CN184679
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184679 vs. ExPASy Swiss-Prot
Match: VATL_MAIZE (V-type proton ATPase 16 kDa proteolipid subunit (Fragment) OS=Zea mays PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 7.671e-16 Identity = 41/43 (95.35%), Postives = 41/43 (95.35%), Query Frame = 1 Query: 151 VPVVMAGVLGIYGLIIAVIISTGINHKAKSYYLFDGYAHLSSG 279 VPVVMAGVLGIYGLIIAVIISTGIN KAK YYLFDGYAHLSSG Sbjct: 1 VPVVMAGVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHLSSG 43
BLAST of CN184679 vs. ExPASy Swiss-Prot
Match: VATL_BOVIN (V-type proton ATPase 16 kDa proteolipid subunit OS=Bos taurus GN=ATP6V0C PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.671e-16 Identity = 36/65 (55.38%), Postives = 50/65 (76.92%), Query Frame = 1 Query: 58 SCMGAAYGTSKSGVGVTSMGVMRPELMMNSIVPVVMAGVLGIYGLIIAVIISTGINHKAKSYYLF 252 S +GAAYGT+KSG G+ +M VMRPE++M SI+PVVMAG++ IYGL++AV+I+ +N Y F Sbjct: 26 SALGAAYGTAKSGTGIAAMSVMRPEMIMKSIIPVVMAGIIAIYGLVVAVLIANSLNDGISLYRSF 90
BLAST of CN184679 vs. ExPASy Swiss-Prot
Match: VATL2_SCHPO (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Schizosaccharomyces pombe GN=vma11 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.671e-16 Identity = 35/74 (47.30%), Postives = 56/74 (75.68%), Query Frame = 1 Query: 58 SCMGAAYGTSKSGVGVTSMGVMRPELMMNSIVPVVMAGVLGIYGLIIAVIISTGINHKAKSYYLFDGYAHLSSG 279 SC+GA YGT+ +G G+ ++G RPE++M S++PVVM+G++G+YGL+++V+I+ G Y LF G+ HLS+G Sbjct: 25 SCLGAGYGTALAGRGIAAVGAFRPEIVMKSLIPVVMSGIIGVYGLVMSVLIA-GDMSPDNDYSLFSGFIHLSAG 97
BLAST of CN184679 vs. ExPASy Swiss-Prot
Match: VATL_RAT (V-type proton ATPase 16 kDa proteolipid subunit OS=Rattus norvegicus GN=Atp6v0c PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.308e-15 Identity = 37/65 (56.92%), Postives = 49/65 (75.38%), Query Frame = 1 Query: 58 SCMGAAYGTSKSGVGVTSMGVMRPELMMNSIVPVVMAGVLGIYGLIIAVIISTGINHKAKSYYLF 252 S MGAAYGT+KSG G+ +M VMRPEL+M SI+PVVMAG++ IYGL++AV+I+ + Y F Sbjct: 26 SAMGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIANSLTDGITLYRSF 90
BLAST of CN184679 vs. ExPASy Swiss-Prot
Match: VATL_MOUSE (V-type proton ATPase 16 kDa proteolipid subunit OS=Mus musculus GN=Atp6v0c PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.308e-15 Identity = 37/65 (56.92%), Postives = 49/65 (75.38%), Query Frame = 1 Query: 58 SCMGAAYGTSKSGVGVTSMGVMRPELMMNSIVPVVMAGVLGIYGLIIAVIISTGINHKAKSYYLF 252 S MGAAYGT+KSG G+ +M VMRPEL+M SI+PVVMAG++ IYGL++AV+I+ + Y F Sbjct: 26 SAMGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIANSLTDGITLYRSF 90
BLAST of CN184679 vs. ExPASy Swiss-Prot
Match: VATL_HUMAN (V-type proton ATPase 16 kDa proteolipid subunit OS=Homo sapiens GN=ATP6V0C PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.709e-15 Identity = 36/65 (55.38%), Postives = 49/65 (75.38%), Query Frame = 1 Query: 58 SCMGAAYGTSKSGVGVTSMGVMRPELMMNSIVPVVMAGVLGIYGLIIAVIISTGINHKAKSYYLF 252 S +GAAYGT+KSG G+ +M VMRPE +M SI+PVVMAG++ IYGL++AV+I+ +N Y F Sbjct: 26 SALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAGIIAIYGLVVAVLIANSLNDDISLYKSF 90
BLAST of CN184679 vs. ExPASy Swiss-Prot
Match: VATL_CANTR (V-type proton ATPase 16 kDa proteolipid subunit OS=Candida tropicalis GN=VMA3 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.447e-14 Identity = 33/74 (44.59%), Postives = 55/74 (74.32%), Query Frame = 1 Query: 58 SCMGAAYGTSKSGVGVTSMGVMRPELMMNSIVPVVMAGVLGIYGLIIAVIISTGINHKAKSYYLFDGYAHLSSG 279 +C GA+YGT+KSGVG+ + V RP+L++ ++VPVVMAG++ IYGL+++V++S ++ K L+ G+ L +G Sbjct: 24 TCFGASYGTAKSGVGICATSVTRPDLLVKNVVPVVMAGIIAIYGLVVSVLVSDSLSQKQA---LYTGFIQLGAG 94
BLAST of CN184679 vs. ExPASy Swiss-Prot
Match: VATL2_NEUCR (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Neurospora crassa GN=vma-11 PE=2 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 2.468e-14 Identity = 33/73 (45.21%), Postives = 53/73 (72.60%), Query Frame = 1 Query: 67 GAAYGTSKSGVGVTSMGVMRPELMMNSIVPVVMAGVLGIYGLIIAVIIS--TGINHKAKSYYLFDGYAHLSSG 279 GAAYGT+KSG+G+ +G RP+L+M ++PVVM+G++ +Y L++AV+I+ G + Y LF+G+ HL+ G Sbjct: 33 GAAYGTAKSGIGIAGVGTFRPDLIMKCLIPVVMSGIIAVYALVVAVLIAQDLGPPGSGQHYSLFNGFMHLACG 105
BLAST of CN184679 vs. ExPASy Swiss-Prot
Match: VATL_DICDI (V-type proton ATPase proteolipid subunit OS=Dictyostelium discoideum GN=vatP PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.209e-14 Identity = 36/72 (50.00%), Postives = 53/72 (73.61%), Query Frame = 1 Query: 64 MGAAYGTSKSGVGVTSMGVMRPELMMNSIVPVVMAGVLGIYGLIIAVIISTGINHKAKSYYLFDGYAHLSSG 279 MGAAYGT+K+ VG+++MGVM+P+L++ + +PV+ AGV+ IYGLII VI+ GI A +Y L + L +G Sbjct: 45 MGAAYGTAKASVGISNMGVMKPDLVIKAFIPVIFAGVIAIYGLIICVILVGGIKPNA-NYTLMKSFTDLGAG 115
BLAST of CN184679 vs. ExPASy Swiss-Prot
Match: VATL1_CAEEL (V-type proton ATPase 16 kDa proteolipid subunit 1 OS=Caenorhabditis elegans GN=vha-1 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.209e-14 Identity = 32/71 (45.07%), Postives = 52/71 (73.24%), Query Frame = 1 Query: 67 GAAYGTSKSGVGVTSMGVMRPELMMNSIVPVVMAGVLGIYGLIIAVIISTGINHKAKSYYLFDGYAHLSSG 279 G+AYGT+K+G G+ SM V RP+L+M +I+PVVMAG++ IYGL++AVI+S + +Y + + ++ + G Sbjct: 40 GSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIYGLVVAVIVSGKVEPAGANYTINNAFSQFAGG 110 The following BLAST results are available for this feature:
BLAST of CN184679 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184679 ID=CN184679; Name=CN184679; organism=Citrus sinensis; type=EST; length=280bpback to top |