CN184673

Overview
NameCN184673
Unique NameCN184673
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length710
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184673 vs. ExPASy Swiss-Prot
Match: Y325_THEMA (Uncharacterized oxidoreductase TM_0325 OS=Thermotoga maritima GN=TM_0325 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.744e-11
Identity = 62/191 (32.46%), Postives = 86/191 (45.03%), Query Frame = 1
Query:   58 GKVALXXXXXXXXXXXXXKLFAENGAHIVIADILDELG---AALADTIGGR--YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGXXXXXXXXXXXMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLV 615
            GKV L              +FAE GA + I DI +E G     L  ++GG   +I  DV K  D E  V+  V   G+LDI+ NNA            + ED    ++VN+ G     K+A + M + Q  G           +G      YS+SK A++GL RS A +   +GIRVN + P    SE L+
Sbjct:    5 GKVVLITGAGSGIGKKAAVMFAERGAKVAINDISEEKGKETVELIKSMGGEAAFIFGDVAK--DAEQIVKKTVETFGRLDILVNNAGIVPYGNIEET-SEEDFDKTMAVNVKGPFLLSKYAVEQM-KKQGGGVIVNVSSEAGLIGIPRRCVYSVSKAALLGLTRSLAVDYVDYGIRVNAVCPGTTQSEGLM 191          
BLAST of CN184673 vs. ExPASy Swiss-Prot
Match: BACC_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 8.658e-11
Identity = 51/164 (31.10%), Postives = 75/164 (45.73%), Query Frame = 1
Query:  118 FAENGAHIVIADILDELGAALADTIGGRYIH---CDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGXXXXXXXXXXXMGGLASH----AYSLSKEAIIGLARSTACELGKHGIRVNCISP 588
            F    A++V+ADI +  G A+        +H    D+T E   + AV  AV   G LD++ NNA           + + D   +L VNL G+    KHA K M+   +             +GGL +     AY+ SK  ++ L +S A +  KH IRVNC+ P
Sbjct:   25 FLGQQANVVVADIDEAQGEAMVRKENNDRLHFVQTDITDEAACQHAVESAVHTFGGLDVLINNAGIEIVAPIHE-MELSDWNKVLQVNLTGMFLMSKHALKHMLAAGKGNIINTCS-----VGGLVAWPDIPAYNASKGGVLQLTKSMAVDYAKHQIRVNCVCP 182          
The following BLAST results are available for this feature:
BLAST of CN184673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
Y325_THEMA1.744e-1132.46Uncharacterized oxidoreductase TM_0325 OS=Thermoto... [more]
BACC_BACSU8.658e-1131.10Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005N24_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184673 ID=CN184673; Name=CN184673; organism=Citrus sinensis; type=EST; length=710bp
GAGGACGAAATGGAGGCACGTGATGACACAAACAAGTTATCTTCAAAGAG
ATTGATGGGCAAAGTTGCTTTGATAACTGGCGGAGCAAGAGGGATTGGAG
CAGCCACTGCTAAACTATTTGCGGAGAATGGTGCGCACATTGTCATAGCA
GACATTCTTGATGAACTCGGCGCTGCTCTAGCCGACACAATAGGCGGCCG
GTACATACATTGCGACGTGACAAAGGAAGAAGATGTTGAATCAGCTGTCC
GGCTTGCAGTTTCCTGGAAAGGCCAGTTAGACATAATGTTCAACAATGCT
GGAATTTCTGGCTCTGGAGGCAGCATCACAAGCCTTAACATGGAAGATGT
GAAGTTTCTTCTCTCAGTTAATCTGAATGGCATATTACATGGAATCAAGC
ATGCGGCGAAGGCCATGATCGAAGGCCAGAGAAAAGGCAGTATTATCTGC
AGTTCTAGCTCTGCAGCCATCATGGGCGGCCTTGCATCCCATGCCTATTC
GTTGTCAAAAGAGGCAATCATTGGCTTGGCAAGAAGCACAGCCTGCGAGC
TGGGCAAGCATGGAATTCGAGTGAACTGCATCTCGCCTCATGGAGTTCCT
TCAGAGATGCTTGTGAATGCCTACAGAAAGTACCTGGGGAAAAGCTGATA
TGAAACCTGAAGAAGTGAGCAAGATGGTGGGAGAGAGTGGAAGTTTGCTG
CGTGGGAGGA
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