this feature:
BLAST of CN184682 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184682 ID=CN184682; Name=CN184682; organism=Citrus sinensis; type=EST; length=648bpback to top |