CN184673

Overview
NameCN184673
Unique NameCN184673
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length710
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184673 vs. ExPASy Swiss-Prot
Match: HSD_STREX (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Streptomyces exfoliatus PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.179e-13
Identity = 54/155 (34.84%), Postives = 76/155 (49.03%), Query Frame = 1
Query:  130 GAHIVIADILDELGAALADTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGXXXXXXXXXXXMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISP 588
            GA +V+AD+LDE GAA A  +G   RY H DVT EED +  V  A    G +D + NNA            ++E  + ++ +NL G+  G+K    AM +    G           MG   + +Y  SK  + GL++  A ELG   IRVN + P
Sbjct:   30 GARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETE-SVERFRKVVDINLTGVFIGMKTVIPAMKDAGG-GSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHP 182          
BLAST of CN184673 vs. ExPASy Swiss-Prot
Match: UCPA_ECOLI (Oxidoreductase ucpA OS=Escherichia coli (strain K12) GN=ucpA PE=1 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 5.423e-13
Identity = 57/199 (28.64%), Postives = 91/199 (45.73%), Query Frame = 1
Query:   49 RLMGKVALXXXXXXXXXXXXXKLFAENGAHIVIADILDELGAALADTIGGRYIHC-----DVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGXXXXXXXXXXXMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRK 630
            +L GK AL             + FA +GA++++ DI  E+   LAD + GR   C     DV     V +A++ A   +G++DI+ NNA           ++ +D  F + +N+ G+ +  K     MI  +              +      AY+L+K AI+GL +S A E  + GIRVN I P  V + M  +  R+
Sbjct:    3 KLTGKTALITGALQGIGEGIARTFARHGANLILLDISPEI-EKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLD-MSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQ 199          
BLAST of CN184673 vs. ExPASy Swiss-Prot
Match: UCPA_ECO57 (Oxidoreductase ucpA OS=Escherichia coli O157:H7 GN=ucpA PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.423e-13
Identity = 57/199 (28.64%), Postives = 91/199 (45.73%), Query Frame = 1
Query:   49 RLMGKVALXXXXXXXXXXXXXKLFAENGAHIVIADILDELGAALADTIGGRYIHC-----DVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGXXXXXXXXXXXMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRK 630
            +L GK AL             + FA +GA++++ DI  E+   LAD + GR   C     DV     V +A++ A   +G++DI+ NNA           ++ +D  F + +N+ G+ +  K     MI  +              +      AY+L+K AI+GL +S A E  + GIRVN I P  V + M  +  R+
Sbjct:    3 KLTGKTALITGALQGIGEGIARTFARHGANLILLDISPEI-EKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLD-MSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQ 199          
BLAST of CN184673 vs. ExPASy Swiss-Prot
Match: BACC2_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.250e-13
Identity = 50/160 (31.25%), Postives = 77/160 (48.12%), Query Frame = 1
Query:  118 FAENGAHIVIADILDELGAALADTIGG---RYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGXXXXXXXXXXXMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISP 588
            F    A++V+ADI +  G A+          ++H D+T E   ++A+R AV   G LD++ NNA           + + +   +L+VNL G+    KHA K M++   KG           +      AY+ SK  ++ L RS A +  KH IRVNC+ P
Sbjct:   25 FLNQQANVVVADIDEAQGEAMIRKENNDRLHFVHTDITDEPACQNAIRSAVDKFGGLDVLINNAGIEIVAPIHE-MELSNWNKVLNVNLTGMFLMSKHALKYMLKSG-KGNIINTCSVGGVVAWPDIPAYNASKGGVLQLTRSMAVDYAKHNIRVNCVCP 182          
BLAST of CN184673 vs. ExPASy Swiss-Prot
Match: DHSO_RHOSH (Sorbitol dehydrogenase OS=Rhodobacter sphaeroides GN=polS PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.578e-12
Identity = 57/188 (30.32%), Postives = 79/188 (42.02%), Query Frame = 1
Query:   49 RLMGKVALXXXXXXXXXXXXXKLFAENGAHIVIADILDELGAALADTIGGRY--IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGXXXXXXXXXXXMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSE 606
            RL GK AL             + +   GA + IADI  E   A A  IG     I  DVT +  ++  V   +   G +DI+ NNA           +  E    L ++N++G L  ++  A+AMI G R G            G      Y  +K A+I L +S    L +HGI VN I+P  V  E
Sbjct:    2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVE-ITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGE 188          
BLAST of CN184673 vs. ExPASy Swiss-Prot
Match: LIMC_RHOER ((-)-trans-carveol dehydrogenase OS=Rhodococcus erythropolis GN=limC PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.061e-12
Identity = 59/207 (28.50%), Postives = 85/207 (41.06%), Query Frame = 1
Query:   49 RLMGKVALXXXXXXXXXXXXXKLFAENGAHIVIADI-------------LDELGAALADTIG-GR---YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGXXXXXXXXXXXMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVN 618
            R+ G+VAL                AE GA +++ D+              DEL     D    GR    IH DV   E + + V  AVS  G+LDI+  NA           +     + ++ +NL G+ H  K A   ++ G+R G            G      YS +K  ++GL RS A EL  H +RVN + P  V + M+ N
Sbjct:    3 RVEGQVALITGAARGQGRSHAIKLAEEGADVILVDVPNDVVDIGYPLGTADELDQTAKDVENLGRKAIVIHADVRDLESLTAEVDRAVSTLGRLDIVSANAGIASVPFLSHDIPDNTWRQMIDINLTGVWHTAKVAVPHILAGERGGSIVLTSSAAGLKGYAQISHYSAAKHGVVGLMRSLALELAPHRVRVNSLHPTQVNTPMIQN 209          
BLAST of CN184673 vs. ExPASy Swiss-Prot
Match: CBR4_XENTR (Carbonyl reductase family member 4 OS=Xenopus tropicalis GN=cbr4 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.691e-12
Identity = 50/178 (28.09%), Postives = 84/178 (47.19%), Query Frame = 1
Query:  112 KLFAENGAHIVIADILDELGAALADTIGGRY-IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGXXXXXXXXXXXMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGK 642
            KL A+    + +     E+  A A  +G    + CDV+KE +++   +   +  G +D + N+A            + ED++ LLSVNL G +   K A ++MI+ Q+ G            G +    Y  SKE +IG ++S A E+ K  IRVN ++P  + ++M +      L K
Sbjct:   20 KLLAQRDYKVAVISRDLEVAKAAAAEVGAHLALSCDVSKENEIQDTFKEITNNLGNVDYLVNSAGIRRDALLLRTRS-EDIRSLLSVNLVGTIQTCKLALRSMIQ-QQGGAIVNIGSIVGHKGNIGQSIYGASKEGLIGFSKSLAKEVAKRNIRVNVVAPGFIHTDMTLGLEEDSLTK 195          
BLAST of CN184673 vs. ExPASy Swiss-Prot
Match: DHB14_BOVIN (17-beta-hydroxysteroid dehydrogenase 14 OS=Bos taurus GN=HSD17B14 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.023e-11
Identity = 50/184 (27.17%), Postives = 83/184 (45.11%), Query Frame = 1
Query:   49 RLMGKVALXXXXXXXXXXXXXKLFAENGAHIVIADILDELGAALADTIGGR-YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGXXXXXXXXXXXMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGV 597
            R  GKV +             + F E+GA +VI D  +  G A+   + G  ++ CDVT+EEDV + V   +   G+LD + NNA            + +  + LL +NL G     K A   +   + +G           +G   +  Y  +K A+  + ++ A +  ++G+RVNCISP  +
Sbjct:    6 RYAGKVVIVTGGGRGIGAGIVRAFVESGAQVVICDKDEARGRAVERELPGTVFLLCDVTREEDVRTLVSETIRRFGRLDCIVNNAGYHPPPQWPEETSAQGFRQLLELNLLGTYTLTKLALPHL--RKSRGNVINISSLVGAIGQSQAVPYVATKGAVTAMTKALALDESQYGVRVNCISPGNI 187          
BLAST of CN184673 vs. ExPASy Swiss-Prot
Match: CBR4_XENLA (Carbonyl reductase family member 4 OS=Xenopus laevis GN=cbr4 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.023e-11
Identity = 50/178 (28.09%), Postives = 81/178 (45.51%), Query Frame = 1
Query:  112 KLFAENGAHIVIADILDELGAALADTIGGRY-IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGXXXXXXXXXXXMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGK 642
            KL A+    + +     E+  A    IG    + CDV+KE +++   +   +  G +D + N+A            + ED+  LLS+NL G +   K A K MI+ Q+ G            G +    Y  SKE +IG ++S A E+ K  IRVN ++P  + ++M  +     L K
Sbjct:   20 KLLAQKDYKVAVISRNLEVAQAAVTEIGAHLALSCDVSKENEIQCTFKEIKNNLGNIDYLVNSAGISRDALLLRTRS-EDIMSLLSINLVGTIQTCKVALKGMIQ-QQGGSIVNIGSIVGHKGNIGQSIYGASKEGLIGFSKSLAKEVAKRNIRVNVVAPGFIRTDMTSDLKEDSLNK 195          
BLAST of CN184673 vs. ExPASy Swiss-Prot
Match: DHB14_HUMAN (17-beta-hydroxysteroid dehydrogenase 14 OS=Homo sapiens GN=HSD17B14 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.336e-11
Identity = 51/184 (27.72%), Postives = 82/184 (44.57%), Query Frame = 1
Query:   49 RLMGKVALXXXXXXXXXXXXXKLFAENGAHIVIADILDELGAALADTIGGR-YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGXXXXXXXXXXXMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGV 597
            R  GKV +             + F  +GA +VI D  +  G AL   + G  +I CDVT+E+DV++ V   +   G+LD + NNA            + +  + LL +NL G     K A   + + Q  G           +G   +  Y  +K A+  + ++ A +   +G+RVNCISP  +
Sbjct:    6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ--GNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNI 187          
The following BLAST results are available for this feature:
BLAST of CN184673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
HSD_STREX3.179e-1334.843-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]
UCPA_ECOLI5.423e-1328.64Oxidoreductase ucpA OS=Escherichia coli (strain K1... [more]
UCPA_ECO575.423e-1328.64Oxidoreductase ucpA OS=Escherichia coli O157:H7 GN... [more]
BACC2_BACSU9.250e-1331.25Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
DHSO_RHOSH1.578e-1230.32Sorbitol dehydrogenase OS=Rhodobacter sphaeroides ... [more]
LIMC_RHOER2.061e-1228.50(-)-trans-carveol dehydrogenase OS=Rhodococcus ery... [more]
CBR4_XENTR2.691e-1228.09Carbonyl reductase family member 4 OS=Xenopus trop... [more]
DHB14_BOVIN1.023e-1127.1717-beta-hydroxysteroid dehydrogenase 14 OS=Bos tau... [more]
CBR4_XENLA1.023e-1128.09Carbonyl reductase family member 4 OS=Xenopus laev... [more]
DHB14_HUMAN1.336e-1127.7217-beta-hydroxysteroid dehydrogenase 14 OS=Homo sa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005N24_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184673 ID=CN184673; Name=CN184673; organism=Citrus sinensis; type=EST; length=710bp
GAGGACGAAATGGAGGCACGTGATGACACAAACAAGTTATCTTCAAAGAG
ATTGATGGGCAAAGTTGCTTTGATAACTGGCGGAGCAAGAGGGATTGGAG
CAGCCACTGCTAAACTATTTGCGGAGAATGGTGCGCACATTGTCATAGCA
GACATTCTTGATGAACTCGGCGCTGCTCTAGCCGACACAATAGGCGGCCG
GTACATACATTGCGACGTGACAAAGGAAGAAGATGTTGAATCAGCTGTCC
GGCTTGCAGTTTCCTGGAAAGGCCAGTTAGACATAATGTTCAACAATGCT
GGAATTTCTGGCTCTGGAGGCAGCATCACAAGCCTTAACATGGAAGATGT
GAAGTTTCTTCTCTCAGTTAATCTGAATGGCATATTACATGGAATCAAGC
ATGCGGCGAAGGCCATGATCGAAGGCCAGAGAAAAGGCAGTATTATCTGC
AGTTCTAGCTCTGCAGCCATCATGGGCGGCCTTGCATCCCATGCCTATTC
GTTGTCAAAAGAGGCAATCATTGGCTTGGCAAGAAGCACAGCCTGCGAGC
TGGGCAAGCATGGAATTCGAGTGAACTGCATCTCGCCTCATGGAGTTCCT
TCAGAGATGCTTGTGAATGCCTACAGAAAGTACCTGGGGAAAAGCTGATA
TGAAACCTGAAGAAGTGAGCAAGATGGTGGGAGAGAGTGGAAGTTTGCTG
CGTGGGAGGA
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