CN184682
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_PROM1 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain NATL1A) GN=ndk PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 8.071e-34 Identity = 68/126 (53.97%), Postives = 87/126 (69.05%), Query Frame = -1 Query: 271 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 645 RFE KGF L GLK +T + AEKHY +PFF L+++ITSGPVVAM+WEGEGV+ + R +IGAT P ++ PGTIRGDLA+ GRN+IHGSD ++A EI LWF + ++W S W E Sbjct: 26 RFETKGFKLVGLKQLTPSKELAEKHYGVHKDRPFFSGLVDFITSGPVVAMVWEGEGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDGSDTAVFEINLWFQENELVDWNPSDQAWRVE 151
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_OCEIH (Nucleoside diphosphate kinase OS=Oceanobacillus iheyensis GN=ndk PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 8.071e-34 Identity = 66/125 (52.80%), Postives = 87/125 (69.60%), Query Frame = -1 Query: 274 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIY 645 RFE KG+ L G KLM V AE HY + +PFFG L+++ITSGPV AM+WEGE V+ T R ++G TNP ++ P TIRGD I G+NIIHGSDS ESA++EI L+F + I +++ + WIY Sbjct: 24 RFETKGYKLAGAKLMQVSNQLAETHYSEHKERPFFGELVDFITSGPVFAMVWEGENVIATARKMMGKTNPLEADPSTIRGDFGISVGKNIIHGSDSAESAEREITLFFTENEIVSYEKQANNWIY 148
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_PROMT (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain NATL2A) GN=ndk PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.054e-33 Identity = 67/126 (53.17%), Postives = 87/126 (69.05%), Query Frame = -1 Query: 271 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 645 RFE KGF L GLK +T + AEKHY +PFF L+++ITSGPV+AM+WEGEGV+ + R +IGAT P ++ PGTIRGDLA+ GRN+IHGSD ++A EI LWF + ++W S W E Sbjct: 26 RFETKGFKLVGLKQLTPSKELAEKHYGVHKDRPFFSGLVDFITSGPVIAMVWEGEGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDGSDTAVFEINLWFQENELVDWNPSDQAWRVE 151
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_BACHD (Nucleoside diphosphate kinase OS=Bacillus halodurans GN=ndk PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.054e-33 Identity = 66/124 (53.23%), Postives = 89/124 (71.77%), Query Frame = -1 Query: 277 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWI 645 RFEKKGF+L G KLMTV + AE HY + +PFFG L+++ITSGPV AM+WEGE V+ T R ++GATNPA + PGTIRGD + N+IHGSDS ESA++EI ++F +N + ++ W+ Sbjct: 24 RFEKKGFTLIGAKLMTVTKEQAETHYAEHKERPFFGELVDFITSGPVFAMVWEGENVIATARKMMGATNPADAEPGTIRGDFGVQVAMNVIHGSDSPESAKREIDIFFDSSELNEYDKVVNRWV 147
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK3_MOUSE (Nucleoside diphosphate kinase 3 OS=Mus musculus GN=Nme3 PE=2 SV=3) HSP 1 Score: 143.28 bits (360), Expect = 1.054e-33 Identity = 65/126 (51.59%), Postives = 87/126 (69.05%), Query Frame = -1 Query: 271 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 645 RFE+KGF L LKL+ +HY +L KPF+ L++Y++SGPVVAM+W+G VV R +IGAT+P + PGTIRGD + G+N+IHGSDSVESA +EIALWF + + W+ S W+YE Sbjct: 44 RFERKGFKLVALKLVQASEELLREHYVELREKPFYSRLVKYMSSGPVVAMVWQGLDVVHASRALIGATDPGDAMPGTIRGDFCMEVGKNVIHGSDSVESAHREIALWFREAELLCWEDSAGHWLYE 169
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_DESRM (Nucleoside diphosphate kinase OS=Desulfotomaculum reducens (strain MI-1) GN=ndk PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.067e-33 Identity = 66/126 (52.38%), Postives = 94/126 (74.60%), Query Frame = -1 Query: 271 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 645 +FE+KG+ + GLK+M + R AE+HY + + KPFF L+++ITSGPVVAM+ EG+ VV T R ++GATNP ++APGTIR + GRNIIHGSDS+ESAQ+EI ++F + I++ ++ WIYE Sbjct: 24 KFEQKGYKIVGLKMMQISREVAERHYGEHAGKPFFNGLVDFITSGPVVAMVIEGKDVVTTAREMMGATNPLKAAPGTIRATFGVDVGRNIIHGSDSLESAQREIGIFFKSEELIDYDRAIDTWIYE 149
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_PROMS (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain AS9601) GN=ndk PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.006e-33 Identity = 67/123 (54.47%), Postives = 88/123 (71.54%), Query Frame = -1 Query: 280 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPW 645 RFEKKGF L GLK + + A+ HY +PFFG L+++I+SGPVVAM+WEGEGV+ + R +IGAT P ++ PGTIRGDLAI GRNIIHGSD ++A+ EI LWF + + W++S W Sbjct: 26 RFEKKGFKLVGLKQLIPSKELAQNHYGVHRERPFFGDLVDFISSGPVVAMVWEGEGVILSARKLIGATKPLEAEPGTIRGDLAIDIGRNIIHGSDGEDTAKFEINLWFNEEELCEWETSDSKW 148
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_PROMP (Nucleoside diphosphate kinase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=ndk PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.231e-33 Identity = 70/123 (56.91%), Postives = 87/123 (70.73%), Query Frame = -1 Query: 280 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPW 645 RFEKKGF L GLK + + A+ HY +PFF L+E+I+SGPVVAMIWEGEGV+ + R +IGAT P ++ PGTIRGDLAI GRNIIHGSD E+A+ EI LWF I +W++S W Sbjct: 26 RFEKKGFKLVGLKQLIPTKQLAQDHYGVHRERPFFKDLVEFISSGPVVAMIWEGEGVILSARKLIGATKPLEAEPGTIRGDLAIDIGRNIIHGSDGEETAKFEINLWFNQDEICDWETSDSEW 148
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_PROM2 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9215) GN=ndk PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.231e-33 Identity = 67/123 (54.47%), Postives = 88/123 (71.54%), Query Frame = -1 Query: 280 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPW 645 RFEKKGF L GLK + + A+ HY +PFFG L+++I+SGPVVAM+WEGEGV+ + R +IGAT P ++ PGTIRGDLAI GRNIIHGSD ++A+ EI LWF + + W++S W Sbjct: 26 RFEKKGFKLVGLKQLIPSKDLAQNHYGVHRERPFFGDLVDFISSGPVVAMVWEGEGVILSARKLIGATKPLEAEPGTIRGDLAIDIGRNIIHGSDGEDTAKFEIDLWFNEEELCEWETSDAKW 148
BLAST of CN184682 vs. ExPASy Swiss-Prot
Match: NDK_PROM5 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9515) GN=ndk PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 6.832e-33 Identity = 71/126 (56.35%), Postives = 87/126 (69.05%), Query Frame = -1 Query: 271 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 645 RFEKKGF L GLK + + A+ HY +PFF L+ +I+SGPVVAMIWEGEGV+ + R IIGAT P ++ PGTIRGDLAI GRNIIHGSD E+A+ EI LWF I +W++S W E Sbjct: 26 RFEKKGFKLVGLKQLIPSKQLAQDHYGVHRERPFFKDLVNFISSGPVVAMIWEGEGVILSARKIIGATKPLEAEPGTIRGDLAIDIGRNIIHGSDGEETAKFEINLWFDQHEICDWETSDSEWRVE 151 The following BLAST results are available for this feature:
BLAST of CN184682 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184682 ID=CN184682; Name=CN184682; organism=Citrus sinensis; type=EST; length=648bpback to top |