CN184682
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_PSEU5 (Nucleoside diphosphate kinase OS=Pseudomonas stutzeri (strain A1501) GN=ndk PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.663e-20 Identity = 47/108 (43.52%), Postives = 66/108 (61.11%), Query Frame = -1 Query: 322 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 645 RFEK G + K++ + A Y + S + FF L+ ++TSGPV+ + EGE V R ++GATNP ++APGTIR D A+ N +HGSDS SA +EIA +F Sbjct: 26 RFEKAGLRVVASKMVQLSEREAAGFYAEHSERGFFKDLVAFMTSGPVIVQVLEGENAVAKNRELMGATNPKEAAPGTIRADFAVSIDENAVHGSDSEASAAREIAYFF 133
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_METCA (Nucleoside diphosphate kinase OS=Methylococcus capsulatus GN=ndk PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.663e-20 Identity = 46/108 (42.59%), Postives = 64/108 (59.26%), Query Frame = -1 Query: 322 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 645 RFEK G + K+ + R AE Y +PFF L+ ++ SGPV+ + EGE + R ++GATNP +APGTIR D A+ N +HGSD E+A +EIA +F Sbjct: 26 RFEKAGLRIVAAKMAQLSREQAEGFYAVHRERPFFNDLVSFMISGPVMIQVLEGENAIAKNRELMGATNPRDAAPGTIRADFAVSIDENAVHGSDGPETAAQEIAYFF 133
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_HAHCH (Nucleoside diphosphate kinase OS=Hahella chejuensis (strain KCTC 2396) GN=ndk PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.131e-19 Identity = 46/113 (40.71%), Postives = 67/113 (59.29%), Query Frame = -1 Query: 307 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 645 RFEK G + K++ + + AE Y + + FF L+ ++TSGPVV EGE + R ++GATNP ++ PGTIR D A N +HGSDS SA++E+A +F + I Sbjct: 26 RFEKAGLRIVAAKMLHLSQEQAEGFYAEHKERGFFPDLVAFMTSGPVVVQALEGENAIALNRQLMGATNPKEAEPGTIRADFASSIDANAVHGSDSAASAEREVAYFFSENEI 138
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_CHLAB (Nucleoside diphosphate kinase OS=Chlamydophila abortus GN=ndk PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.131e-19 Identity = 48/107 (44.86%), Postives = 66/107 (61.68%), Query Frame = -1 Query: 322 FEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 642 FEK GF + +K++ + AE Y S+PFF L++++ SGPVV M+ EG V R I+GATNP ++APGTIR G N +HGSDS+E+A EI +F Sbjct: 25 FEKSGFRIAAMKMLHLSVKEAEGFYAVHKSRPFFQELVDFMISGPVVVMVLEGNNAVARNREIMGATNPQEAAPGTIRAQFGESIGINAVHGSDSLENAAIEINYFF 131
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_CAMC5 (Nucleoside diphosphate kinase OS=Campylobacter curvus (strain 525.92) GN=ndk PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.131e-19 Identity = 48/108 (44.44%), Postives = 66/108 (61.11%), Query Frame = -1 Query: 322 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 645 RFE G + K + + + A+ Y S +PFF L+E++TSGPVV M+ EGE V R ++GATNP ++A GTIR D A N +HGSDS+E+A EI +F Sbjct: 24 RFESNGLRIAAAKKVKLSKCDAKAFYAVHSERPFFNDLVEFMTSGPVVVMVLEGENAVAKNRELMGATNPKEAAAGTIRADFAESIDANAVHGSDSLENAINEINFFF 131
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_BORA1 (Nucleoside diphosphate kinase OS=Bordetella avium (strain 197N) GN=ndk PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.131e-19 Identity = 44/110 (40.00%), Postives = 68/110 (61.82%), Query Frame = -1 Query: 316 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 645 RFE+ G + +L + R AE+ Y +PFF L++++ SGPV + EGE ++ R ++GAT+P ++APGTIR D A N +HGSD+ E+A E+A +FP+ Sbjct: 26 RFEQAGLKVIAARLQQLSRADAERFYAVHKERPFFKDLVDFMVSGPVFVQVLEGENAIQVNRDLMGATDPKKAAPGTIRADFADSIDANAVHGSDAPETAAVEVAFFFPE 135
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_ACIAD (Nucleoside diphosphate kinase OS=Acinetobacter sp. (strain ADP1) GN=ndk PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.131e-19 Identity = 50/108 (46.30%), Postives = 64/108 (59.26%), Query Frame = -1 Query: 322 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 645 RFEK G +K + + AE Y + + FF L+ ++TSGPVV EGE V R I+GATNP ++APGTIR D A N HGSDSV SA++EIA +F Sbjct: 26 RFEKAGLKPVAMKYKHLSQAEAEGFYAEHKERGFFADLVAFMTSGPVVVSALEGENAVLAHREILGATNPKEAAPGTIRADFATSIDENAAHGSDSVASAEREIAYFF 133
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_VEREI (Nucleoside diphosphate kinase OS=Verminephrobacter eiseniae (strain EF01-2) GN=ndk PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.478e-19 Identity = 45/109 (41.28%), Postives = 67/109 (61.47%), Query Frame = -1 Query: 319 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 645 RFE G + +++ + RP AE+ Y +PFF L+E++ SGPV+ + EGE V R ++GAT+P ++ GTIR D A N +HGSD+ E+AQ E+A +FP Sbjct: 26 RFEAAGLKIVAARMVHLARPEAERFYAVHKERPFFKDLVEFMISGPVMVQVLEGENAVLKNRELMGATDPKKAQTGTIRADFADSIDANAVHGSDAAETAQAEVAFFFP 134
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_PSEMY (Nucleoside diphosphate kinase OS=Pseudomonas mendocina (strain ymp) GN=ndk PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.478e-19 Identity = 47/108 (43.52%), Postives = 66/108 (61.11%), Query Frame = -1 Query: 322 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 645 RFEK G + K++ + A Y + S + FF L+ ++TSGPV+ + EGE V R ++GATNP ++APGTIR D A+ N +HGSDS SA +EIA +F Sbjct: 26 RFEKAGLRVVASKMVQLSEREAAGFYAEHSERGFFKDLVAFMTSGPVIVQVLEGEDAVLKNRELMGATNPKEAAPGTIRADFAVSIDENAVHGSDSEASAAREIAYFF 133
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_CAMHC (Nucleoside diphosphate kinase OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=ndk PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.930e-19 Identity = 47/108 (43.52%), Postives = 66/108 (61.11%), Query Frame = -1 Query: 322 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 645 RFE G + K + + + A + Y + FF L++Y+TSGPVV M+ EGE V R ++GAT+P ++APGTIR D A N +HGSDS E+A+ EIA +F Sbjct: 24 RFESAGLRIAAAKKIKLSKCDASQFYAIHKERSFFNDLVDYMTSGPVVVMVLEGENAVAKNRELMGATDPKKAAPGTIRADFAESIDANAVHGSDSEENAKNEIAFFF 131 The following BLAST results are available for this feature:
BLAST of CN184682 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184682 ID=CN184682; Name=CN184682; organism=Citrus sinensis; type=EST; length=648bpback to top |