CN184682
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_PHEZH (Nucleoside diphosphate kinase OS=Phenylobacterium zucineum (strain HLK1) GN=ndk PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.280e-20 Identity = 52/111 (46.85%), Postives = 69/111 (62.16%), Query Frame = -1 Query: 307 EKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 639 E G + K + + R AEK YE +PFFG L+E++TS PVV + EGE V R ++GATNPAQ+A GTIR A G N +HGSDS+E+A+ EIA +F + I Sbjct: 27 EDAGLRIVAQKRIRMSRAQAEKFYEVHKERPFFGELVEFMTSAPVVVQVLEGENAVARYREVMGATNPAQAADGTIRKLYAESVGENSVHGSDSLENAKIEIAQFFTEDEI 137
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_COXBN (Nucleoside diphosphate kinase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=ndk PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.280e-20 Identity = 48/111 (43.24%), Postives = 69/111 (62.16%), Query Frame = -1 Query: 316 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PD 645 RFEK G + K+ + +P AEK Y +PF+ L++++T GPV+ + EGE + R I+GATNP ++ PGTIR D A N +HGSD E+A++EIA +F PD Sbjct: 26 RFEKAGLKIIAAKMCHLSKPQAEKFYAVHKDRPFYPDLVKFMTQGPVMIQVLEGENAIVKNREIMGATNPKEALPGTIRADFADSIDANAVHGSDGPETAKEEIAFFFKPD 136
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_COXB1 (Nucleoside diphosphate kinase OS=Coxiella burnetii (strain CbuK_Q154) GN=ndk PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.280e-20 Identity = 48/111 (43.24%), Postives = 69/111 (62.16%), Query Frame = -1 Query: 316 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PD 645 RFEK G + K+ + +P AEK Y +PF+ L++++T GPV+ + EGE + R I+GATNP ++ PGTIR D A N +HGSD E+A++EIA +F PD Sbjct: 26 RFEKAGLKIISAKMCHLSKPQAEKFYAVHKDRPFYPDLVKFMTQGPVMIQVLEGENAIVKNREIMGATNPKEALPGTIRADFADSIDANAVHGSDGPETAKEEIAFFFKPD 136
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_BORPD (Nucleoside diphosphate kinase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=ndk PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.280e-20 Identity = 45/110 (40.91%), Postives = 68/110 (61.82%), Query Frame = -1 Query: 316 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 645 RFE G + +L + R AE+ Y +PFF L++++ SGPV + EGEG ++ R ++GAT+P ++APGTIR D A N +HGSD+ E+A E+A +FP+ Sbjct: 26 RFENAGLKVIAARLQQLSRADAERFYAVHKERPFFKDLVDFMVSGPVFVQVLEGEGAIQKNRDLMGATDPKKAAPGTIRADFADSIDANAVHGSDAAETAAVEVAFFFPE 135
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_THEAB (Nucleoside diphosphate kinase OS=Thermosipho africanus (strain TCF52B) GN=ndk PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.977e-20 Identity = 48/113 (42.48%), Postives = 73/113 (64.60%), Query Frame = -1 Query: 307 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 645 RFE++G + LKL+ + + AEK YE K F+ LI+++T GP+VAMI E V++ R IIG T+P ++ GTIRG+ A+ +N+IH SDS E+ ++E ++F D I Sbjct: 24 RFEQRGIKIVALKLLWMSKQQAEKLYEMHKGKSFYNDLIDFVTGGPIVAMIVEAPRVIEMVRHIIGDTDPLKAGTGTIRGEFALTITKNLIHASDSKENFEREYKIFFSDDEI 136
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_RHOCS (Nucleoside diphosphate kinase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=ndk PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.977e-20 Identity = 50/108 (46.30%), Postives = 68/108 (62.96%), Query Frame = -1 Query: 322 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 645 RFE+ G + K + + R AE+ Y + +PF+G L+ ++ SGPVV + EGE V R I+GATNPA +APGTIR D A N +HGSDS+E+A EIA +F Sbjct: 26 RFEEAGLRIVAQKRIRLTREQAEQFYIVHAERPFYGELVSFMISGPVVVQVLEGENAVARNREIMGATNPANAAPGTIRKDFAESIEANSVHGSDSLENAATEIAYFF 133
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_PSEE4 (Nucleoside diphosphate kinase OS=Pseudomonas entomophila (strain L48) GN=ndk PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.977e-20 Identity = 47/108 (43.52%), Postives = 68/108 (62.96%), Query Frame = -1 Query: 322 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 645 RFE+ G + K+ + + AE Y + S++ FFG L+ ++TSGPVV + EGE + R ++GATNP ++APGTIR D A N +HGSDS +A +EIA +F Sbjct: 26 RFEEAGLKIVASKIKQLSKAEAEGFYAEHSARGFFGDLVAFMTSGPVVVQVLEGENAIALNRELMGATNPKEAAPGTIRADFAESIDANAVHGSDSEAAAAREIAYFF 133
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_BDEBA (Nucleoside diphosphate kinase OS=Bdellovibrio bacteriovorus GN=ndk PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.977e-20 Identity = 46/107 (42.99%), Postives = 67/107 (62.62%), Query Frame = -1 Query: 322 FEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 642 FE G + K+ + AE+ Y + ++PFFG L+ ++TSGPV+ M +GEG V R I+GAT+P ++ PGT+R G N +HGSDS ESA +E+AL+F Sbjct: 27 FEANGLKIAAAKITVLTTAKAEEFYAEHKARPFFGELVSFMTSGPVMLMCLQGEGAVLKNREIMGATDPKKANPGTVRAKFGDNVGENAVHGSDSPESAARELALFF 133
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_ALCBS (Nucleoside diphosphate kinase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=ndk PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.977e-20 Identity = 48/110 (43.64%), Postives = 67/110 (60.91%), Query Frame = -1 Query: 316 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 645 RFEK G S+ +K++ + A Y + +PFF L+ ++TSGPVV + EGE V R ++GATNP ++ GTIR D A N +HGSDS ESA +E+A +F D Sbjct: 26 RFEKAGLSVVAMKMVHLSDEKAGGFYAEHKERPFFKDLVGFMTSGPVVVQVLEGEDAVAKNRDLMGATNPKEAEAGTIRADFAETIDANAVHGSDSTESAAREVAYFFSD 135
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK2_PARUW (Nucleoside diphosphate kinase 2 OS=Protochlamydia amoebophila (strain UWE25) GN=ndk2 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.977e-20 Identity = 47/108 (43.52%), Postives = 67/108 (62.04%), Query Frame = -1 Query: 322 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 645 RFEK G + K+ +DR AE Y +PFF L+ ++T+GPV+ M+ EGE + R I+GAT+P ++APGTIR D A N +HGSD+ E+A+ EI +F Sbjct: 26 RFEKAGLRIVAAKMKQLDRKDAEGFYAVHKGRPFFEDLVGFMTTGPVMIMVLEGENAINKNREIMGATDPKKAAPGTIRADFAQTIDENAVHGSDAAETAKTEIEYFF 133 The following BLAST results are available for this feature:
BLAST of CN184682 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184682 ID=CN184682; Name=CN184682; organism=Citrus sinensis; type=EST; length=648bpback to top |