CN184682
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_CAMJ8 (Nucleoside diphosphate kinase OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=ndk PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.615e-19 Identity = 47/113 (41.59%), Postives = 66/113 (58.41%), Query Frame = -1 Query: 307 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 645 RFE G + +K + + + AE Y +PFF L+E++ SGPVV + EGEG V R ++GATNP ++ GTIR D A N +HGSDS+E+A+ EI +F I Sbjct: 24 RFESNGLRIAAMKKVQLSKEQAENFYAVHKERPFFKDLVEFMISGPVVVSVLEGEGAVLKNRDLMGATNPKEAKAGTIRADFAESIDANAVHGSDSLENAKIEIDFFFKPNEI 136
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_BRUME (Nucleoside diphosphate kinase OS=Brucella melitensis GN=ndk PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.615e-19 Identity = 45/108 (41.67%), Postives = 65/108 (60.19%), Query Frame = -1 Query: 322 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 645 + E+ G + K + + R AE Y +PFFG L+E+++SGP V + EGE + R ++GATNPA + GTIR A+ G N +HGSD+ E+A +EIA WF Sbjct: 26 KLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKAFALSIGENSVHGSDAPETAAEEIAYWF 133
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_VIBHB (Nucleoside diphosphate kinase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=ndk PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.334e-19 Identity = 46/113 (40.71%), Postives = 67/113 (59.29%), Query Frame = -1 Query: 307 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 645 R EK G + K++ + A Y + KPFF +L E++TSGP++ + EGE + R ++G TNP ++A GTIR D A+ N +HGSDS ESA +EI +FP+ I Sbjct: 26 RIEKAGLRIVAAKMVHLTEEQASGFYAEHEGKPFFPALKEFMTSGPIMVQVLEGEDAIARYRELMGKTNPEEAACGTIRADYALSMRHNSVHGSDSPESAAREIEFFFPESEI 138
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_THIDA (Nucleoside diphosphate kinase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=ndk PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.334e-19 Identity = 46/109 (42.20%), Postives = 65/109 (59.63%), Query Frame = -1 Query: 319 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 645 RFE G + K+ + R AE Y +PFF L++++ SGPVV + EGE + RT++GAT+P ++ PGTIR D A N +HGSD+ E+A EIA +FP Sbjct: 26 RFETNGLKVVASKMKHLSRQEAEGFYAVHKDRPFFKDLVDFMVSGPVVLQVLEGEDAIAKNRTLMGATDPKKAEPGTIRADFAESIDANAVHGSDAPETAAVEIAYFFP 134
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_PSYA2 (Nucleoside diphosphate kinase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=ndk PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.334e-19 Identity = 46/108 (42.59%), Postives = 64/108 (59.26%), Query Frame = -1 Query: 322 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 645 RFEK G + K+M +D A Y + + +PF+ L ++ SGPV+ + EGE + R I+GATNP +A GTIR D A N +HGSDS ESA +EI+ +F Sbjct: 26 RFEKSGLKIVAAKMMQLDDEKAGGFYAEHAERPFYNDLKSFMMSGPVLVSVLEGENAIAKHREIMGATNPKDAAEGTIRADFASSIDENAVHGSDSAESAAREISYFF 133
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_PSEFS (Nucleoside diphosphate kinase OS=Pseudomonas fluorescens (strain SBW25) GN=ndk PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.334e-19 Identity = 46/108 (42.59%), Postives = 66/108 (61.11%), Query Frame = -1 Query: 322 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 645 RFEK G + KL + + AE Y + S++ FFG L+ ++ SGPVV + EGE + R ++GATNP ++A GTIR D A N +HGSDS +A +EI+ +F Sbjct: 26 RFEKAGLKVVASKLKQLSKAEAEGFYAEHSARGFFGDLVAFMISGPVVVQVLEGENAIALNRELMGATNPKEAAAGTIRADFAESIDANAVHGSDSEAAAAREISYFF 133
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_PSEF5 (Nucleoside diphosphate kinase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=ndk PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.334e-19 Identity = 46/108 (42.59%), Postives = 66/108 (61.11%), Query Frame = -1 Query: 322 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 645 RFE+ G + K+ + + AE Y + S + FFG L+ ++TSGPVV + EGE + R ++GATNP ++A GTIR D A N +HGSDS +A +EIA +F Sbjct: 26 RFEEAGLRVVASKMKQLSKAEAEGFYAEHSERGFFGELVAFMTSGPVVVQVLEGENAIVRNRELMGATNPKEAAAGTIRADFAESIDANAVHGSDSEAAAAREIAYFF 133
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_NEIG2 (Nucleoside diphosphate kinase OS=Neisseria gonorrhoeae (strain NCCP11945) GN=ndk PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.334e-19 Identity = 45/108 (41.67%), Postives = 65/108 (60.19%), Query Frame = -1 Query: 322 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 645 RFE+ G + K+ + A++ Y +PF+ L+E++T GPV+ + EGE V R ++GATNP ++A GTIR D A N +HGSDSVE+A EIA +F Sbjct: 26 RFEENGLKIVAAKMKQLTLKEAQEFYAVHKDRPFYAGLVEFMTGGPVMIQVLEGENAVLKNRELMGATNPTEAAEGTIRADFATSVSINAVHGSDSVENAALEIAYFF 133
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_METS4 (Nucleoside diphosphate kinase OS=Methylobacterium sp. (strain 4-46) GN=ndk PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.334e-19 Identity = 46/111 (41.44%), Postives = 68/111 (61.26%), Query Frame = -1 Query: 307 EKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 639 E+ G + + + + A+ YE + +PF+G L+ ++TSGPVV + EG+ V R ++GATNPAQ+A GTIR A+ G N +HGSDS E+A EIA +F + I Sbjct: 28 EEAGLRIVAQRRIRMSEAQAKTFYEVHAERPFYGELVSFMTSGPVVVQVLEGDNAVAKYREVMGATNPAQAAEGTIRKRFAVSVGENSVHGSDSAENAAIEIAQFFTEADI 138
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_BURP8 (Nucleoside diphosphate kinase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=ndk PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.334e-19 Identity = 44/110 (40.00%), Postives = 68/110 (61.82%), Query Frame = -1 Query: 316 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 645 RFE G + +++ + R AEK Y +++PFF L+E++ SGPV + EGEG + R ++GAT+P ++ GTIR D A N +HGSD+ E+A E+A +FP+ Sbjct: 26 RFENAGLKIVASRMVHLSRADAEKFYAVHAARPFFKDLVEFMISGPVQVQVLEGEGAILKNRDLMGATDPKKAEKGTIRADFADSIDANAVHGSDAPETAAVEVAFFFPE 135 The following BLAST results are available for this feature:
BLAST of CN184682 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184682 ID=CN184682; Name=CN184682; organism=Citrus sinensis; type=EST; length=648bpback to top |