CN184682
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_LISW6 (Nucleoside diphosphate kinase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=ndk PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.602e-27 Identity = 59/124 (47.58%), Postives = 85/124 (68.55%), Query Frame = -1 Query: 277 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWI 645 + EKKG L KL+ +DR AE+HY + KPFF LI +ITSGPV AM+ EG+ V+K R ++G TNP ++ GTIR + A+ T RN+IHGSDS ESA++EI L+F P ++++ ++ W+ Sbjct: 24 KIEKKGIKLVAGKLIQIDRKLAEQHYAEHIGKPFFEDLIGFITSGPVFAMVLEGDDVIKIARRMMGKTNPLEADAGTIRAEYAVHTNRNVIHGSDSPESAKREIQLFFEPHEILSYEKAVDIWV 147
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_NOCFA (Nucleoside diphosphate kinase OS=Nocardia farcinica GN=ndk PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 9.556e-27 Identity = 57/114 (50.00%), Postives = 78/114 (68.42%), Query Frame = -1 Query: 307 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQ-SAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 645 R E+KG + L+L V A +HY + + KPFFGSLIE+ITSGPVVA + EG + R + G T+P + +APG+IRGD + T N++HGSDS ESA++EI LWFP+ P+ Sbjct: 25 RIERKGLKIAALELKQVSDELAREHYAEHADKPFFGSLIEFITSGPVVAAVLEGPRAIAAFRQLAGGTDPVEKAAPGSIRGDFGLETQYNLVHGSDSPESAKREIGLWFPEFPV 138
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_MYCPA (Nucleoside diphosphate kinase OS=Mycobacterium paratuberculosis GN=ndk PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.248e-26 Identity = 59/111 (53.15%), Postives = 76/111 (68.47%), Query Frame = -1 Query: 316 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSA-PGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 645 R E+KG +L L+L V + A +HY + KPFF SL+E+ITSGPVVA I EG + R + G T+P + A PGTIRGD + T N++HGSDSVESA++EI LWFPD Sbjct: 25 RIERKGLTLVALELRHVSQDLAAQHYAEHEGKPFFASLLEFITSGPVVAAIVEGPRAIAAFRQLAGGTDPVEKAIPGTIRGDFGLETQFNLVHGSDSVESAKREIGLWFPD 135
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_METST (Nucleoside diphosphate kinase OS=Methanosphaera stadtmanae (strain DSM 3091) GN=ndk PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.248e-26 Identity = 58/110 (52.73%), Postives = 75/110 (68.18%), Query Frame = -1 Query: 316 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 645 RFEK+G + K + + A+ HY + S KPFF LI YITSGPV AM+ EG+ V+ R ++GATNP ++ GTIRGD I TGRNI+H SDS ESAQ+EI L+F + Sbjct: 25 RFEKRGLKVIAAKTLMISEDLAKTHYGEHSDKPFFNDLISYITSGPVFAMVLEGDDVISLVRKMVGATNPKEADIGTIRGDYGIDTGRNIVHASDSEESAQREINLFFDE 134
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_THEFY (Nucleoside diphosphate kinase OS=Thermobifida fusca (strain YX) GN=ndk PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.630e-26 Identity = 55/110 (50.00%), Postives = 77/110 (70.00%), Query Frame = -1 Query: 316 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 645 R E+KG + ++L T+D A+ HYE+ KPFF SL+E+IT GP+VAM+ EG ++ R++ GAT+P +APGTIRGD + NI+HGSDS SA++EI L+FPD Sbjct: 24 RIERKGLKIVAMELRTLDEETAKAHYEEHVEKPFFSSLVEFITGGPLVAMVVEGNRAIEAFRSLAGATDPVLAAPGTIRGDYGLDVQANIVHGSDSTYSAEREIKLFFPD 133
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_ENCCU (Nucleoside diphosphate kinase OS=Encephalitozoon cuniculi GN=NDK1 PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.630e-26 Identity = 61/126 (48.41%), Postives = 79/126 (62.70%), Query Frame = -1 Query: 274 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDG--PINWQSSLHPWIY 645 RFE+KG L K + R E HY LSS PFF ++E + SG V+AM+W G+ V GR +IG TNP ++ GTIRGD + TG+NIIHGSD VE+A+KEI LW D P+++ WIY Sbjct: 24 RFEEKGLYLAASKCVIPKREVLETHYSHLSSMPFFSEMVEDMMSGMVLAMVWVGKDAVSIGRKLIGETNPQAASVGTIRGDYGVSTGKNIIHGSDCVENAEKEIKLWIGDDVQPVSFFDK--EWIY 147
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_PYRHO (Nucleoside diphosphate kinase OS=Pyrococcus horikoshii GN=ndk PE=1 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 2.129e-26 Identity = 60/128 (46.88%), Postives = 81/128 (63.28%), Query Frame = -1 Query: 271 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGR---NIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 645 RFEKKG + G+K++ +DR AEKHYE+ KPFF +LI+YIT PVV M+ EG V+ R + GAT+P +APGTIRGD + N+IH SDS ESA++EI+L+F + W Y+ Sbjct: 27 RFEKKGLKIVGMKMIWIDRELAEKHYEEHREKPFFKALIDYITKTPVVVMVLEGRYAVEVVRKMAGATDPKDAAPGTIRGDFGLEVSDAICNVIHASDSKESAEREISLFFKPEELFEYPRAADWFYK 154
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_MYCUA (Nucleoside diphosphate kinase OS=Mycobacterium ulcerans (strain Agy99) GN=ndk PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.129e-26 Identity = 58/110 (52.73%), Postives = 74/110 (67.27%), Query Frame = -1 Query: 319 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSA-PGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 645 R E+KG ++ L+L V A +HY + KPFFGSL+E+ITS PVVA I EG + R + G T+P + A PGTIRGD + T N++HGSDS ESAQ+EIALWFP Sbjct: 25 RIERKGLAIAALELRNVTEELASQHYAEHEGKPFFGSLLEFITSAPVVAAIVEGPRAIAAFRQLAGGTDPVEKATPGTIRGDFGLETQFNLVHGSDSAESAQREIALWFP 134
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_MYCMM (Nucleoside diphosphate kinase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=ndk PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.129e-26 Identity = 58/110 (52.73%), Postives = 74/110 (67.27%), Query Frame = -1 Query: 319 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSA-PGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 645 R E+KG ++ L+L V A +HY + KPFFGSL+E+ITS PVVA I EG + R + G T+P + A PGTIRGD + T N++HGSDS ESAQ+EIALWFP Sbjct: 25 RIERKGLAIAALELRNVTEELASQHYAEHEGKPFFGSLLEFITSAPVVAAIVEGPRAIAAFRQLAGGTDPVEKATPGTIRGDFGLETQFNLVHGSDSAESAQREIALWFP 134
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_METTH (Nucleoside diphosphate kinase OS=Methanobacterium thermoautotrophicum GN=ndk PE=3 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 2.129e-26 Identity = 58/126 (46.03%), Postives = 84/126 (66.67%), Query Frame = -1 Query: 271 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 645 RFE +G + K++ + A +HY++ KPFF L++YITS PV+AM+ EG+ + R ++GATNPA++ GTIRGD A+ TGRNIIH SDS ESA++EI L+F + I +++ IYE Sbjct: 24 RFEDRGLKIVAFKMLQIPEDLAMEHYQEHREKPFFRDLVDYITSAPVIAMVIEGKDCISLIRKMVGATNPAEADLGTIRGDFALETGRNIIHASDSPESAEREIKLFFDESEICSYEMPDREMIYE 149 The following BLAST results are available for this feature:
BLAST of CN184682 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184682 ID=CN184682; Name=CN184682; organism=Citrus sinensis; type=EST; length=648bpback to top |